FFCP PHASE1:Hg19::chr2:157186310..157186350,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4929|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=7981|TSSclassifier=N|UniProt=F1D8N6,F1DAL2|association_with_transcript=347bp_to_HQ692824,HQ709176_5end|coexpression_cluster_id=C1881|description=CAGE_peak_10_at_NR4A2_5end|id=chr2:157186310..157186350,-|ontology_enrichment_celltype=CL:0000738!1.96e-17!140;CL:0002057!8.91e-17!42;CL:0000766!1.45e-16!76;CL:0000860!4.38e-16!45;CL:0000557!1.30e-13!71;CL:0002031!1.30e-12!124;CL:0000839!4.57e-12!70;CL:0000037!8.20e-12!172;CL:0000566!8.20e-12!172;CL:0000988!2.86e-11!182;CL:0002087!9.34e-11!119;CL:0002009!1.96e-10!65;CL:0002032!2.48e-10!165;CL:0000837!2.48e-10!165;CL:0000763!1.22e-09!112;CL:0000049!1.22e-09!112;CL:0002194!2.53e-09!63;CL:0000576!2.53e-09!63;CL:0000040!2.53e-09!63;CL:0000559!2.53e-09!63;CL:0002274!3.23e-07!5;CL:0000457!3.23e-07!5;CL:0002191!3.23e-07!5;CL:0000097!3.23e-07!5;CL:0000831!3.23e-07!5;CL:0002028!3.23e-07!5|ontology_enrichment_celltype_v019=CL:0000860;6.83e-19;33!CL:0002057;6.83e-19;33!CL:0000766;1.09e-17;69!CL:0000097;1.31e-16;5!CL:0000473;6.79e-15;39!CL:0000234;6.79e-15;39!CL:0000623;1.01e-14;3!CL:0000576;1.79e-10;48!CL:0002087;9.38e-10;104!CL:0000094;1.49e-09;8!CL:0000163;3.02e-09;9!CL:0000738;9.74e-09;136!CL:0000763;1.16e-07;100!CL:0000226;1.98e-07;3!CL:0000775;1.98e-07;3!CL:0000842;1.98e-07;3!CL:0000081;5.78e-07;11|ontology_enrichment_celltype_v019_2=CL:0000738,2.51e-35,136;CL:0000766,7.55e-29,72;CL:0000037,3.11e-27,168;CL:0002031,1.27e-26,120;CL:0000988,1.76e-25,177;CL:0002032,6.74e-25,161;CL:0000837,6.74e-25,161;CL:0002087,1.57e-23,115;CL:0000860,1.73e-21,42;CL:0002057,1.73e-21,42;CL:0000839,4.70e-21,66;CL:0000557,1.11e-20,67;CL:0000473,2.19e-18,48;CL:0000234,2.19e-18,48;CL:0000763,1.48e-17,108;CL:0000049,1.48e-17,108;CL:0000097,1.27e-16,5;CL:0002028,1.27e-16,5;CL:0000623,8.40e-15,3;CL:0000825,8.40e-15,3;CL:0002194,4.74e-14,59;CL:0000576,4.74e-14,59;CL:0000040,4.74e-14,59;CL:0000559,4.74e-14,59;CL:0002009,1.71e-13,61;CL:0000134,7.35e-10,354;CL:0000094,1.39e-09,8;CL:0002320,1.60e-09,361;CL:0000163,2.96e-09,9;CL:0000219,2.48e-08,386;CL:0000226,1.92e-07,3;CL:0000842,1.92e-07,3;CL:0000775,2.04e-07,3;CL:0000838,2.05e-07,52;CL:0000542,3.06e-07,53;CL:0000051,3.06e-07,53;CL:0000034,4.53e-07,441;CL:0000081,5.51e-07,11;CL:0000048,7.03e-07,427|ontology_enrichment_development_v019=CL:0002057;2.45e-16;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!1.10e-11!80;UBERON:0002390!1.83e-11!102;UBERON:0003061!1.83e-11!102;UBERON:0001474!5.91e-11!86;UBERON:0004765!6.02e-11!101;UBERON:0001434!6.02e-11!101;UBERON:0002193!7.85e-10!112;UBERON:0002405!9.62e-08!115;UBERON:0007023!8.05e-07!115|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0001474,4.79e-18,82;UBERON:0002371,9.49e-18,76;UBERON:0002390,3.24e-16,98;UBERON:0003061,3.24e-16,98;UBERON:0004765,4.69e-16,90;UBERON:0002193,2.75e-14,108;UBERON:0001434,5.15e-14,100;UBERON:0002405,9.39e-14,93;UBERON:0002384,4.63e-09,371|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0.662794751455832,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18009283054671,0.767658796194425,0.77408061658038,0,0,0,0,0,0,0,2.00544447470142,1.95309783644267,0,0,0,0,0,0.242584061187816,1.16214518452842,0.411167888021826,1.54853185447552,0.575384784644301,1.0246428261164,0.709446689665756,1.03423704220986,2.5819387343353,8.12558919566051,1.50593871634084,0.272906150057846,1.12361742222542,2.75475503133812,2.88836124368484,6.39337125799041,0,0,0.426224750532694,0.580418477257168,0,0,1.7587406567972,1.0429658368404,0.868755378820466,0.605399502633369,0.368277635987565,0,0,0,0,0.336985893439485,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,2.93618594685469,3.44045905312706,0,1.12101712596307,0,0.393419540227666,4.32311839024081,4.11202997999018,0,0.651844533267181,0,0,0,0.589211814949674,0,0.270803863765016,0.128091319725675,0,0,0,0,0.444859689486181,0,1.04535523804977,0,0,0.34362744548263,1.01207876807801,0,0,0,0,0,0,0,0,2.21767417547206,5.34880391567015,2.02754165435919,0,0,0,0,0,0,0,0.486634870302636,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0.247266929278557,0,0,0,0,0,0,0,0.45071417671979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.8239177095026,0.088048434013226,12.4396869324463,4.32359860250884,10.8568492746687,0.063497894292169,0.381988425558278,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56139988262505,2.80315847317372,1.28343036279748,0.254094624222463,0,0,0,0,3.74503511973591,0,2.48649308061621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,3.01999881146064,2.77491650288955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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4929 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=7981 | |||
|TSSclassifier=N | |||
|UniProt=F1D8N6,F1DAL2 | |||
|association_with_transcript=347bp_to_HQ692824,HQ709176_5end | |||
|coexpression_cluster_id=C1881 | |||
|description=CAGE_peak_10_at_NR4A2_5end | |||
|id=chr2:157186310..157186350,- | |||
|ontology_enrichment_celltype=CL:0000738!1.96e-17!140;CL:0002057!8.91e-17!42;CL:0000766!1.45e-16!76;CL:0000860!4.38e-16!45;CL:0000557!1.30e-13!71;CL:0002031!1.30e-12!124;CL:0000839!4.57e-12!70;CL:0000037!8.20e-12!172;CL:0000566!8.20e-12!172;CL:0000988!2.86e-11!182;CL:0002087!9.34e-11!119;CL:0002009!1.96e-10!65;CL:0002032!2.48e-10!165;CL:0000837!2.48e-10!165;CL:0000763!1.22e-09!112;CL:0000049!1.22e-09!112;CL:0002194!2.53e-09!63;CL:0000576!2.53e-09!63;CL:0000040!2.53e-09!63;CL:0000559!2.53e-09!63;CL:0002274!3.23e-07!5;CL:0000457!3.23e-07!5;CL:0002191!3.23e-07!5;CL:0000097!3.23e-07!5;CL:0000831!3.23e-07!5;CL:0002028!3.23e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.83e-19;33!CL:0002057;6.83e-19;33!CL:0000766;1.09e-17;69!CL:0000097;1.31e-16;5!CL:0000473;6.79e-15;39!CL:0000234;6.79e-15;39!CL:0000623;1.01e-14;3!CL:0000576;1.79e-10;48!CL:0002087;9.38e-10;104!CL:0000094;1.49e-09;8!CL:0000163;3.02e-09;9!CL:0000738;9.74e-09;136!CL:0000763;1.16e-07;100!CL:0000226;1.98e-07;3!CL:0000775;1.98e-07;3!CL:0000842;1.98e-07;3!CL:0000081;5.78e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.51e-35,136;CL:0000766,7.55e-29,72;CL:0000037,3.11e-27,168;CL:0002031,1.27e-26,120;CL:0000988,1.76e-25,177;CL:0002032,6.74e-25,161;CL:0000837,6.74e-25,161;CL:0002087,1.57e-23,115;CL:0000860,1.73e-21,42;CL:0002057,1.73e-21,42;CL:0000839,4.70e-21,66;CL:0000557,1.11e-20,67;CL:0000473,2.19e-18,48;CL:0000234,2.19e-18,48;CL:0000763,1.48e-17,108;CL:0000049,1.48e-17,108;CL:0000097,1.27e-16,5;CL:0002028,1.27e-16,5;CL:0000623,8.40e-15,3;CL:0000825,8.40e-15,3;CL:0002194,4.74e-14,59;CL:0000576,4.74e-14,59;CL:0000040,4.74e-14,59;CL:0000559,4.74e-14,59;CL:0002009,1.71e-13,61;CL:0000134,7.35e-10,354;CL:0000094,1.39e-09,8;CL:0002320,1.60e-09,361;CL:0000163,2.96e-09,9;CL:0000219,2.48e-08,386;CL:0000226,1.92e-07,3;CL:0000842,1.92e-07,3;CL:0000775,2.04e-07,3;CL:0000838,2.05e-07,52;CL:0000542,3.06e-07,53;CL:0000051,3.06e-07,53;CL:0000034,4.53e-07,441;CL:0000081,5.51e-07,11;CL:0000048,7.03e-07,427 | |||
|ontology_enrichment_development_v019=CL:0002057;2.45e-16;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.10e-11!80;UBERON:0002390!1.83e-11!102;UBERON:0003061!1.83e-11!102;UBERON:0001474!5.91e-11!86;UBERON:0004765!6.02e-11!101;UBERON:0001434!6.02e-11!101;UBERON:0002193!7.85e-10!112;UBERON:0002405!9.62e-08!115;UBERON:0007023!8.05e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,4.79e-18,82;UBERON:0002371,9.49e-18,76;UBERON:0002390,3.24e-16,98;UBERON:0003061,3.24e-16,98;UBERON:0004765,4.69e-16,90;UBERON:0002193,2.75e-14,108;UBERON:0001434,5.15e-14,100;UBERON:0002405,9.39e-14,93;UBERON:0002384,4.63e-09,371 | |||
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|short_description=p10@NR4A2 | |||
}} |
Revision as of 14:10, 12 September 2013
Short description: | p10@NR4A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_NR4A2_5end |
Coexpression cluster: | C1881_Mast_CD14_CD8_Neutrophils_CD4_seminal_CD19 |
Association with transcript: | 347bp_to_HQ692824, HQ709176_5end |
EntrezGene: | NR4A2 |
HGNC: | 7981 |
UniProt: | F1D8N6F1DAL2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone element | 4.79e-18 | 82 |
bone marrow | 9.49e-18 | 76 |
hematopoietic system | 3.24e-16 | 98 |
blood island | 3.24e-16 | 98 |
skeletal element | 4.69e-16 | 90 |
hemolymphoid system | 2.75e-14 | 108 |
skeletal system | 5.15e-14 | 100 |
immune system | 9.39e-14 | 93 |
connective tissue | 4.63e-09 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.