FFCP PHASE1:Hg19::chr19:22398533..22398542,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=163223|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C45|description=CAGE_peak_2_at_ZNF676_5end|id=chr19:22398533..22398542,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000039;2.47e-13;7!CL:0000586;2.47e-13;7|ontology_enrichment_celltype_v019_2=CL:0000039,2.47e-13,7;CL:0000586,2.47e-13,7|ontology_enrichment_development_v019=UBERON:0009117;3.39e-24;10!UBERON:0005564;3.39e-24;10!UBERON:0010226;1.15e-10;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3908;1.37e-08;5|ontology_enrichment_disease_v019_2=DOID:3908,1.66e-08,5;DOID:305,1.34e-07,106|ontology_enrichment_uberon=UBERON:0007023!9.39e-37!115;UBERON:0001049!7.85e-15!57;UBERON:0005068!7.85e-15!57;UBERON:0006241!7.85e-15!57;UBERON:0007135!7.85e-15!57;UBERON:0003075!2.42e-14!86;UBERON:0007284!2.42e-14!86;UBERON:0002346!2.63e-13!90;UBERON:0002298!4.27e-13!8;UBERON:0002616!8.54e-13!59;UBERON:0000955!7.41e-12!69;UBERON:0006238!7.41e-12!69;UBERON:0001017!1.22e-11!82;UBERON:0005743!1.32e-11!86;UBERON:0003080!2.13e-11!42;UBERON:0002780!2.35e-10!41;UBERON:0001890!2.35e-10!41;UBERON:0006240!2.35e-10!41;UBERON:0001894!6.40e-10!7;UBERON:0006222!6.40e-10!7;UBERON:0000073!8.92e-10!94;UBERON:0001016!8.92e-10!94;UBERON:0003296!8.66e-09!4;UBERON:0010133!8.66e-09!4;UBERON:0002308!1.71e-08!9;UBERON:0000125!1.71e-08!9;UBERON:0003056!3.68e-07!61;UBERON:0003978!4.22e-07!3;UBERON:0009751!4.22e-07!3;UBERON:0000946!4.22e-07!3;UBERON:0002523!4.22e-07!3;UBERON:0005983!4.22e-07!3;UBERON:0002165!4.22e-07!3;UBERON:0002062!4.22e-07!3;UBERON:0007280!4.22e-07!3;UBERON:0000473!6.74e-07!8|ontology_enrichment_uberon_v019=UBERON:0000473;3.05e-30;8!UBERON:0003296;5.15e-22;4!UBERON:0010133;5.15e-22;4!UBERON:0003135;5.39e-22;11!UBERON:0001905;3.02e-20;2!UBERON:0002757;3.02e-20;2!UBERON:0010134;3.02e-20;2!UBERON:0005408;3.02e-20;2!UBERON:0001899;3.02e-20;2!UBERON:0001894;7.61e-13;7!UBERON:0000991;1.77e-11;21!UBERON:0003101;5.97e-11;22!UBERON:0000079;5.97e-11;22!UBERON:0002084;1.15e-10;1!UBERON:0002135;1.15e-10;1!UBERON:0001282;1.15e-10;1!UBERON:0009842;1.15e-10;1!UBERON:0003704;1.15e-10;1!UBERON:0002082;1.15e-10;1!UBERON:0001171;1.15e-10;1!UBERON:0001172;1.15e-10;1!UBERON:0002784;1.33e-10;4!UBERON:0002368;7.58e-09;33|ontology_enrichment_uberon_v019_2=UBERON:0000473,3.44e-30,8;UBERON:0003296,5.74e-22,4;UBERON:0010133,5.74e-22,4;UBERON:0003135,5.89e-22,11;UBERON:0001905,3.02e-20,2;UBERON:0002757,3.02e-20,2;UBERON:0010134,3.02e-20,2;UBERON:0005408,3.02e-20,2;UBERON:0001899,3.02e-20,2;UBERON:0001894,8.09e-13,7;UBERON:0006222,8.09e-13,7;UBERON:0000991,1.85e-11,21;UBERON:0009196,1.85e-11,21;UBERON:0009117,1.85e-11,21;UBERON:0005564,1.85e-11,21;UBERON:0004176,6.23e-11,22;UBERON:0003101,6.23e-11,22;UBERON:0000079,6.23e-11,22;UBERON:0001282,8.22e-11,1;UBERON:0009842,8.22e-11,1;UBERON:0003704,8.22e-11,1;UBERON:0001171,8.22e-11,1;UBERON:0001172,8.22e-11,1;UBERON:0002135,9.05e-11,1;UBERON:0002084,1.10e-10,1;UBERON:0002082,1.10e-10,1;UBERON:0010226,1.10e-10,1;UBERON:0002784,1.33e-10,4;UBERON:0002368,2.12e-09,35;UBERON:0000949,3.28e-07,45;UBERON:0002323,4.02e-07,46|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785874452986276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488124115096339,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08182271390393,0,0,0,0.146508179271894,0,0.780103689942349,0,0.23874448473769,0.593929361665277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,1.01701460117107,0,0,0,0,0,0.120596438625408,0,0,0,0.219385397153973,0,0,0.230850775511391,1.59518878185802,0,0,0.217294743844016,0,0,0.533034776018635,0,0,0.332423363800313,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.202203398942031,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0.51595809741485,0,0,0,0.0969890164884194,0,0,0,0.19871461170299,0.126621591911757,1.36885967914362,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=163223 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C45 | |||
|description=CAGE_peak_2_at_ZNF676_5end | |||
|id=chr19:22398533..22398542,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000039;2.47e-13;7!CL:0000586;2.47e-13;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,2.47e-13,7;CL:0000586,2.47e-13,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.39e-24;10!UBERON:0005564;3.39e-24;10!UBERON:0010226;1.15e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3908;1.37e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:3908,1.66e-08,5;DOID:305,1.34e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0007023!9.39e-37!115;UBERON:0001049!7.85e-15!57;UBERON:0005068!7.85e-15!57;UBERON:0006241!7.85e-15!57;UBERON:0007135!7.85e-15!57;UBERON:0003075!2.42e-14!86;UBERON:0007284!2.42e-14!86;UBERON:0002346!2.63e-13!90;UBERON:0002298!4.27e-13!8;UBERON:0002616!8.54e-13!59;UBERON:0000955!7.41e-12!69;UBERON:0006238!7.41e-12!69;UBERON:0001017!1.22e-11!82;UBERON:0005743!1.32e-11!86;UBERON:0003080!2.13e-11!42;UBERON:0002780!2.35e-10!41;UBERON:0001890!2.35e-10!41;UBERON:0006240!2.35e-10!41;UBERON:0001894!6.40e-10!7;UBERON:0006222!6.40e-10!7;UBERON:0000073!8.92e-10!94;UBERON:0001016!8.92e-10!94;UBERON:0003296!8.66e-09!4;UBERON:0010133!8.66e-09!4;UBERON:0002308!1.71e-08!9;UBERON:0000125!1.71e-08!9;UBERON:0003056!3.68e-07!61;UBERON:0003978!4.22e-07!3;UBERON:0009751!4.22e-07!3;UBERON:0000946!4.22e-07!3;UBERON:0002523!4.22e-07!3;UBERON:0005983!4.22e-07!3;UBERON:0002165!4.22e-07!3;UBERON:0002062!4.22e-07!3;UBERON:0007280!4.22e-07!3;UBERON:0000473!6.74e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;3.05e-30;8!UBERON:0003296;5.15e-22;4!UBERON:0010133;5.15e-22;4!UBERON:0003135;5.39e-22;11!UBERON:0001905;3.02e-20;2!UBERON:0002757;3.02e-20;2!UBERON:0010134;3.02e-20;2!UBERON:0005408;3.02e-20;2!UBERON:0001899;3.02e-20;2!UBERON:0001894;7.61e-13;7!UBERON:0000991;1.77e-11;21!UBERON:0003101;5.97e-11;22!UBERON:0000079;5.97e-11;22!UBERON:0002084;1.15e-10;1!UBERON:0002135;1.15e-10;1!UBERON:0001282;1.15e-10;1!UBERON:0009842;1.15e-10;1!UBERON:0003704;1.15e-10;1!UBERON:0002082;1.15e-10;1!UBERON:0001171;1.15e-10;1!UBERON:0001172;1.15e-10;1!UBERON:0002784;1.33e-10;4!UBERON:0002368;7.58e-09;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,3.44e-30,8;UBERON:0003296,5.74e-22,4;UBERON:0010133,5.74e-22,4;UBERON:0003135,5.89e-22,11;UBERON:0001905,3.02e-20,2;UBERON:0002757,3.02e-20,2;UBERON:0010134,3.02e-20,2;UBERON:0005408,3.02e-20,2;UBERON:0001899,3.02e-20,2;UBERON:0001894,8.09e-13,7;UBERON:0006222,8.09e-13,7;UBERON:0000991,1.85e-11,21;UBERON:0009196,1.85e-11,21;UBERON:0009117,1.85e-11,21;UBERON:0005564,1.85e-11,21;UBERON:0004176,6.23e-11,22;UBERON:0003101,6.23e-11,22;UBERON:0000079,6.23e-11,22;UBERON:0001282,8.22e-11,1;UBERON:0009842,8.22e-11,1;UBERON:0003704,8.22e-11,1;UBERON:0001171,8.22e-11,1;UBERON:0001172,8.22e-11,1;UBERON:0002135,9.05e-11,1;UBERON:0002084,1.10e-10,1;UBERON:0002082,1.10e-10,1;UBERON:0010226,1.10e-10,1;UBERON:0002784,1.33e-10,4;UBERON:0002368,2.12e-09,35;UBERON:0000949,3.28e-07,45;UBERON:0002323,4.02e-07,46 | |||
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|short_description=p2@ZNF676 | |||
}} |
Revision as of 19:43, 11 September 2013
Short description: | p2@ZNF676 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_ZNF676_5end |
Coexpression cluster: | C45_testicular_choriocarcinoma_H9_teratocarcinoma_Wilms_pancreatic_iPS |
Association with transcript: | NA |
EntrezGene: | ZNF676 |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 2.47e-13 | 7 |
germ cell | 2.47e-13 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 3.44e-30 | 8 |
gland of diencephalon | 5.74e-22 | 4 |
neuroendocrine gland | 5.74e-22 | 4 |
male reproductive organ | 5.89e-22 | 11 |
pineal body | 3.02e-20 | 2 |
regional part of epithalamus | 3.02e-20 | 2 |
secretory circumventricular organ | 3.02e-20 | 2 |
circumventricular organ | 3.02e-20 | 2 |
epithalamus | 3.02e-20 | 2 |
diencephalon | 8.09e-13 | 7 |
future diencephalon | 8.09e-13 | 7 |
gonad | 1.85e-11 | 21 |
indifferent external genitalia | 1.85e-11 | 21 |
indifferent gonad | 1.85e-11 | 21 |
gonad primordium | 1.85e-11 | 21 |
external genitalia | 6.23e-11 | 22 |
male organism | 6.23e-11 | 22 |
male reproductive system | 6.23e-11 | 22 |
intralobular bile duct | 8.22e-11 | 1 |
acinus | 8.22e-11 | 1 |
intrahepatic bile duct | 8.22e-11 | 1 |
portal lobule | 8.22e-11 | 1 |
hepatic acinus | 8.22e-11 | 1 |
mitral valve | 9.05e-11 | 1 |
heart left ventricle | 1.10e-10 | 1 |
cardiac ventricle | 1.10e-10 | 1 |
future cardiac ventricle | 1.10e-10 | 1 |
regional part of diencephalon | 1.33e-10 | 4 |
endocrine gland | 2.12e-09 | 35 |
endocrine system | 3.28e-07 | 45 |
body cavity | 4.02e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
non-small cell lung carcinoma | 1.66e-08 | 5 |
carcinoma | 1.34e-07 | 106 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.