FFCP PHASE1:Hg19::chr17:37934392..37934398,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=22806|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=13178|TSSclassifier=S|UniProt=|association_with_transcript=79bp_to_uc010wel.1_5end|coexpression_cluster_id=C18|description=CAGE_peak_11_at_IKZF3_5end|id=chr17:37934392..37934398,-|ontology_enrichment_celltype=CL:0000542!1.13e-42!53;CL:0000051!1.13e-42!53;CL:0000838!3.48e-41!52;CL:0000791!1.27e-32!18;CL:0000789!1.27e-32!18;CL:0002420!1.27e-32!18;CL:0002419!1.27e-32!18;CL:0000790!1.27e-32!18;CL:0000084!9.49e-28!25;CL:0000827!9.49e-28!25;CL:0000625!1.82e-23!11;CL:0002087!7.31e-22!119;CL:0000738!6.41e-18!140;CL:0002031!5.41e-16!124;CL:0000037!3.37e-13!172;CL:0000566!3.37e-13!172;CL:0000988!1.46e-12!182;CL:0002032!9.75e-12!165;CL:0000837!9.75e-12!165;CL:0000945!2.74e-11!24;CL:0000826!2.74e-11!24;CL:0000624!2.34e-09!6;CL:0000898!1.84e-07!3;CL:0000623!4.59e-07!3;CL:0000825!4.59e-07!3;CL:0000842!8.90e-07!3|ontology_enrichment_celltype_v019=CL:0000625;4.86e-31;11!CL:0000791;2.06e-24;18!CL:0000789;2.06e-24;18!CL:0002419;2.06e-24;18!CL:0000084;9.14e-22;25|ontology_enrichment_celltype_v019_2=CL:0000625,3.24e-31,11;CL:0000791,1.56e-24,18;CL:0000789,1.56e-24,18;CL:0002420,1.56e-24,18;CL:0002419,1.56e-24,18;CL:0000790,1.56e-24,18;CL:0000084,6.60e-22,25;CL:0000827,6.60e-22,25;CL:0000838,8.15e-10,52;CL:0000542,1.33e-09,53;CL:0000051,1.33e-09,53|ontology_enrichment_development_v019=CL:0000790;2.06e-24;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000178!1.56e-15!15;UBERON:0000179!1.56e-15!15;UBERON:0000463!1.56e-15!15;UBERON:0004177!6.89e-11!7;UBERON:0002370!2.11e-09!4;UBERON:0005058!2.11e-09!4;UBERON:0009113!2.11e-09!4;UBERON:0003295!2.11e-09!4;UBERON:0005562!2.11e-09!4;UBERON:0007023!2.52e-08!115|ontology_enrichment_uberon_v019=UBERON:0002370;5.98e-16;2!UBERON:0005058;5.98e-16;2!UBERON:0009113;5.98e-16;2!UBERON:0004177;9.80e-14;5!UBERON:0005057;9.80e-14;5!UBERON:0000178;1.09e-11;15!UBERON:0000179;1.09e-11;15!UBERON:0000463;1.09e-11;15!UBERON:0002390;1.21e-11;32|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.05e-11,15;UBERON:0000179,1.05e-11,15;UBERON:0000463,1.05e-11,15;UBERON:0004177,6.25e-10,7;UBERON:0005057,6.25e-10,7;UBERON:0002370,1.91e-08,4;UBERON:0005058,1.91e-08,4;UBERON:0009113,1.91e-08,4;UBERON:0003295,1.91e-08,4;UBERON:0005562,1.91e-08,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.0821005894499457,0.629686250509434,0,1.53531759238885,0,0,0,0,0.309868802321207,0,0,0,0.200544447470142,0.217010870715852,0,0.32389366601898,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0.800791974072025,0,0,0,0,0,0.382273228125229,0,0,0,0.983548850569165,0,0.822405995998037,2.17342444007882,0.977766799900771,0.473447805734733,5.84480185223734,2.56244050835899,3.24066498222321,3.1014745241707,4.33286182024025,3.33037431286755,2.9913649938772,0.164437904603676,0,0.289803085735052,0.593146252648242,0.535081656179426,1.04535523804977,1.35971211237079,0.383220493601921,0.68725489096526,1.01207876807801,1.27426165729639,4.55758417699493,0.950452044448374,1.80690142893327,3.19966527886046,3.74792179657038,1.65744076430812,1.64225599384209,0.604820229674197,0.267440195783507,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336255431980582,0.394061520403854,0.646882724578552,0.641715181398742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.431428401637234,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0.764637207142375,0,2.1440859791201,1.23408681925858,1.94541993357815,3.24018862342869,1.58625035258854,0,0,0,0.185803175125719,0,1.77854608371035,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0.828851746593443,0,0,0.492339221844278,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,0.067401132980677,0,0,0.182454789215666,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0,0,0.395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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=22806 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13178 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=79bp_to_uc010wel.1_5end | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_11_at_IKZF3_5end | |||
|id=chr17:37934392..37934398,- | |||
|ontology_enrichment_celltype=CL:0000542!1.13e-42!53;CL:0000051!1.13e-42!53;CL:0000838!3.48e-41!52;CL:0000791!1.27e-32!18;CL:0000789!1.27e-32!18;CL:0002420!1.27e-32!18;CL:0002419!1.27e-32!18;CL:0000790!1.27e-32!18;CL:0000084!9.49e-28!25;CL:0000827!9.49e-28!25;CL:0000625!1.82e-23!11;CL:0002087!7.31e-22!119;CL:0000738!6.41e-18!140;CL:0002031!5.41e-16!124;CL:0000037!3.37e-13!172;CL:0000566!3.37e-13!172;CL:0000988!1.46e-12!182;CL:0002032!9.75e-12!165;CL:0000837!9.75e-12!165;CL:0000945!2.74e-11!24;CL:0000826!2.74e-11!24;CL:0000624!2.34e-09!6;CL:0000898!1.84e-07!3;CL:0000623!4.59e-07!3;CL:0000825!4.59e-07!3;CL:0000842!8.90e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000625;4.86e-31;11!CL:0000791;2.06e-24;18!CL:0000789;2.06e-24;18!CL:0002419;2.06e-24;18!CL:0000084;9.14e-22;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,3.24e-31,11;CL:0000791,1.56e-24,18;CL:0000789,1.56e-24,18;CL:0002420,1.56e-24,18;CL:0002419,1.56e-24,18;CL:0000790,1.56e-24,18;CL:0000084,6.60e-22,25;CL:0000827,6.60e-22,25;CL:0000838,8.15e-10,52;CL:0000542,1.33e-09,53;CL:0000051,1.33e-09,53 | |||
|ontology_enrichment_development_v019=CL:0000790;2.06e-24;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.56e-15!15;UBERON:0000179!1.56e-15!15;UBERON:0000463!1.56e-15!15;UBERON:0004177!6.89e-11!7;UBERON:0002370!2.11e-09!4;UBERON:0005058!2.11e-09!4;UBERON:0009113!2.11e-09!4;UBERON:0003295!2.11e-09!4;UBERON:0005562!2.11e-09!4;UBERON:0007023!2.52e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;5.98e-16;2!UBERON:0005058;5.98e-16;2!UBERON:0009113;5.98e-16;2!UBERON:0004177;9.80e-14;5!UBERON:0005057;9.80e-14;5!UBERON:0000178;1.09e-11;15!UBERON:0000179;1.09e-11;15!UBERON:0000463;1.09e-11;15!UBERON:0002390;1.21e-11;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.05e-11,15;UBERON:0000179,1.05e-11,15;UBERON:0000463,1.05e-11,15;UBERON:0004177,6.25e-10,7;UBERON:0005057,6.25e-10,7;UBERON:0002370,1.91e-08,4;UBERON:0005058,1.91e-08,4;UBERON:0009113,1.91e-08,4;UBERON:0003295,1.91e-08,4;UBERON:0005562,1.91e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.0821005894499457,0.629686250509434,0,1.53531759238885,0,0,0,0,0.309868802321207,0,0,0,0.200544447470142,0.217010870715852,0,0.32389366601898,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0.800791974072025,0,0,0,0,0,0.382273228125229,0,0,0,0.983548850569165,0,0.822405995998037,2.17342444007882,0.977766799900771,0.473447805734733,5.84480185223734,2.56244050835899,3.24066498222321,3.1014745241707,4.33286182024025,3.33037431286755,2.9913649938772,0.164437904603676,0,0.289803085735052,0.593146252648242,0.535081656179426,1.04535523804977,1.35971211237079,0.383220493601921,0.68725489096526,1.01207876807801,1.27426165729639,4.55758417699493,0.950452044448374,1.80690142893327,3.19966527886046,3.74792179657038,1.65744076430812,1.64225599384209,0.604820229674197,0.267440195783507,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336255431980582,0.394061520403854,0.646882724578552,0.641715181398742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.431428401637234,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0.764637207142375,0,2.1440859791201,1.23408681925858,1.94541993357815,3.24018862342869,1.58625035258854,0,0,0,0.185803175125719,0,1.77854608371035,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0.828851746593443,0,0,0.492339221844278,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,0.067401132980677,0,0,0.182454789215666,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0,0,0.395223263795889,0.243585196761792,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.861074898304078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0.227662191351298,0.177404740325278,0.230467975111559,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463044948647668,0,0,0,0,0,0,0,0,1.2217909337381,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,3.93992349999637,4.2831552864142,0,0,0,0,0,0.942928742204225,0,0,0,0,0,0,0,0,0,0,0.805095174364105,0.641136984606466 | |||
|short_description=p11@IKZF3 | |||
}} |
Revision as of 13:20, 11 September 2013
Short description: | p11@IKZF3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_IKZF3_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 79bp_to_uc010wel.1_5end |
EntrezGene: | IKZF3 |
HGNC: | 13178 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 3.24e-31 | 11 |
mature alpha-beta T cell | 1.56e-24 | 18 |
alpha-beta T cell | 1.56e-24 | 18 |
immature T cell | 1.56e-24 | 18 |
mature T cell | 1.56e-24 | 18 |
immature alpha-beta T cell | 1.56e-24 | 18 |
T cell | 6.60e-22 | 25 |
pro-T cell | 6.60e-22 | 25 |
lymphoid lineage restricted progenitor cell | 8.15e-10 | 52 |
lymphocyte | 1.33e-09 | 53 |
common lymphoid progenitor | 1.33e-09 | 53 |
Ontology term | p-value | n |
---|---|---|
blood | 1.05e-11 | 15 |
haemolymphatic fluid | 1.05e-11 | 15 |
organism substance | 1.05e-11 | 15 |
hemopoietic organ | 6.25e-10 | 7 |
immune organ | 6.25e-10 | 7 |
thymus | 1.91e-08 | 4 |
hemolymphoid system gland | 1.91e-08 | 4 |
thymic region | 1.91e-08 | 4 |
pharyngeal gland | 1.91e-08 | 4 |
thymus primordium | 1.91e-08 | 4 |
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