FFCP PHASE1:Hg19::chr20:62273138..62273178,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=50861|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=15926|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_AK131326_5end|coexpression_cluster_id=C272|description=CAGE_peak_5_at_STMN3_5end|id=chr20:62273138..62273178,-|ontology_enrichment_celltype=CL:0000738!1.07e-30!140;CL:0002087!8.87e-29!119;CL:0002031!5.39e-27!124;CL:0000542!9.02e-26!53;CL:0000051!9.02e-26!53;CL:0000838!2.24e-25!52;CL:0000037!4.56e-22!172;CL:0000566!4.56e-22!172;CL:0000988!2.44e-21!182;CL:0002032!5.36e-19!165;CL:0000837!5.36e-19!165;CL:0000791!1.49e-18!18;CL:0000789!1.49e-18!18;CL:0002420!1.49e-18!18;CL:0002419!1.49e-18!18;CL:0000790!1.49e-18!18;CL:0000084!4.70e-14!25;CL:0000827!4.70e-14!25;CL:0000625!4.84e-12!11;CL:0000236!6.74e-12!14;CL:0000945!2.88e-10!24;CL:0000826!2.88e-10!24;CL:0002393!7.23e-08!9;CL:0002397!7.23e-08!9;CL:0000624!1.57e-07!6;CL:0000766!7.72e-07!76;CL:0000557!7.76e-07!71|ontology_enrichment_celltype_v019=CL:0000791;5.35e-43;18!CL:0000789;5.35e-43;18!CL:0002419;5.35e-43;18!CL:0000625;8.34e-30;11!CL:0000084;1.23e-29;25!CL:0000542;6.35e-27;53!CL:0000236;1.05e-25;13!CL:0000624;1.42e-17;6!CL:0000945;1.00e-12;24!CL:0000898;3.28e-10;3!CL:0000226;2.64e-09;3!CL:0000842;2.64e-09;3!CL:0002087;1.21e-08;104!CL:0000623;2.45e-08;3!CL:0000815;2.11e-07;2!CL:0000792;2.11e-07;2!CL:0002677;2.11e-07;2|ontology_enrichment_celltype_v019_2=CL:0000838,8.71e-46,52;CL:0000542,9.38e-45,53;CL:0000051,9.38e-45,53;CL:0000791,3.53e-43,18;CL:0000789,3.53e-43,18;CL:0002420,3.53e-43,18;CL:0002419,3.53e-43,18;CL:0000790,3.53e-43,18;CL:0000625,6.90e-30,11;CL:0000084,9.19e-30,25;CL:0000827,9.19e-30,25;CL:0002087,3.01e-27,115;CL:0000236,1.04e-23,14;CL:0000738,8.27e-23,136;CL:0002031,5.08e-21,120;CL:0000624,1.10e-17,6;CL:0000037,1.61e-16,168;CL:0000988,3.60e-15,177;CL:0002032,2.45e-13,161;CL:0000837,2.45e-13,161;CL:0000945,9.61e-13,24;CL:0000826,9.61e-13,24;CL:0000898,3.19e-10,3;CL:0000226,2.40e-09,3;CL:0000842,2.40e-09,3;CL:0000623,2.24e-08,3;CL:0000825,2.24e-08,3;CL:0000815,2.05e-07,2;CL:0000792,2.05e-07,2;CL:0002677,2.05e-07,2|ontology_enrichment_development_v019=CL:0000790;5.35e-43;18!CL:0000051;6.35e-27;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!9.81e-15!112;UBERON:0002390!1.18e-14!102;UBERON:0003061!1.18e-14!102;UBERON:0000178!3.00e-10!15;UBERON:0000179!3.00e-10!15;UBERON:0000463!3.00e-10!15;UBERON:0002405!6.99e-07!115|ontology_enrichment_uberon_v019=UBERON:0000178;4.87e-20;15!UBERON:0000179;4.87e-20;15!UBERON:0000463;4.87e-20;15!UBERON:0002390;2.51e-09;32!UBERON:0002193;1.51e-07;42|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.06e-20,15;UBERON:0000179,4.06e-20,15;UBERON:0000463,4.06e-20,15|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.164201178899891,0.314843125254717,0,0.383829398097213,0.464448369948228,0,0,0.369754010166788,0,0.142169232487422,0.293600439334847,1.10799081706375,0.401088894940283,0.651032612147555,0.447830948479849,0.971680998056939,0.257575567634187,0,0.755751887377619,0.242584061187816,0,0,0,0.28769239232215,0.256160706529101,0,0,0,0,0.188242339542605,0.545812300115692,0,0,0,0,0.659702600373432,0.398927315243264,0,0,0,0,0.251248665256743,0,0.434377689410233,0.605399502633369,0,0,0.845021145247767,0.425208599930087,1.04829322754188,1.68492946719743,0.300353785683013,0.803627933485401,1.14005097496499,0.59675003159727,0.547992461293902,5.27988733383968,13.6534652815533,9.7846017924991,2.98711155796555,11.2110876370083,7.47178171940828,3.30522436392431,7.63243003628291,3.98449078376614,2.93618594685469,3.05818582500183,0,0,0.526768169550154,2.9506465517075,3.93010762749165,2.67281948699362,6.68745981562712,14.9924242651452,16.0972253949809,17.534405556712,3.7879555340959,8.83817722424511,5.31681347000691,7.04090045789041,2.43373507478783,6.89314542067355,1.31550323682941,1.38175008892924,1.44901542867526,12.0112116161269,11.7717964359474,11.4989076185474,3.62589896632212,8.81407135284419,8.59068613706575,6.83153168452658,8.91983160107471,9.11516835398986,7.60361635558699,3.76437797694432,8.31912972503719,2.49861453104692,5.20909954496837,1.64225599384209,2.01606743224732,1.87208137048455,3.47578569318718,0,0,0,0,0,0,0,0,0.283604451492204,0,0,0,0,0,0.649094787309367,0.348259474598534,0.398873881556595,0.953962497221368,1.14398982156026,0.74291500265913,0,0,0,0,0,0.275118041940067,0.208994966536811,0,0,0,0,0,0.976248230192678,0.367663080345869,0.81014194788176,0,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,1.06748995729705,0,0,0.269421344139376,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0.10075209822764,0,0.193260853163297,0,0,0.121973706129595,0.132529768321485,0.232387885739037,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,1.40241773803446,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0.325808305310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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=50861 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=15926 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_AK131326_5end | |||
|coexpression_cluster_id=C272 | |||
|description=CAGE_peak_5_at_STMN3_5end | |||
|id=chr20:62273138..62273178,- | |||
|ontology_enrichment_celltype=CL:0000738!1.07e-30!140;CL:0002087!8.87e-29!119;CL:0002031!5.39e-27!124;CL:0000542!9.02e-26!53;CL:0000051!9.02e-26!53;CL:0000838!2.24e-25!52;CL:0000037!4.56e-22!172;CL:0000566!4.56e-22!172;CL:0000988!2.44e-21!182;CL:0002032!5.36e-19!165;CL:0000837!5.36e-19!165;CL:0000791!1.49e-18!18;CL:0000789!1.49e-18!18;CL:0002420!1.49e-18!18;CL:0002419!1.49e-18!18;CL:0000790!1.49e-18!18;CL:0000084!4.70e-14!25;CL:0000827!4.70e-14!25;CL:0000625!4.84e-12!11;CL:0000236!6.74e-12!14;CL:0000945!2.88e-10!24;CL:0000826!2.88e-10!24;CL:0002393!7.23e-08!9;CL:0002397!7.23e-08!9;CL:0000624!1.57e-07!6;CL:0000766!7.72e-07!76;CL:0000557!7.76e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000791;5.35e-43;18!CL:0000789;5.35e-43;18!CL:0002419;5.35e-43;18!CL:0000625;8.34e-30;11!CL:0000084;1.23e-29;25!CL:0000542;6.35e-27;53!CL:0000236;1.05e-25;13!CL:0000624;1.42e-17;6!CL:0000945;1.00e-12;24!CL:0000898;3.28e-10;3!CL:0000226;2.64e-09;3!CL:0000842;2.64e-09;3!CL:0002087;1.21e-08;104!CL:0000623;2.45e-08;3!CL:0000815;2.11e-07;2!CL:0000792;2.11e-07;2!CL:0002677;2.11e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,8.71e-46,52;CL:0000542,9.38e-45,53;CL:0000051,9.38e-45,53;CL:0000791,3.53e-43,18;CL:0000789,3.53e-43,18;CL:0002420,3.53e-43,18;CL:0002419,3.53e-43,18;CL:0000790,3.53e-43,18;CL:0000625,6.90e-30,11;CL:0000084,9.19e-30,25;CL:0000827,9.19e-30,25;CL:0002087,3.01e-27,115;CL:0000236,1.04e-23,14;CL:0000738,8.27e-23,136;CL:0002031,5.08e-21,120;CL:0000624,1.10e-17,6;CL:0000037,1.61e-16,168;CL:0000988,3.60e-15,177;CL:0002032,2.45e-13,161;CL:0000837,2.45e-13,161;CL:0000945,9.61e-13,24;CL:0000826,9.61e-13,24;CL:0000898,3.19e-10,3;CL:0000226,2.40e-09,3;CL:0000842,2.40e-09,3;CL:0000623,2.24e-08,3;CL:0000825,2.24e-08,3;CL:0000815,2.05e-07,2;CL:0000792,2.05e-07,2;CL:0002677,2.05e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000790;5.35e-43;18!CL:0000051;6.35e-27;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!9.81e-15!112;UBERON:0002390!1.18e-14!102;UBERON:0003061!1.18e-14!102;UBERON:0000178!3.00e-10!15;UBERON:0000179!3.00e-10!15;UBERON:0000463!3.00e-10!15;UBERON:0002405!6.99e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.87e-20;15!UBERON:0000179;4.87e-20;15!UBERON:0000463;4.87e-20;15!UBERON:0002390;2.51e-09;32!UBERON:0002193;1.51e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.06e-20,15;UBERON:0000179,4.06e-20,15;UBERON:0000463,4.06e-20,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.164201178899891,0.314843125254717,0,0.383829398097213,0.464448369948228,0,0,0.369754010166788,0,0.142169232487422,0.293600439334847,1.10799081706375,0.401088894940283,0.651032612147555,0.447830948479849,0.971680998056939,0.257575567634187,0,0.755751887377619,0.242584061187816,0,0,0,0.28769239232215,0.256160706529101,0,0,0,0,0.188242339542605,0.545812300115692,0,0,0,0,0.659702600373432,0.398927315243264,0,0,0,0,0.251248665256743,0,0.434377689410233,0.605399502633369,0,0,0.845021145247767,0.425208599930087,1.04829322754188,1.68492946719743,0.300353785683013,0.803627933485401,1.14005097496499,0.59675003159727,0.547992461293902,5.27988733383968,13.6534652815533,9.7846017924991,2.98711155796555,11.2110876370083,7.47178171940828,3.30522436392431,7.63243003628291,3.98449078376614,2.93618594685469,3.05818582500183,0,0,0.526768169550154,2.9506465517075,3.93010762749165,2.67281948699362,6.68745981562712,14.9924242651452,16.0972253949809,17.534405556712,3.7879555340959,8.83817722424511,5.31681347000691,7.04090045789041,2.43373507478783,6.89314542067355,1.31550323682941,1.38175008892924,1.44901542867526,12.0112116161269,11.7717964359474,11.4989076185474,3.62589896632212,8.81407135284419,8.59068613706575,6.83153168452658,8.91983160107471,9.11516835398986,7.60361635558699,3.76437797694432,8.31912972503719,2.49861453104692,5.20909954496837,1.64225599384209,2.01606743224732,1.87208137048455,3.47578569318718,0,0,0,0,0,0,0,0,0.283604451492204,0,0,0,0,0,0.649094787309367,0.348259474598534,0.398873881556595,0.953962497221368,1.14398982156026,0.74291500265913,0,0,0,0,0,0.275118041940067,0.208994966536811,0,0,0,0,0,0.976248230192678,0.367663080345869,0.81014194788176,0,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,1.06748995729705,0,0,0.269421344139376,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0.10075209822764,0,0.193260853163297,0,0,0.121973706129595,0.132529768321485,0.232387885739037,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,1.40241773803446,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0.288732895522148,0,0.380508304469197,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0.528290604079356,0.414656231081544,0.288239906833923,0.25248486685276,0,0,1.17217447210047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00451418286425,0,0,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0.448340575974109,1.37921532141349,1.2937654491571,1.41177339907723,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,3.92859249633486,5.82428342210265,2.56146138728266,0,0,0,0,0.306923946576125,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0.451199612907412,0,0.784349769176855,0,0,0,0,0,0,0.270946437543853,0.501689773854853,0,0,0.223874754722178,0,0,0,0,0,0,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0,0.214840489736547,0.290033387828457,0,0,0,0,0.255225424989168,0,0,0,0.6970372701606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0.329294892959902,0,0,0,0.670302275535787,0,0.0941438007767792,0.43050537267123,1.68471475667626,0,0,2.53723804616085,1.52927441428475,0.569647187174163,2.62054953003568,1.23408681925858,1.94541993357815,1.08006287447623,5.55187623405989,0,0,0,0.185803175125719,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0.293016358543788,0,0.780103689942349,0,0,0,0,0.994147647766298,0.140669416410513,0.222617410045812,0,0,0,0.276283915531148,0,0,0,0,0.0898683511473268,0,0,0.0986434056369336,4.7896618469388,0,0.969332746095218,0.0927680981618513,0,0,0,0.724999575434793,0.1137934482855,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421996129056054,0,0,0,0,0.176915129006678,0,0.296521128680622,0,0,0,0,0.234264445725339,0.364909578431332,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0.126621591911757,0,0.0801588202515337,0,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0.136905378891993,0,0,0.262887354279314,0.279282401272254,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0.77380195455795,0,0,0.236417121897595,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0.39669780522807,0,0,0,0,0.828478110694391,1.9846640872478,0.395223263795889,0.121792598380896,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0.300515217994437,0,0,0,0.107410557042488,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.817826971279221,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0.0981477185010256,0.11796972334774,0,0,0,0,0,0.150420656698515,0,0,0.261906694481422,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975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| |||
|short_description=p5@STMN3 | |||
}} |
Revision as of 09:37, 12 September 2013
Short description: | p5@STMN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_STMN3_5end |
Coexpression cluster: | C272_CD19_CD4_CD8_Whole_Peripheral_lymph_tonsil |
Association with transcript: | 0bp_to_AK131326_5end |
EntrezGene: | STMN3 |
HGNC: | 15926 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 8.71e-46 | 52 |
lymphocyte | 9.38e-45 | 53 |
common lymphoid progenitor | 9.38e-45 | 53 |
mature alpha-beta T cell | 3.53e-43 | 18 |
alpha-beta T cell | 3.53e-43 | 18 |
immature T cell | 3.53e-43 | 18 |
mature T cell | 3.53e-43 | 18 |
immature alpha-beta T cell | 3.53e-43 | 18 |
CD8-positive, alpha-beta T cell | 6.90e-30 | 11 |
T cell | 9.19e-30 | 25 |
pro-T cell | 9.19e-30 | 25 |
nongranular leukocyte | 3.01e-27 | 115 |
B cell | 1.04e-23 | 14 |
leukocyte | 8.27e-23 | 136 |
hematopoietic lineage restricted progenitor cell | 5.08e-21 | 120 |
CD4-positive, alpha-beta T cell | 1.10e-17 | 6 |
hematopoietic stem cell | 1.61e-16 | 168 |
hematopoietic cell | 3.60e-15 | 177 |
hematopoietic oligopotent progenitor cell | 2.45e-13 | 161 |
hematopoietic multipotent progenitor cell | 2.45e-13 | 161 |
lymphocyte of B lineage | 9.61e-13 | 24 |
pro-B cell | 9.61e-13 | 24 |
naive T cell | 3.19e-10 | 3 |
single nucleate cell | 2.40e-09 | 3 |
mononuclear cell | 2.40e-09 | 3 |
natural killer cell | 2.24e-08 | 3 |
pro-NK cell | 2.24e-08 | 3 |
regulatory T cell | 2.05e-07 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 2.05e-07 | 2 |
naive regulatory T cell | 2.05e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 4.06e-20 | 15 |
haemolymphatic fluid | 4.06e-20 | 15 |
organism substance | 4.06e-20 | 15 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.