FFCP PHASE1:Hg19::chr19:6062331..6062346,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C82|description=CAGE_peak_at_chr19:6062331..6062346,-|id=chr19:6062331..6062346,-|ontology_enrichment_celltype=CL:0002057!1.19e-71!42;CL:0000860!3.87e-66!45;CL:0000766!4.42e-57!76;CL:0000557!2.83e-55!71;CL:0002009!3.88e-52!65;CL:0000839!1.15e-50!70;CL:0002194!2.00e-48!63;CL:0000576!2.00e-48!63;CL:0000040!2.00e-48!63;CL:0000559!2.00e-48!63;CL:0000763!3.10e-44!112;CL:0000049!3.10e-44!112;CL:0000738!3.95e-41!140;CL:0000037!1.12e-33!172;CL:0000566!1.12e-33!172;CL:0000988!2.43e-32!182;CL:0002031!4.08e-31!124;CL:0002032!1.22e-29!165;CL:0000837!1.22e-29!165;CL:0002087!1.82e-29!119;CL:0002393!2.58e-17!9;CL:0002397!2.58e-17!9;CL:0000134!1.04e-14!358;CL:0002320!4.04e-14!365;CL:0000219!4.75e-12!390;CL:0000034!1.19e-10!444;CL:0000048!3.64e-10!430;CL:0000723!8.30e-10!436;CL:0000767!2.30e-09!3;CL:0000842!3.98e-08!3;CL:0000453!8.65e-08!5|ontology_enrichment_celltype_v019=CL:0000860;4.22e-49;33!CL:0002057;4.22e-49;33!CL:0000473;3.06e-34;39!CL:0000234;3.06e-34;39!CL:0000576;9.53e-33;48!CL:0000766;2.00e-27;69!CL:0000767;1.06e-24;3!CL:0002393;3.26e-12;6!CL:0002397;3.26e-12;6!CL:0000763;2.64e-10;100!CL:0000094;1.33e-09;8!CL:0000081;4.18e-07;11!CL:0000097;5.47e-07;5|ontology_enrichment_celltype_v019_2=CL:0000860,4.17e-56,42;CL:0002057,4.17e-56,42;CL:0000766,3.91e-52,72;CL:0000473,1.06e-48,48;CL:0000234,1.06e-48,48;CL:0000839,2.61e-42,66;CL:0000557,1.23e-41,67;CL:0002194,2.50e-38,59;CL:0000576,2.50e-38,59;CL:0000040,2.50e-38,59;CL:0000559,2.50e-38,59;CL:0002009,5.46e-37,61;CL:0000763,1.08e-33,108;CL:0000049,1.08e-33,108;CL:0000738,1.37e-28,136;CL:0000767,1.11e-24,3;CL:0000037,1.93e-22,168;CL:0002031,7.22e-22,120;CL:0002032,2.02e-21,161;CL:0000837,2.02e-21,161;CL:0000988,4.15e-21,177;CL:0002087,1.54e-20,115;CL:0000094,1.35e-09,8;CL:0000134,1.50e-08,354;CL:0002320,2.64e-08,361;CL:0002393,3.38e-08,9;CL:0002397,3.38e-08,9;CL:0000034,9.95e-08,441;CL:0000219,1.96e-07,386;CL:0000081,4.23e-07,11;CL:0000097,6.37e-07,5;CL:0002028,6.37e-07,5|ontology_enrichment_development_v019=CL:0002057;1.16e-42;42!CL:0000049;1.43e-09;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!2.65e-50!80;UBERON:0002390!1.04e-49!102;UBERON:0003061!1.04e-49!102;UBERON:0002193!5.31e-46!112;UBERON:0001474!5.95e-46!86;UBERON:0004765!2.51e-37!101;UBERON:0001434!2.51e-37!101;UBERON:0002405!2.47e-36!115;UBERON:0003081!3.04e-20!216;UBERON:0002204!7.52e-18!167;UBERON:0002384!2.57e-13!375|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.28e-36,76;UBERON:0001474,1.73e-33,82;UBERON:0002390,1.52e-30,98;UBERON:0003061,1.52e-30,98;UBERON:0004765,3.08e-30,90;UBERON:0002405,3.67e-29,93;UBERON:0002193,2.07e-27,108;UBERON:0001434,6.74e-27,100;UBERON:0002204,9.55e-15,167;UBERON:0003081,6.39e-13,203;UBERON:0002384,5.74e-08,371;UBERON:0000926,5.49e-07,315;UBERON:0004120,5.49e-07,315;UBERON:0006603,5.49e-07,315|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.93364276848904,2.30297638858328,6.34746105595912,0,0,0,0,0,0.587200878669695,4.9859586767869,1.20326668482085,0.868043482863407,0,0,0,0.436194716338694,0.377875943688809,1.4555043671269,3.0215774797739,1.23350366406548,1.54853185447552,0.28769239232215,1.0246428261164,1.41889337933151,2.06847408441971,0.645484683583826,6.77132432971709,1.31769637679823,1.91034305040492,0.674170453335254,0.612167784741805,1.60464513538047,0,0.329851300186716,2.79249120670285,2.55734850319616,0.290209238628584,0,0,1.7587406567972,0,1.3031330682307,0,0.368277635987565,0.316462387440884,1.05627643155971,0.637812899895131,0.838634582033504,0.673971786878971,0.450530678524519,0.64290234678832,0.285012743741249,0,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,1.12101712596307,0,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0.238490624305342,0,0,0.198762407366705,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.710019185033229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,1.4512968087854,0.432359860250884,1.00993946741104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24060815673732,0.431428401637234,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1882876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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C82 | |||
|description=CAGE_peak_at_chr19:6062331..6062346,- | |||
|id=chr19:6062331..6062346,- | |||
|ontology_enrichment_celltype=CL:0002057!1.19e-71!42;CL:0000860!3.87e-66!45;CL:0000766!4.42e-57!76;CL:0000557!2.83e-55!71;CL:0002009!3.88e-52!65;CL:0000839!1.15e-50!70;CL:0002194!2.00e-48!63;CL:0000576!2.00e-48!63;CL:0000040!2.00e-48!63;CL:0000559!2.00e-48!63;CL:0000763!3.10e-44!112;CL:0000049!3.10e-44!112;CL:0000738!3.95e-41!140;CL:0000037!1.12e-33!172;CL:0000566!1.12e-33!172;CL:0000988!2.43e-32!182;CL:0002031!4.08e-31!124;CL:0002032!1.22e-29!165;CL:0000837!1.22e-29!165;CL:0002087!1.82e-29!119;CL:0002393!2.58e-17!9;CL:0002397!2.58e-17!9;CL:0000134!1.04e-14!358;CL:0002320!4.04e-14!365;CL:0000219!4.75e-12!390;CL:0000034!1.19e-10!444;CL:0000048!3.64e-10!430;CL:0000723!8.30e-10!436;CL:0000767!2.30e-09!3;CL:0000842!3.98e-08!3;CL:0000453!8.65e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.22e-49;33!CL:0002057;4.22e-49;33!CL:0000473;3.06e-34;39!CL:0000234;3.06e-34;39!CL:0000576;9.53e-33;48!CL:0000766;2.00e-27;69!CL:0000767;1.06e-24;3!CL:0002393;3.26e-12;6!CL:0002397;3.26e-12;6!CL:0000763;2.64e-10;100!CL:0000094;1.33e-09;8!CL:0000081;4.18e-07;11!CL:0000097;5.47e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.17e-56,42;CL:0002057,4.17e-56,42;CL:0000766,3.91e-52,72;CL:0000473,1.06e-48,48;CL:0000234,1.06e-48,48;CL:0000839,2.61e-42,66;CL:0000557,1.23e-41,67;CL:0002194,2.50e-38,59;CL:0000576,2.50e-38,59;CL:0000040,2.50e-38,59;CL:0000559,2.50e-38,59;CL:0002009,5.46e-37,61;CL:0000763,1.08e-33,108;CL:0000049,1.08e-33,108;CL:0000738,1.37e-28,136;CL:0000767,1.11e-24,3;CL:0000037,1.93e-22,168;CL:0002031,7.22e-22,120;CL:0002032,2.02e-21,161;CL:0000837,2.02e-21,161;CL:0000988,4.15e-21,177;CL:0002087,1.54e-20,115;CL:0000094,1.35e-09,8;CL:0000134,1.50e-08,354;CL:0002320,2.64e-08,361;CL:0002393,3.38e-08,9;CL:0002397,3.38e-08,9;CL:0000034,9.95e-08,441;CL:0000219,1.96e-07,386;CL:0000081,4.23e-07,11;CL:0000097,6.37e-07,5;CL:0002028,6.37e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;1.16e-42;42!CL:0000049;1.43e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.65e-50!80;UBERON:0002390!1.04e-49!102;UBERON:0003061!1.04e-49!102;UBERON:0002193!5.31e-46!112;UBERON:0001474!5.95e-46!86;UBERON:0004765!2.51e-37!101;UBERON:0001434!2.51e-37!101;UBERON:0002405!2.47e-36!115;UBERON:0003081!3.04e-20!216;UBERON:0002204!7.52e-18!167;UBERON:0002384!2.57e-13!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.28e-36,76;UBERON:0001474,1.73e-33,82;UBERON:0002390,1.52e-30,98;UBERON:0003061,1.52e-30,98;UBERON:0004765,3.08e-30,90;UBERON:0002405,3.67e-29,93;UBERON:0002193,2.07e-27,108;UBERON:0001434,6.74e-27,100;UBERON:0002204,9.55e-15,167;UBERON:0003081,6.39e-13,203;UBERON:0002384,5.74e-08,371;UBERON:0000926,5.49e-07,315;UBERON:0004120,5.49e-07,315;UBERON:0006603,5.49e-07,315 | |||
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|short_description=p@chr19:6062331..6062346,- | |||
}} |
Revision as of 22:42, 11 September 2013
Short description: | p@chr19:6062331..6062346, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:6062331..6062346, - |
Coexpression cluster: | C82_Basophils_CD14_Eosinophils_Natural_Peripheral_immature_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.28e-36 | 76 |
bone element | 1.73e-33 | 82 |
hematopoietic system | 1.52e-30 | 98 |
blood island | 1.52e-30 | 98 |
skeletal element | 3.08e-30 | 90 |
immune system | 3.67e-29 | 93 |
hemolymphoid system | 2.07e-27 | 108 |
skeletal system | 6.74e-27 | 100 |
musculoskeletal system | 9.55e-15 | 167 |
lateral plate mesoderm | 6.39e-13 | 203 |
connective tissue | 5.74e-08 | 371 |
mesoderm | 5.49e-07 | 315 |
mesoderm-derived structure | 5.49e-07 | 315 |
presumptive mesoderm | 5.49e-07 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.