FFCP PHASE1:Hg19::chr17:25958269..25958280,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3965|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6570|TSSclassifier=S|UniProt=|association_with_transcript=29bp_to_ENST00000467111_5end|coexpression_cluster_id=C3297|description=CAGE_peak_2_at_LGALS9_5end|id=chr17:25958269..25958280,+|ontology_enrichment_celltype=CL:0000037!9.90e-41!172;CL:0000566!9.90e-41!172;CL:0000763!4.49e-40!112;CL:0000049!4.49e-40!112;CL:0002032!4.37e-39!165;CL:0000837!4.37e-39!165;CL:0000738!1.21e-37!140;CL:0000766!1.44e-36!76;CL:0000988!2.72e-36!182;CL:0000557!3.71e-35!71;CL:0000839!1.02e-33!70;CL:0002009!2.46e-33!65;CL:0002031!2.88e-32!124;CL:0002194!7.70e-32!63;CL:0000576!7.70e-32!63;CL:0000040!7.70e-32!63;CL:0000559!7.70e-32!63;CL:0002087!1.01e-29!119;CL:0002057!5.32e-26!42;CL:0000860!6.76e-23!45;CL:0002393!2.94e-08!9;CL:0002397!2.94e-08!9;CL:0000115!2.26e-07!35;CL:0000990!6.62e-07!8|ontology_enrichment_celltype_v019=CL:0000576;8.83e-25;48!CL:0000766;1.34e-22;69!CL:0000473;5.43e-22;39!CL:0000234;5.43e-22;39!CL:0000860;6.19e-20;33!CL:0002057;6.19e-20;33!CL:0000763;4.30e-14;100!CL:0000738;3.00e-09;136!CL:0000235;6.30e-09;6!CL:0002138;9.27e-09;6!CL:0000990;1.09e-08;8!CL:0002393;4.95e-08;6!CL:0002397;4.95e-08;6!CL:0000988;3.35e-07;177!CL:0002087;3.64e-07;104!CL:0000451;9.61e-07;10|ontology_enrichment_celltype_v019_2=CL:0000763,1.14e-54,108;CL:0000049,1.14e-54,108;CL:0000766,3.95e-54,72;CL:0000557,1.49e-51,67;CL:0002009,2.45e-48,61;CL:0000839,3.71e-48,66;CL:0002194,5.23e-46,59;CL:0000576,5.23e-46,59;CL:0000040,5.23e-46,59;CL:0000559,5.23e-46,59;CL:0000473,9.91e-40,48;CL:0000234,9.91e-40,48;CL:0000037,1.77e-38,168;CL:0002032,6.01e-38,161;CL:0000837,6.01e-38,161;CL:0000738,4.06e-37,136;CL:0000988,5.43e-35,177;CL:0000860,1.79e-32,42;CL:0002057,1.79e-32,42;CL:0002031,1.06e-29,120;CL:0002087,5.09e-27,115;CL:0002393,5.26e-12,9;CL:0002397,5.26e-12,9;CL:0000235,7.13e-09,6;CL:0005020,7.52e-09,6;CL:0002138,7.52e-09,6;CL:0005022,7.52e-09,6;CL:0000990,1.26e-08,8;CL:0000115,2.20e-08,36|ontology_enrichment_development_v019=CL:0002057;8.74e-22;42!CL:0000049;2.33e-14;108!CL:0005022;9.27e-09;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!5.84e-38!112;UBERON:0002390!1.34e-33!102;UBERON:0003061!1.34e-33!102;UBERON:0002371!1.76e-29!80;UBERON:0002405!5.30e-29!115;UBERON:0001474!2.68e-25!86;UBERON:0004765!2.04e-18!101;UBERON:0001434!2.04e-18!101;UBERON:0003081!2.98e-16!216;UBERON:0007023!7.89e-14!115;UBERON:0002204!8.99e-07!167|ontology_enrichment_uberon_v019=UBERON:0002465;5.16e-08;10|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.37e-56,108;UBERON:0002405,4.19e-55,93;UBERON:0002390,3.83e-49,98;UBERON:0003061,3.83e-49,98;UBERON:0002371,6.03e-43,76;UBERON:0001474,2.82e-38,82;UBERON:0004765,4.84e-33,90;UBERON:0001434,1.02e-27,100;UBERON:0003081,1.17e-26,203;UBERON:0002204,7.92e-13,167;UBERON:0000926,5.57e-11,315;UBERON:0004120,5.57e-11,315;UBERON:0006603,5.57e-11,315;UBERON:0002465,4.43e-08,10|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0.246242116153576,0,0,0.286235987131057,0,0,3.36218985290986,2.21671591514854,2.51874500203774,6.29382842958246,3.0706351847777,6.03782880932696,0,0,0,0.0774672005803016,0,0.293600439334847,2.76997704265939,2.00544447470142,2.60413044859022,4.70222495903841,4.85840499028469,4.89393578504954,1.89017710413434,3.02300754951048,4.36651310138069,0.697287110717054,1.23350366406548,2.78735733805593,3.16461631554365,4.61089271752381,5.91205574721463,0.689491361473237,0.645484683583826,4.06279459783025,0.752969358170419,1.91034305040492,3.14612878223118,1.53041946185451,2.56743221660875,4.47535988059329,2.63881040149373,5.38551875578406,8.52449501065388,2.03146467040009,0.56738522469114,1.86846674698672,2.51248665256743,4.17186334736161,4.56096573880745,1.81619850790011,2.94622108790052,3.79754864929061,14.7878700418359,12.9688622978677,14.0471292490612,4.83013113929929,3.15371474967163,3.53596290733576,13.6806116995799,20.6873344287054,17.7184229151695,0,0,0,0.426730222566507,0,0,0,0.954053754535364,0,0,0.382273228125229,3.96513985737078,0.560508562981536,1.84368859342554,0.983548850569165,0.786021525498329,0.822405995998037,0.334372990781356,1.62961133316795,0.473447805734733,0,0.222820913770347,0.883817722424512,1.55073726208535,1.08321545506006,0.128091319725675,0.520237390239513,0.822189523018381,0.276350017785848,1.73881851441031,0.296573126324121,0.267540828089713,0,0.339928028092699,1.14966148080576,1.71813722741315,1.77113784413652,0.95569624297229,0.651083453856419,0,0.451725357233318,0.511946444617674,1.24930726552346,0.710331756132051,0,0.201606743224732,0.267440195783507,0.579297615531196,0,1.34140171940727,0.12786256184353,0,0,0,0,0,0.378139268656271,0,0,1.63723844372141,0,0,5.51730569212962,5.22389211897802,9.30705723632056,0.476981248610684,0.571994910780128,0,0.596287222100115,0.860234595106124,0,0,1.25849830862972,0.275118041940067,0.835979866147242,3.87625138753993,6.75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79,0.930896962757057,1.27940389140589,1.1903221573187,1.74390056557216,1.48979314310059,0,0.700118741059814,2.02117188958219,0.653150243690884,1.02669990325584,2.08791364345221,4.37505452895326,1.33064142618405,2.84911440138411,0,0,0.0898252021065869,2.34640942403454,1.22241444182866,0.406896178315738,0,1.61019034872821,3.20568492303233|short_description=p2@LGALS9}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=3965 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6570 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=29bp_to_ENST00000467111_5end | |||
|coexpression_cluster_id=C3297 | |||
|description=CAGE_peak_2_at_LGALS9_5end | |||
|id=chr17:25958269..25958280,+ | |||
|ontology_enrichment_celltype=CL:0000037!9.90e-41!172;CL:0000566!9.90e-41!172;CL:0000763!4.49e-40!112;CL:0000049!4.49e-40!112;CL:0002032!4.37e-39!165;CL:0000837!4.37e-39!165;CL:0000738!1.21e-37!140;CL:0000766!1.44e-36!76;CL:0000988!2.72e-36!182;CL:0000557!3.71e-35!71;CL:0000839!1.02e-33!70;CL:0002009!2.46e-33!65;CL:0002031!2.88e-32!124;CL:0002194!7.70e-32!63;CL:0000576!7.70e-32!63;CL:0000040!7.70e-32!63;CL:0000559!7.70e-32!63;CL:0002087!1.01e-29!119;CL:0002057!5.32e-26!42;CL:0000860!6.76e-23!45;CL:0002393!2.94e-08!9;CL:0002397!2.94e-08!9;CL:0000115!2.26e-07!35;CL:0000990!6.62e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000576;8.83e-25;48!CL:0000766;1.34e-22;69!CL:0000473;5.43e-22;39!CL:0000234;5.43e-22;39!CL:0000860;6.19e-20;33!CL:0002057;6.19e-20;33!CL:0000763;4.30e-14;100!CL:0000738;3.00e-09;136!CL:0000235;6.30e-09;6!CL:0002138;9.27e-09;6!CL:0000990;1.09e-08;8!CL:0002393;4.95e-08;6!CL:0002397;4.95e-08;6!CL:0000988;3.35e-07;177!CL:0002087;3.64e-07;104!CL:0000451;9.61e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,1.14e-54,108;CL:0000049,1.14e-54,108;CL:0000766,3.95e-54,72;CL:0000557,1.49e-51,67;CL:0002009,2.45e-48,61;CL:0000839,3.71e-48,66;CL:0002194,5.23e-46,59;CL:0000576,5.23e-46,59;CL:0000040,5.23e-46,59;CL:0000559,5.23e-46,59;CL:0000473,9.91e-40,48;CL:0000234,9.91e-40,48;CL:0000037,1.77e-38,168;CL:0002032,6.01e-38,161;CL:0000837,6.01e-38,161;CL:0000738,4.06e-37,136;CL:0000988,5.43e-35,177;CL:0000860,1.79e-32,42;CL:0002057,1.79e-32,42;CL:0002031,1.06e-29,120;CL:0002087,5.09e-27,115;CL:0002393,5.26e-12,9;CL:0002397,5.26e-12,9;CL:0000235,7.13e-09,6;CL:0005020,7.52e-09,6;CL:0002138,7.52e-09,6;CL:0005022,7.52e-09,6;CL:0000990,1.26e-08,8;CL:0000115,2.20e-08,36 | |||
|ontology_enrichment_development_v019=CL:0002057;8.74e-22;42!CL:0000049;2.33e-14;108!CL:0005022;9.27e-09;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!5.84e-38!112;UBERON:0002390!1.34e-33!102;UBERON:0003061!1.34e-33!102;UBERON:0002371!1.76e-29!80;UBERON:0002405!5.30e-29!115;UBERON:0001474!2.68e-25!86;UBERON:0004765!2.04e-18!101;UBERON:0001434!2.04e-18!101;UBERON:0003081!2.98e-16!216;UBERON:0007023!7.89e-14!115;UBERON:0002204!8.99e-07!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0002465;5.16e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.37e-56,108;UBERON:0002405,4.19e-55,93;UBERON:0002390,3.83e-49,98;UBERON:0003061,3.83e-49,98;UBERON:0002371,6.03e-43,76;UBERON:0001474,2.82e-38,82;UBERON:0004765,4.84e-33,90;UBERON:0001434,1.02e-27,100;UBERON:0003081,1.17e-26,203;UBERON:0002204,7.92e-13,167;UBERON:0000926,5.57e-11,315;UBERON:0004120,5.57e-11,315;UBERON:0006603,5.57e-11,315;UBERON:0002465,4.43e-08,10 | |||
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| |||
|short_description=p2@LGALS9 | |||
}} |
Revision as of 12:41, 11 September 2013
Short description: | p2@LGALS9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_LGALS9_5end |
Coexpression cluster: | C3297_Monocytederived_CD14CD16_CD14_Macrophage_Dendritic_migratory_splenic |
Association with transcript: | 29bp_to_ENST00000467111_5end |
EntrezGene: | LGALS9 |
HGNC: | 6570 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.37e-56 | 108 |
immune system | 4.19e-55 | 93 |
hematopoietic system | 3.83e-49 | 98 |
blood island | 3.83e-49 | 98 |
bone marrow | 6.03e-43 | 76 |
bone element | 2.82e-38 | 82 |
skeletal element | 4.84e-33 | 90 |
skeletal system | 1.02e-27 | 100 |
lateral plate mesoderm | 1.17e-26 | 203 |
musculoskeletal system | 7.92e-13 | 167 |
mesoderm | 5.57e-11 | 315 |
mesoderm-derived structure | 5.57e-11 | 315 |
presumptive mesoderm | 5.57e-11 | 315 |
lymphoid system | 4.43e-08 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.