FFCP PHASE1:Hg19::chr1:200638744..200638765,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=109bp_to_ENST00000422640_5end|coexpression_cluster_id=C686|description=CAGE_peak_1_at_ENST00000422640_5end|id=chr1:200638744..200638765,+|ontology_enrichment_celltype=CL:0000738!7.85e-29!140;CL:0000766!2.24e-28!76;CL:0002057!6.65e-28!42;CL:0000557!3.79e-27!71;CL:0000037!1.84e-26!172;CL:0000566!1.84e-26!172;CL:0000839!4.05e-26!70;CL:0000988!6.14e-26!182;CL:0000860!1.04e-25!45;CL:0002009!1.73e-25!65;CL:0002031!1.73e-24!124;CL:0002194!3.05e-24!63;CL:0000576!3.05e-24!63;CL:0000040!3.05e-24!63;CL:0000559!3.05e-24!63;CL:0002032!5.69e-24!165;CL:0000837!5.69e-24!165;CL:0000763!5.88e-24!112;CL:0000049!5.88e-24!112;CL:0002087!9.53e-23!119;CL:0002320!3.27e-17!365;CL:0000134!1.80e-16!358;CL:0000219!1.72e-13!390;CL:0000048!2.84e-13!430;CL:0000034!1.16e-12!444;CL:0000723!2.33e-12!436;CL:0000003!3.35e-07!722;CL:0002393!4.05e-07!9;CL:0002397!4.05e-07!9|ontology_enrichment_celltype_v019=CL:0000860;6.28e-43;33!CL:0002057;6.28e-43;33!CL:0000473;4.49e-32;39!CL:0000234;4.49e-32;39!CL:0000576;8.36e-32;48!CL:0000766;3.77e-26;69!CL:0002087;2.30e-13;104!CL:0000763;1.40e-11;100!CL:0000738;5.08e-11;136!CL:0002393;1.76e-10;6!CL:0002397;1.76e-10;6!CL:0000624;8.68e-08;6!CL:0000988;1.57e-07;177!CL:0000094;5.52e-07;8!CL:0000219;9.37e-07;193|ontology_enrichment_celltype_v019_2=CL:0000860,1.24e-60,42;CL:0002057,1.24e-60,42;CL:0000473,2.08e-56,48;CL:0000234,2.08e-56,48;CL:0000766,4.14e-54,72;CL:0000557,7.08e-52,67;CL:0000738,5.40e-51,136;CL:0000839,4.40e-48,66;CL:0002009,5.51e-47,61;CL:0002194,3.38e-44,59;CL:0000576,3.38e-44,59;CL:0000040,3.38e-44,59;CL:0000559,3.38e-44,59;CL:0000037,6.05e-43,168;CL:0002031,1.55e-42,120;CL:0000988,1.72e-39,177;CL:0002087,7.12e-39,115;CL:0000763,1.26e-38,108;CL:0000049,1.26e-38,108;CL:0002032,3.30e-37,161;CL:0000837,3.30e-37,161;CL:0000134,1.29e-24,354;CL:0002320,1.44e-23,361;CL:0000219,1.30e-20,386;CL:0000048,2.29e-17,427;CL:0000034,2.73e-17,441;CL:0000723,1.01e-16,433;CL:0002393,2.11e-14,9;CL:0002397,2.11e-14,9;CL:0000624,2.20e-08,6;CL:0000094,5.69e-07,8|ontology_enrichment_development_v019=CL:0002057;4.98e-43;42!CL:0000049;1.09e-11;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!1.29e-24!80;UBERON:0002390!3.14e-22!102;UBERON:0003061!3.14e-22!102;UBERON:0001474!1.29e-21!86;UBERON:0002193!2.71e-17!112;UBERON:0002384!3.00e-17!375;UBERON:0004765!7.66e-16!101;UBERON:0001434!7.66e-16!101;UBERON:0002405!1.17e-14!115;UBERON:0003081!1.53e-11!216;UBERON:0002204!2.31e-08!167|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.95e-49,76;UBERON:0001474,1.65e-44,82;UBERON:0002390,1.51e-42,98;UBERON:0003061,1.51e-42,98;UBERON:0004765,5.69e-39,90;UBERON:0002405,7.35e-39,93;UBERON:0002193,7.80e-37,108;UBERON:0001434,2.60e-33,100;UBERON:0002384,8.20e-23,371;UBERON:0003081,6.19e-20,203;UBERON:0002204,1.27e-15,167;UBERON:0000926,1.04e-09,315;UBERON:0004120,1.04e-09,315;UBERON:0006603,1.04e-09,315|phase1_expression=0.363356758541113,0.214100523890983,0,0,0.446961094427288,1.74467704820074,0,0,0,0,1.39560233594486,0,0.263766978228454,0.247532705920093,0.662794751455832,0.672325146451775,0,0,0.975865597581014,0.123121058076788,0.816002764977012,0.313454721478088,0,0.136874425072884,0.125542639594803,0.382067028739756,0.410502947249729,0.157421562627358,5.50709987588466,3.0706351847777,4.33485145285013,1.83884244895785,0.90361775633475,0,0.46480320348181,0.568676929949686,3.52320527201817,8.30993112797816,5.81578897663411,10.8505435357926,0.671746422719773,0.647787332037959,0.77272670290256,2.61716829803216,2.64513160582167,1.4555043671269,3.0215774797739,4.11167888021826,4.33588919253145,5.75384784644301,5.12321413058201,7.33094912654614,6.55016793399575,4.51839278508678,13.5426486594342,1.69418105588344,3.82068610080984,6.96642801779762,9.18251677112708,4.8139354061414,6.39337125799041,2.63881040149373,7.18069167437875,3.40979800426155,5.80418477257168,5.6738522469114,6.85104473895132,5.02497330513487,5.73631210262222,4.77815458351257,3.63239701580021,7.36555271975129,5.06339819905415,2.95757400836718,2.33864729961548,4.19317291016752,3.70684482783434,3.00353785683013,0.64290234678832,4.56020389985998,3.38158351238453,1.64397738388171,0,0.546138611262131,0,1.70692089026603,0.800791974072025,0,0.661044872784862,0.954053754535364,1.70763890732835,1.76171156811282,2.6759125968766,3.96513985737078,2.80254281490768,0.790152254325231,1.7703879310245,1.57204305099666,1.85041349099558,0.83593247695339,1.95553359980154,0.473447805734733,1.94826728407911,0.557052284425868,1.47302953737419,2.43687284041983,1.62482318259009,0.640456598628376,0.130059347559878,0.986627427622057,0.276350017785848,0,0.741432815810302,1.07016331235885,3.1360657141493,0.113309342697566,2.68254345521345,1.71813722741315,0.759059076058509,0.318565414324097,0,0.950452044448374,0.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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=109bp_to_ENST00000422640_5end | |||
|coexpression_cluster_id=C686 | |||
|description=CAGE_peak_1_at_ENST00000422640_5end | |||
|id=chr1:200638744..200638765,+ | |||
|ontology_enrichment_celltype=CL:0000738!7.85e-29!140;CL:0000766!2.24e-28!76;CL:0002057!6.65e-28!42;CL:0000557!3.79e-27!71;CL:0000037!1.84e-26!172;CL:0000566!1.84e-26!172;CL:0000839!4.05e-26!70;CL:0000988!6.14e-26!182;CL:0000860!1.04e-25!45;CL:0002009!1.73e-25!65;CL:0002031!1.73e-24!124;CL:0002194!3.05e-24!63;CL:0000576!3.05e-24!63;CL:0000040!3.05e-24!63;CL:0000559!3.05e-24!63;CL:0002032!5.69e-24!165;CL:0000837!5.69e-24!165;CL:0000763!5.88e-24!112;CL:0000049!5.88e-24!112;CL:0002087!9.53e-23!119;CL:0002320!3.27e-17!365;CL:0000134!1.80e-16!358;CL:0000219!1.72e-13!390;CL:0000048!2.84e-13!430;CL:0000034!1.16e-12!444;CL:0000723!2.33e-12!436;CL:0000003!3.35e-07!722;CL:0002393!4.05e-07!9;CL:0002397!4.05e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.28e-43;33!CL:0002057;6.28e-43;33!CL:0000473;4.49e-32;39!CL:0000234;4.49e-32;39!CL:0000576;8.36e-32;48!CL:0000766;3.77e-26;69!CL:0002087;2.30e-13;104!CL:0000763;1.40e-11;100!CL:0000738;5.08e-11;136!CL:0002393;1.76e-10;6!CL:0002397;1.76e-10;6!CL:0000624;8.68e-08;6!CL:0000988;1.57e-07;177!CL:0000094;5.52e-07;8!CL:0000219;9.37e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.24e-60,42;CL:0002057,1.24e-60,42;CL:0000473,2.08e-56,48;CL:0000234,2.08e-56,48;CL:0000766,4.14e-54,72;CL:0000557,7.08e-52,67;CL:0000738,5.40e-51,136;CL:0000839,4.40e-48,66;CL:0002009,5.51e-47,61;CL:0002194,3.38e-44,59;CL:0000576,3.38e-44,59;CL:0000040,3.38e-44,59;CL:0000559,3.38e-44,59;CL:0000037,6.05e-43,168;CL:0002031,1.55e-42,120;CL:0000988,1.72e-39,177;CL:0002087,7.12e-39,115;CL:0000763,1.26e-38,108;CL:0000049,1.26e-38,108;CL:0002032,3.30e-37,161;CL:0000837,3.30e-37,161;CL:0000134,1.29e-24,354;CL:0002320,1.44e-23,361;CL:0000219,1.30e-20,386;CL:0000048,2.29e-17,427;CL:0000034,2.73e-17,441;CL:0000723,1.01e-16,433;CL:0002393,2.11e-14,9;CL:0002397,2.11e-14,9;CL:0000624,2.20e-08,6;CL:0000094,5.69e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;4.98e-43;42!CL:0000049;1.09e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.29e-24!80;UBERON:0002390!3.14e-22!102;UBERON:0003061!3.14e-22!102;UBERON:0001474!1.29e-21!86;UBERON:0002193!2.71e-17!112;UBERON:0002384!3.00e-17!375;UBERON:0004765!7.66e-16!101;UBERON:0001434!7.66e-16!101;UBERON:0002405!1.17e-14!115;UBERON:0003081!1.53e-11!216;UBERON:0002204!2.31e-08!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.95e-49,76;UBERON:0001474,1.65e-44,82;UBERON:0002390,1.51e-42,98;UBERON:0003061,1.51e-42,98;UBERON:0004765,5.69e-39,90;UBERON:0002405,7.35e-39,93;UBERON:0002193,7.80e-37,108;UBERON:0001434,2.60e-33,100;UBERON:0002384,8.20e-23,371;UBERON:0003081,6.19e-20,203;UBERON:0002204,1.27e-15,167;UBERON:0000926,1.04e-09,315;UBERON:0004120,1.04e-09,315;UBERON:0006603,1.04e-09,315 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0,0,0.446961094427288,1.74467704820074,0,0,0,0,1.39560233594486,0,0.263766978228454,0.247532705920093,0.662794751455832,0.672325146451775,0,0,0.975865597581014,0.123121058076788,0.816002764977012,0.313454721478088,0,0.136874425072884,0.125542639594803,0.382067028739756,0.410502947249729,0.157421562627358,5.50709987588466,3.0706351847777,4.33485145285013,1.83884244895785,0.90361775633475,0,0.46480320348181,0.568676929949686,3.52320527201817,8.30993112797816,5.81578897663411,10.8505435357926,0.671746422719773,0.647787332037959,0.77272670290256,2.61716829803216,2.64513160582167,1.4555043671269,3.0215774797739,4.11167888021826,4.33588919253145,5.75384784644301,5.12321413058201,7.33094912654614,6.55016793399575,4.51839278508678,13.5426486594342,1.69418105588344,3.82068610080984,6.96642801779762,9.18251677112708,4.8139354061414,6.39337125799041,2.63881040149373,7.18069167437875,3.40979800426155,5.80418477257168,5.6738522469114,6.85104473895132,5.02497330513487,5.73631210262222,4.77815458351257,3.63239701580021,7.36555271975129,5.06339819905415,2.95757400836718,2.33864729961548,4.19317291016752,3.70684482783434,3.00353785683013,0.64290234678832,4.56020389985998,3.38158351238453,1.64397738388171,0,0.546138611262131,0,1.70692089026603,0.800791974072025,0,0.661044872784862,0.954053754535364,1.70763890732835,1.76171156811282,2.6759125968766,3.96513985737078,2.80254281490768,0.790152254325231,1.7703879310245,1.57204305099666,1.85041349099558,0.83593247695339,1.95553359980154,0.473447805734733,1.94826728407911,0.557052284425868,1.47302953737419,2.43687284041983,1.62482318259009,0.640456598628376,0.130059347559878,0.986627427622057,0.276350017785848,0,0.741432815810302,1.07016331235885,3.1360657141493,0.113309342697566,2.68254345521345,1.71813722741315,0.759059076058509,0.318565414324097,0,0.950452044448374,0.301150238155546,0.255973222308837,0,0,0,1.00803371612366,1.60464117470104,1.01377082717959,0,0,0.12786256184353,0.361439152384566,0,0.144846518960824,0,3.40644409211845,0.189069634328136,0,0.087834785693126,0.196468613246569,0,0,0.324547393654683,0.696518949197069,0.26591592103773,2.38490624305342,5.71994910780128,2.60020250930695,0,0,0.694281003215189,0.56530794192401,0.419499436209906,0,0.417989933073621,0,0,0.33472061276467,0,0,0,0.367663080345869,0,0.17859945656816,0.22452937262617,0.450445921933289,1.53316637465883,0,0,1.31780417436063,3.87780264148325,0,0,0.12663051166458,0.529636723252875,2.58152958673932,0.354668382198357,0,1.06748995729705,0.24666754841716,0.311211035399766,0.404132016209064,0.326923806226917,0.151357427644931,0,0.234321431833797,0,0,0.448346041655403,0.587172493218824,0.323745888736263,0.702254033511242,0,0,0.206651562351531,0,0.247266929278557,0,0,0,0.125118519871964,0,0,0,0,0.453728732640084,1.07633781413317,0,0.211931901159562,0.300091096084402,0.103052529238439,1.8034837803194,0,0.675105328965065,0,2.77677151668526,0.184099797284599,0,1.77504796258307,0,0.169560592310488,0.193260853163297,0.272746120590835,0,0.243947412259191,0,0,0,0.252320850875628,0,0,1.28648187638577,1.38134921352481,0.464367928031979,0.721879481669586,0.236613600079688,0,0,0,0,0,0.269662616320329,0.196221465125346,0,1.4763109092493,0,0,0,0,0,0.590789906681404,0,0.245976877086227,0.171567810298526,0,0,0.201057944823262,0.185176890317059,0,1.03993478527958,0,0,0.117408694235822,0,0,0,1.58040879591855,6.86788929675898,0.738651018262192,0.234004265139238,0.743155811443641,0,0,0,0.179117045405697,0,0,0,1.14462964217194,2.90259361757081,2.45003920808834,3.53478813593864,0.063497894292169,0.381988425558278,0,1.71072446022705,0,0,0,0.336393253036082,0.43596006883328,0.22001485746285,0,0,0.845302752556,0.26593811658487,0,0.257207374262142,0,1.3321108950805,0.428933980974443,0,0,0,0,0,0.301439377059586,0.871533458600294,0.499864955910285,0,1.00451418286425,4.21667878966063,0.239624855491583,0,0,0,0.205476322550383,0.358121926479791,0,1.57624608161542,3.45004119775228,3.33691894327346,0,0,0.773288812777695,0.502548796003046,0.637938751653163,0.749007023947182,0,2.90090859405225,0.12269149171914,0.500170521059677,0.271265023699736,0.207970861530807,0.356857977594324,0.315404830067869,0.117141414992713,0,0,1.03473071292505,0,1.29058417979192,0.0868836144680828,0.587403472388222,0.343143423810856,1.6541442089831,3.23571301227925,2.77491650288955,0.303127571446259,1.66435439510497,0.907170879989041,0.248107807818777,2.76231551918512,0.841980283299221,0.128139149255701,0.511707249066704,0.160853921143607,1.48418066444991,0.771048469013278,0,0,0,0.813472649219715,0.241718899183244,0,0,0.114814448164607,0,0.524497659837696,0,0.0770153371044148,0.784349769176855,0,0,0,0.170093705276516,0,1.54227252690289,0,0.501689773854853,0.254876273045038,0,0.447749509444357,0.657779629937804,1.3071772551245,0,0.656029291399411,0.325378394664303,0.515205058238611,0,0,0,0,0,0.193341436584244,0.154048617114644,0.460511024178389,1.37836572484531,0.214840489736547,0.290033387828457,0.2556798822483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| |||
|short_description=p1@ENST00000422640 | |||
}} |
Revision as of 02:41, 12 September 2013
Short description: | p1@ENST00000422640 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENST00000422640_5end |
Coexpression cluster: | C686_CD14_immature_CD19_Eosinophils_migratory_Mast_Basophils |
Association with transcript: | 109bp_to_ENST00000422640_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.95e-49 | 76 |
bone element | 1.65e-44 | 82 |
hematopoietic system | 1.51e-42 | 98 |
blood island | 1.51e-42 | 98 |
skeletal element | 5.69e-39 | 90 |
immune system | 7.35e-39 | 93 |
hemolymphoid system | 7.80e-37 | 108 |
skeletal system | 2.60e-33 | 100 |
connective tissue | 8.20e-23 | 371 |
lateral plate mesoderm | 6.19e-20 | 203 |
musculoskeletal system | 1.27e-15 | 167 |
mesoderm | 1.04e-09 | 315 |
mesoderm-derived structure | 1.04e-09 | 315 |
presumptive mesoderm | 1.04e-09 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.