FFCP PHASE1:Hg19::chr1:38465437..38465459,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C82|description=CAGE_peak_at_chr1:38465437..38465459,+|id=chr1:38465437..38465459,+|ontology_enrichment_celltype=CL:0002057!5.21e-66!42;CL:0000860!4.04e-64!45;CL:0000766!3.72e-54!76;CL:0000557!4.60e-47!71;CL:0002009!1.27e-44!65;CL:0000839!4.04e-43!70;CL:0000763!1.08e-42!112;CL:0000049!1.08e-42!112;CL:0002194!1.79e-41!63;CL:0000576!1.79e-41!63;CL:0000040!1.79e-41!63;CL:0000559!1.79e-41!63;CL:0000738!9.83e-33!140;CL:0000037!6.55e-30!172;CL:0000566!6.55e-30!172;CL:0000988!2.30e-27!182;CL:0002032!1.59e-26!165;CL:0000837!1.59e-26!165;CL:0002031!3.68e-24!124;CL:0002087!6.77e-23!119;CL:0000134!2.15e-12!358;CL:0002320!7.99e-12!365;CL:0000034!5.51e-11!444;CL:0000094!8.06e-11!8;CL:0000048!1.24e-10!430;CL:0000723!3.11e-10!436;CL:0000219!7.81e-10!390;CL:0000767!2.14e-08!3;CL:0000081!1.35e-07!11;CL:0000842!4.34e-07!3|ontology_enrichment_celltype_v019=CL:0000860;9.12e-90;33!CL:0002057;9.12e-90;33!CL:0000473;4.47e-61;39!CL:0000234;4.47e-61;39!CL:0000576;1.84e-51;48!CL:0000766;1.43e-40;69!CL:0000094;2.05e-23;8!CL:0000767;5.49e-17;3!CL:0000081;7.23e-17;11!CL:0000763;4.54e-16;100!CL:0002087;5.82e-12;104!CL:0000738;3.63e-11;136!CL:0002393;2.25e-08;6!CL:0002397;2.25e-08;6!CL:0000775;9.22e-08;3|ontology_enrichment_celltype_v019_2=CL:0000860,2.07e-94,42;CL:0002057,2.07e-94,42;CL:0000766,2.66e-83,72;CL:0000473,7.60e-82,48;CL:0000234,7.60e-82,48;CL:0002194,3.02e-64,59;CL:0000576,3.02e-64,59;CL:0000040,3.02e-64,59;CL:0000559,3.02e-64,59;CL:0002009,5.63e-62,61;CL:0000839,2.81e-61,66;CL:0000557,2.77e-60,67;CL:0000763,1.59e-53,108;CL:0000049,1.59e-53,108;CL:0000738,9.69e-44,136;CL:0000037,3.98e-34,168;CL:0002032,9.78e-34,161;CL:0000837,9.78e-34,161;CL:0002087,1.38e-32,115;CL:0000988,4.82e-32,177;CL:0002031,4.29e-31,120;CL:0000094,2.03e-23,8;CL:0000767,5.52e-17,3;CL:0000081,7.16e-17,11;CL:0000134,1.83e-13,354;CL:0002320,4.64e-13,361;CL:0000219,1.22e-11,386;CL:0000034,3.96e-11,441;CL:0000048,6.77e-10,427;CL:0000723,1.18e-09,433;CL:0000775,9.55e-08,3|ontology_enrichment_development_v019=CL:0002057;7.81e-70;42!CL:0000049;1.02e-15;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!1.58e-42!80;UBERON:0002390!1.73e-39!102;UBERON:0003061!1.73e-39!102;UBERON:0001474!1.16e-38!86;UBERON:0002193!2.22e-36!112;UBERON:0002405!1.92e-31!115;UBERON:0004765!5.22e-31!101;UBERON:0001434!5.22e-31!101;UBERON:0003081!8.03e-20!216;UBERON:0002204!1.80e-18!167;UBERON:0002384!1.22e-11!375|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.69e-52,76;UBERON:0001474,3.03e-48,82;UBERON:0004765,1.91e-43,90;UBERON:0002390,2.57e-42,98;UBERON:0003061,2.57e-42,98;UBERON:0002405,7.41e-42,93;UBERON:0001434,1.63e-38,100;UBERON:0002193,7.73e-38,108;UBERON:0002204,1.33e-20,167;UBERON:0003081,1.47e-18,203;UBERON:0002384,1.65e-12,371;UBERON:0000926,1.32e-09,315;UBERON:0004120,1.32e-09,315;UBERON:0006603,1.32e-09,315|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.68719270643137,3.45446458287491,5.72819656269481,0,0,0,0,0,0.587200878669695,4.43196326825502,3.20871115952227,1.08505435357926,0,0,0,1.01778767145695,2.26725566213286,1.69808842831471,1.39457422143411,1.6446715520873,4.02618282163635,0.863077176966451,2.0492856522328,1.6553756092201,1.72372840368309,2.5819387343353,5.41705946377367,2.25890807451126,1.63743690034707,1.57306439111559,1.83650335422542,1.60464513538047,0.639337125799041,0.989553900560148,1.39624560335142,1.70489900213078,1.16083695451434,0.56738522469114,1.86846674698672,1.00499466102697,2.08593167368081,1.95469960234605,2.42159801053347,2.20966581592539,1.89877432464531,0,0.212604299965044,0.209658645508376,0.112328631146495,0.300353785683013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,4.48406850385229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0.56530794192401,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,3.87780264148325,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.28060927094849,0.288239906833923,0.75745460055828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.513372145118994,0,0,0,0,0,1.49801404789436,0,3.72973962092432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,1.2942852049117,0.853820462427555,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C82 | |||
|description=CAGE_peak_at_chr1:38465437..38465459,+ | |||
|id=chr1:38465437..38465459,+ | |||
|ontology_enrichment_celltype=CL:0002057!5.21e-66!42;CL:0000860!4.04e-64!45;CL:0000766!3.72e-54!76;CL:0000557!4.60e-47!71;CL:0002009!1.27e-44!65;CL:0000839!4.04e-43!70;CL:0000763!1.08e-42!112;CL:0000049!1.08e-42!112;CL:0002194!1.79e-41!63;CL:0000576!1.79e-41!63;CL:0000040!1.79e-41!63;CL:0000559!1.79e-41!63;CL:0000738!9.83e-33!140;CL:0000037!6.55e-30!172;CL:0000566!6.55e-30!172;CL:0000988!2.30e-27!182;CL:0002032!1.59e-26!165;CL:0000837!1.59e-26!165;CL:0002031!3.68e-24!124;CL:0002087!6.77e-23!119;CL:0000134!2.15e-12!358;CL:0002320!7.99e-12!365;CL:0000034!5.51e-11!444;CL:0000094!8.06e-11!8;CL:0000048!1.24e-10!430;CL:0000723!3.11e-10!436;CL:0000219!7.81e-10!390;CL:0000767!2.14e-08!3;CL:0000081!1.35e-07!11;CL:0000842!4.34e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.12e-90;33!CL:0002057;9.12e-90;33!CL:0000473;4.47e-61;39!CL:0000234;4.47e-61;39!CL:0000576;1.84e-51;48!CL:0000766;1.43e-40;69!CL:0000094;2.05e-23;8!CL:0000767;5.49e-17;3!CL:0000081;7.23e-17;11!CL:0000763;4.54e-16;100!CL:0002087;5.82e-12;104!CL:0000738;3.63e-11;136!CL:0002393;2.25e-08;6!CL:0002397;2.25e-08;6!CL:0000775;9.22e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.07e-94,42;CL:0002057,2.07e-94,42;CL:0000766,2.66e-83,72;CL:0000473,7.60e-82,48;CL:0000234,7.60e-82,48;CL:0002194,3.02e-64,59;CL:0000576,3.02e-64,59;CL:0000040,3.02e-64,59;CL:0000559,3.02e-64,59;CL:0002009,5.63e-62,61;CL:0000839,2.81e-61,66;CL:0000557,2.77e-60,67;CL:0000763,1.59e-53,108;CL:0000049,1.59e-53,108;CL:0000738,9.69e-44,136;CL:0000037,3.98e-34,168;CL:0002032,9.78e-34,161;CL:0000837,9.78e-34,161;CL:0002087,1.38e-32,115;CL:0000988,4.82e-32,177;CL:0002031,4.29e-31,120;CL:0000094,2.03e-23,8;CL:0000767,5.52e-17,3;CL:0000081,7.16e-17,11;CL:0000134,1.83e-13,354;CL:0002320,4.64e-13,361;CL:0000219,1.22e-11,386;CL:0000034,3.96e-11,441;CL:0000048,6.77e-10,427;CL:0000723,1.18e-09,433;CL:0000775,9.55e-08,3 | |||
|ontology_enrichment_development_v019=CL:0002057;7.81e-70;42!CL:0000049;1.02e-15;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.58e-42!80;UBERON:0002390!1.73e-39!102;UBERON:0003061!1.73e-39!102;UBERON:0001474!1.16e-38!86;UBERON:0002193!2.22e-36!112;UBERON:0002405!1.92e-31!115;UBERON:0004765!5.22e-31!101;UBERON:0001434!5.22e-31!101;UBERON:0003081!8.03e-20!216;UBERON:0002204!1.80e-18!167;UBERON:0002384!1.22e-11!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.69e-52,76;UBERON:0001474,3.03e-48,82;UBERON:0004765,1.91e-43,90;UBERON:0002390,2.57e-42,98;UBERON:0003061,2.57e-42,98;UBERON:0002405,7.41e-42,93;UBERON:0001434,1.63e-38,100;UBERON:0002193,7.73e-38,108;UBERON:0002204,1.33e-20,167;UBERON:0003081,1.47e-18,203;UBERON:0002384,1.65e-12,371;UBERON:0000926,1.32e-09,315;UBERON:0004120,1.32e-09,315;UBERON:0006603,1.32e-09,315 | |||
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|short_description=p@chr1:38465437..38465459,+ | |||
}} |
Revision as of 05:36, 12 September 2013
Short description: | p@chr1:38465437..38465459, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:38465437..38465459, + |
Coexpression cluster: | C82_Basophils_CD14_Eosinophils_Natural_Peripheral_immature_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.07e-94 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.07e-94 | 42 |
myeloid leukocyte | 2.66e-83 | 72 |
defensive cell | 7.60e-82 | 48 |
phagocyte | 7.60e-82 | 48 |
monopoietic cell | 3.02e-64 | 59 |
monocyte | 3.02e-64 | 59 |
monoblast | 3.02e-64 | 59 |
promonocyte | 3.02e-64 | 59 |
macrophage dendritic cell progenitor | 5.63e-62 | 61 |
myeloid lineage restricted progenitor cell | 2.81e-61 | 66 |
granulocyte monocyte progenitor cell | 2.77e-60 | 67 |
myeloid cell | 1.59e-53 | 108 |
common myeloid progenitor | 1.59e-53 | 108 |
leukocyte | 9.69e-44 | 136 |
hematopoietic stem cell | 3.98e-34 | 168 |
hematopoietic oligopotent progenitor cell | 9.78e-34 | 161 |
hematopoietic multipotent progenitor cell | 9.78e-34 | 161 |
nongranular leukocyte | 1.38e-32 | 115 |
hematopoietic cell | 4.82e-32 | 177 |
hematopoietic lineage restricted progenitor cell | 4.29e-31 | 120 |
granulocyte | 2.03e-23 | 8 |
basophil | 5.52e-17 | 3 |
blood cell | 7.16e-17 | 11 |
mesenchymal cell | 1.83e-13 | 354 |
connective tissue cell | 4.64e-13 | 361 |
motile cell | 1.22e-11 | 386 |
stem cell | 3.96e-11 | 441 |
multi fate stem cell | 6.77e-10 | 427 |
somatic stem cell | 1.18e-09 | 433 |
neutrophil | 9.55e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.69e-52 | 76 |
bone element | 3.03e-48 | 82 |
skeletal element | 1.91e-43 | 90 |
hematopoietic system | 2.57e-42 | 98 |
blood island | 2.57e-42 | 98 |
immune system | 7.41e-42 | 93 |
skeletal system | 1.63e-38 | 100 |
hemolymphoid system | 7.73e-38 | 108 |
musculoskeletal system | 1.33e-20 | 167 |
lateral plate mesoderm | 1.47e-18 | 203 |
connective tissue | 1.65e-12 | 371 |
mesoderm | 1.32e-09 | 315 |
mesoderm-derived structure | 1.32e-09 | 315 |
presumptive mesoderm | 1.32e-09 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.