FFCP PHASE1:Hg19::chr2:173470119..173470123,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:173470119..173470123,+|id=chr2:173470119..173470123,+|ontology_enrichment_celltype=CL:0000542!1.21e-09!53;CL:0000051!1.21e-09!53;CL:0000838!2.04e-09!52;CL:0000791!4.81e-07!18;CL:0000789!4.81e-07!18;CL:0002420!4.81e-07!18;CL:0002419!4.81e-07!18;CL:0000790!4.81e-07!18|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0003056;1.32e-13;3!UBERON:0005425;7.81e-11;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:5662;7.81e-11;1|ontology_enrichment_disease_v019_2=DOID:5662,1.61e-10,1|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0000941;7.81e-11;1!UBERON:0001785;7.81e-11;1!UBERON:0002464;7.81e-11;1!UBERON:0004904;7.81e-11;1!UBERON:0001021;7.81e-11;1|ontology_enrichment_uberon_v019_2=UBERON:0000941,6.14e-11,1;UBERON:0001785,6.14e-11,1;UBERON:0002464,6.14e-11,1;UBERON:0004904,6.14e-11,1;UBERON:0001021,6.14e-11,1;UBERON:0003902,6.14e-11,1;UBERON:0005425,6.14e-11,1;UBERON:0000966,3.05e-07,6;UBERON:0005388,3.05e-07,6;UBERON:0001802,3.05e-07,6|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0.136874425072884,0,1.45185470921107,0.821005894499457,1.18066171970519,0,0,0.154816123316076,0,0,0,0.697204805222715,0.568676929949686,0,0,0.601633342410425,0.434021741431704,0.447830948479849,0,0,0,0.377875943688809,0,0,0.411167888021826,0.309706370895104,0.28769239232215,0,0.47296445977717,0,0,0,0.376484679085209,0,0.449446968890169,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.66852776159066,0.853460445133014,1.20118796110804,0.574752439954483,0,0,0.569212969109448,0,0.764546456250458,0,0.560508562981536,0,0.983548850569165,0.786021525498329,0.205601498999509,0,0.651844533267181,0.473447805734733,1.94826728407911,0.111410456885174,0.883817722424512,0.221533894583621,0.270803863765016,0.640456598628376,0.390178042679635,0.328875809207352,0.552700035571697,0,1.33457906845854,0.802622484269139,2.09071047609954,0.226618685395132,0,0.34362744548263,0.253019692019503,0.318565414324097,0.651083453856419,0,0.150575119077773,0.127986611154418,1.24930726552346,0.236777252044017,0,0.403213486449465,0.534880391567015,1.59306844271079,0,0,0.12786256184353,0.361439152384566,0,0.144846518960824,0.795285947051099,0,0,0,0.263504357079378,0.196468613246569,0,0,0,0,0.398873881556595,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0.17859945656816,0,0.112611480483322,0,0,0,0,0,0,0,0.25326102332916,0.529636723252875,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280901613404497,0.204154171254893,0,0.206651562351531,0,0,0,0,0.168336113954066,0.500474079487857,0,0,0,0,0,0,0,0.211931901159562,0,0.309157587715317,0,0,1.68776332241266,0.292311015483596,0.757301322732344,0.368199594569197,0.161646056818812,0.355009592516614,0.10075209822764,0,0,0,0,0,0,0,0,0.756962552626885,0.36497735907583,0,0,0,0,0,0,0,0,0.220587945464788,0.217879444092406,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201057944823262,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0,0,0,0.492434012174795,0.234004265139238,0.148631162288728,0,0,0.141775097242386,0,0,0,0,0,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0.1466765716419,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0.904318131178758,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0.224170287987055,0,0.215627574859517,0.77005821767849,0,0,0,0.167516265334349,0,0,2.99161459204025,0.414415513436035,0,0,0,0.831883446123229,0,0.315404830067869,0.234282829985426,0,0,0,0,0,0,0,0,0.620304078368662,0.862856803274467,1.28073069364133,0,0,0.30239029332968,0.248107807818777,0,0,0,0,0.160853921143607,0,0,0,0,0,0.116210378459959,0.120859449591622,0,0.184161977871793,0,0.182091168006717,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0.103041011647722,0.640986253728404,1.23764249880882,0,0,0,0.096670718292122,0,0,0.275673144969061,0,0,0,0,0,0.192190067365106,1.02090169995667,0.910420027699949,0,0.62962469366128,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0.30982349809975,0.281695602532241,0.143411352204052,0,0,0,0.211107635297664,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0.764637207142375,0.569647187174163,0.476463550915578,1.64544909234478,0,0.540031437238115,0,0,0,0.245040215981032,0.185803175125719,0,0,0,0,0,1.2700414963433,0,0,0,0.47003968731907,0,0,0.1605880751037,0.605399121573143,0,0.343505344755765,0,0,0,0,0.278406173895242,0,0.540911356951966,0,0,0,0,0.121360521749513,0.222886768554957,0,0.23874448473769,0,0.307160702099232,0,0.562677665642051,0.222617410045812,0,0.63337622438398,0.19924798825107,0.276283915531148,0,0,0.369254416383208,0.311039587661807,0,0,0,0.394573622547734,0,0,0.969332746095218,0.0927680981618513,0,0.260427761085233,0.437299999980979,0.724999575434793,0,0.254253650292766,0.472775363535873,0.689486746482929,0.291604613383254,0,0,0.241192877250816,1.52581736317083,0.442317039724898,0.591095237907095,0,0.21787692703798,0,0.0769502585037971,0,0.69169171316418,0.179515288819544,0.325942115766024,0,0,0,0,0,0,0.225595660617181,0.588187602953219,1.34257269580674,0.189753732724185,0.317873157960757,0,0.163232808159148,0,0.432777279484182,0,0.353830258013357,0.611030144933625,0.889563386041866,0,0,0.067401132980677,0,0,0.364909578431332,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0.261177619741208,0.17472666824203,0,0.19351266257817,0.0730893170861856,0.164230914106418,0.0969890164884194,0,0.451961481561065,0.274083849293502,0,0.126621591911757,0,0,0,0,0,0.458146384663663,0.343189995723929,0.288109595976299,0,0,0,0.104602846312333,0,0.288950589901519,0,0.273810757783986,0,0,0.262887354279314,0,0,0.717873024576814,0,0,0,0.201550417460179,0,0,0.0787831823072236,0.329663433524666,0.202210631562555,0.196854963029498,0,0,0.136203406111576,0.160753148465019,0,0,0.2249738915515,0,0.0607495566580247,0,0,0.157363764404994,0.105600336519406,0,0.191915197319445,0,0,0,0,0,0,0,0.328370082997356,0.340776043570843,0,0,0,0,0.39669780522807,0,0.704815022316672,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0.942324577501406,0,0,0.500763722825999,0,0,0.0620964029413835,0.138348634936231,0,0.303298235083296,0,0,0.468334905806882,0.28984205722165,0.149254802886874,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0.621051827505038,0,0.265841714557995,0,0,0,0,0,0,0.464033759878494,0.796191777397232,0,0,0,0,0.192619830407303,0,0,0,0.231522474323834,0,0,0,0,0,0.192914038270915,0,0,0,0,0.276516872303462,0,0,0,0,0.737318726261158,0,0,0,0.172214979660816,0,0,0.139879507719444,0,0.127894371303652,0.107824811396682,0.157265941855896,0.109209638192014,0,0,0.371807292777007,0,0.318004350653419,0.394308725006267,0,0.352675943690684,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0.115525666150338,0,0.690359926060101,0,0.225630985047772,0.60511520611056,0,0,0.163771917510097,0,0.0675375846183947,0,0.620060389503552,0.0634158101939068,0.546974809018219,0,0,0,0.255524855279191,0.535701835878287,0,0,0.227662191351298,0,0.691403925334676,1.02892805662451,0.203909198930495,0.0657727735628491,0,0.111231401892069,0.313972371402056,0.157115589916002,0,0,0,0.47775168788705,0,1.26410889386181,0.464965701472501,0.347716544605159,0,0,0.17071847709395,0,0.430227358820278,0.236664001461131,0.0852134047591577,0,0.22910686854405,0.31020638566432,0,0,0.098150233615243,0,0,0,0,0,0,0.198950775161368,0.118920090777569,0.33883824611688,0.439762066981716,0,0,0,0,0,0,0,0.297046400327086,0,0,0.0939839179798536,0.0644578879735772,0.499705779624645,0,0,0.0802413666891683,0,0.458729283404541,0.716697915757256,0.157771562193185,0,0.436350690340377,0,0,0,0,0.378499274505237,0,0.126698501011437,0,0,0,0.250707539292375,0.151557396436479,0.535928260312357,0,0.413731983447581,0.213233981900981,0,0,0.372448285775147,0,0,0,0,0,0.134704106029175,0,0,0.162806537221949,0.106727345877715,0,0.0898252021065869,0,0.122241444182866,0.406896178315738,0,0.201273793591026,0|short_description=p@chr2:173470119..173470123,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:173470119..173470123,+ | |||
|id=chr2:173470119..173470123,+ | |||
|ontology_enrichment_celltype=CL:0000542!1.21e-09!53;CL:0000051!1.21e-09!53;CL:0000838!2.04e-09!52;CL:0000791!4.81e-07!18;CL:0000789!4.81e-07!18;CL:0002420!4.81e-07!18;CL:0002419!4.81e-07!18;CL:0000790!4.81e-07!18 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.32e-13;3!UBERON:0005425;7.81e-11;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5662;7.81e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:5662,1.61e-10,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;7.81e-11;1!UBERON:0001785;7.81e-11;1!UBERON:0002464;7.81e-11;1!UBERON:0004904;7.81e-11;1!UBERON:0001021;7.81e-11;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,6.14e-11,1;UBERON:0001785,6.14e-11,1;UBERON:0002464,6.14e-11,1;UBERON:0004904,6.14e-11,1;UBERON:0001021,6.14e-11,1;UBERON:0003902,6.14e-11,1;UBERON:0005425,6.14e-11,1;UBERON:0000966,3.05e-07,6;UBERON:0005388,3.05e-07,6;UBERON:0001802,3.05e-07,6 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0.136874425072884,0,1.45185470921107,0.821005894499457,1.18066171970519,0,0,0.154816123316076,0,0,0,0.697204805222715,0.568676929949686,0,0,0.601633342410425,0.434021741431704,0.447830948479849,0,0,0,0.377875943688809,0,0,0.411167888021826,0.309706370895104,0.28769239232215,0,0.47296445977717,0,0,0,0.376484679085209,0,0.449446968890169,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.66852776159066,0.853460445133014,1.20118796110804,0.574752439954483,0,0,0.569212969109448,0,0.764546456250458,0,0.560508562981536,0,0.983548850569165,0.786021525498329,0.205601498999509,0,0.651844533267181,0.473447805734733,1.94826728407911,0.111410456885174,0.883817722424512,0.221533894583621,0.270803863765016,0.640456598628376,0.390178042679635,0.328875809207352,0.552700035571697,0,1.33457906845854,0.802622484269139,2.09071047609954,0.226618685395132,0,0.34362744548263,0.253019692019503,0.318565414324097,0.651083453856419,0,0.150575119077773,0.127986611154418,1.24930726552346,0.236777252044017,0,0.403213486449465,0.534880391567015,1.59306844271079,0,0,0.12786256184353,0.361439152384566,0,0.144846518960824,0.795285947051099,0,0,0,0.263504357079378,0.196468613246569,0,0,0,0,0.398873881556595,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0.17859945656816,0,0.112611480483322,0,0,0,0,0,0,0,0.25326102332916,0.529636723252875,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280901613404497,0.204154171254893,0,0.206651562351531,0,0,0,0,0.168336113954066,0.500474079487857,0,0,0,0,0,0,0,0.211931901159562,0,0.309157587715317,0,0,1.68776332241266,0.292311015483596,0.757301322732344,0.368199594569197,0.161646056818812,0.355009592516614,0.10075209822764,0,0,0,0,0,0,0,0,0.756962552626885,0.36497735907583,0,0,0,0,0,0,0,0,0.220587945464788,0.217879444092406,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201057944823262,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0,0,0,0.492434012174795,0.234004265139238,0.148631162288728,0,0,0.141775097242386,0,0,0,0,0,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0.1466765716419,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0.904318131178758,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0.224170287987055,0,0.215627574859517,0.77005821767849,0,0,0,0.167516265334349,0,0,2.99161459204025,0.414415513436035,0,0,0,0.831883446123229,0,0.315404830067869,0.234282829985426,0,0,0,0,0,0,0,0,0.620304078368662,0.862856803274467,1.28073069364133,0,0,0.30239029332968,0.248107807818777,0,0,0,0,0.160853921143607,0,0,0,0,0,0.116210378459959,0.120859449591622,0,0.184161977871793,0,0.182091168006717,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0.103041011647722,0.640986253728404,1.23764249880882,0,0,0,0.096670718292122,0,0,0.275673144969061,0,0,0,0,0,0.192190067365106,1.02090169995667,0.910420027699949,0,0.62962469366128,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0.30982349809975,0.281695602532241,0.143411352204052,0,0,0,0.211107635297664,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0.764637207142375,0.569647187174163,0.476463550915578,1.64544909234478,0,0.540031437238115,0,0,0,0.245040215981032,0.185803175125719,0,0,0,0,0,1.2700414963433,0,0,0,0.47003968731907,0,0,0.1605880751037,0.605399121573143,0,0.343505344755765,0,0,0,0,0.278406173895242,0,0.540911356951966,0,0,0,0,0.121360521749513,0.222886768554957,0,0.23874448473769,0,0.307160702099232,0,0.562677665642051,0.222617410045812,0,0.63337622438398,0.19924798825107,0.276283915531148,0,0,0.369254416383208,0.311039587661807,0,0,0,0.394573622547734,0,0,0.969332746095218,0.0927680981618513,0,0.260427761085233,0.437299999980979,0.724999575434793,0,0.254253650292766,0.472775363535873,0.689486746482929,0.291604613383254,0,0,0.241192877250816,1.52581736317083,0.442317039724898,0.591095237907095,0,0.21787692703798,0,0.0769502585037971,0,0.69169171316418,0.179515288819544,0.325942115766024,0,0,0,0,0,0,0.225595660617181,0.588187602953219,1.34257269580674,0.189753732724185,0.317873157960757,0,0.163232808159148,0,0.432777279484182,0,0.353830258013357,0.611030144933625,0.889563386041866,0,0,0.067401132980677,0,0,0.364909578431332,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0.261177619741208,0.17472666824203,0,0.19351266257817,0.0730893170861856,0.164230914106418,0.0969890164884194,0,0.451961481561065,0.274083849293502,0,0.126621591911757,0,0,0,0,0,0.458146384663663,0.343189995723929,0.288109595976299,0,0,0,0.104602846312333,0,0.288950589901519,0,0.273810757783986,0,0,0.262887354279314,0,0,0.717873024576814,0,0,0,0.201550417460179,0,0,0.0787831823072236,0.329663433524666,0.202210631562555,0.196854963029498,0,0,0.136203406111576,0.160753148465019,0,0,0.2249738915515,0,0.0607495566580247,0,0,0.157363764404994,0.105600336519406,0,0.191915197319445,0,0,0,0,0,0,0,0.328370082997356,0.340776043570843,0,0,0,0,0.39669780522807,0,0.704815022316672,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0.942324577501406,0,0,0.500763722825999,0,0,0.0620964029413835,0.138348634936231,0,0.303298235083296,0,0,0.468334905806882,0.28984205722165,0.149254802886874,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0.621051827505038,0,0.265841714557995,0,0,0,0,0,0,0.464033759878494,0.796191777397232,0,0,0,0,0.192619830407303,0,0,0,0.231522474323834,0,0,0,0,0,0.192914038270915,0,0,0,0,0.276516872303462,0,0,0,0,0.737318726261158,0,0,0,0.172214979660816,0,0,0.139879507719444,0,0.127894371303652,0.107824811396682,0.157265941855896,0.109209638192014,0,0,0.371807292777007,0,0.318004350653419,0.394308725006267,0,0.352675943690684,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0.115525666150338,0,0.690359926060101,0,0.225630985047772,0.60511520611056,0,0,0.163771917510097,0,0.0675375846183947,0,0.620060389503552,0.0634158101939068,0.546974809018219,0,0,0,0.255524855279191,0.535701835878287,0,0,0.227662191351298,0,0.691403925334676,1.02892805662451,0.203909198930495,0.0657727735628491,0,0.111231401892069,0.313972371402056,0.157115589916002,0,0,0,0.47775168788705,0,1.26410889386181,0.464965701472501,0.347716544605159,0,0,0.17071847709395,0,0.430227358820278,0.236664001461131,0.0852134047591577,0,0.22910686854405,0.31020638566432,0,0,0.098150233615243,0,0,0,0,0,0,0.198950775161368,0.118920090777569,0.33883824611688,0.439762066981716,0,0,0,0,0,0,0,0.297046400327086,0,0,0.0939839179798536,0.0644578879735772,0.499705779624645,0,0,0.0802413666891683,0,0.458729283404541,0.716697915757256,0.157771562193185,0,0.436350690340377,0,0,0,0,0.378499274505237,0,0.126698501011437,0,0,0,0.250707539292375,0.151557396436479,0.535928260312357,0,0.413731983447581,0.213233981900981,0,0,0.372448285775147,0,0,0,0,0,0.134704106029175,0,0,0.162806537221949,0.106727345877715,0,0.0898252021065869,0,0.122241444182866,0.406896178315738,0,0.201273793591026,0 | |||
|short_description=p@chr2:173470119..173470123,+ | |||
}} |
Revision as of 14:42, 12 September 2013
Short description: | p@chr2:173470119..173470123, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:173470119..173470123, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 6.14e-11 | 1 |
cranial nerve | 6.14e-11 | 1 |
nerve trunk | 6.14e-11 | 1 |
nerve connecting eye with brain | 6.14e-11 | 1 |
nerve | 6.14e-11 | 1 |
retinal neural layer | 6.14e-11 | 1 |
presumptive neural retina | 6.14e-11 | 1 |
retina | 3.05e-07 | 6 |
photoreceptor array | 3.05e-07 | 6 |
posterior segment of eyeball | 3.05e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
pleomorphic carcinoma | 1.61e-10 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.