FFCP PHASE1:Mm9::chr10:115712547..115712560,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=19263|HGNC=|MCL_coexpression_id=94|UniProt=E9Q3N7,Q9CX77|association_with_transcript=-18bp_to_ENSMUST00000020363,uc007hbu.1_5end|description=CAGE_peak_5_at_Ptprb_5end|id=chr10:115712547..115712560,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000213,5.73e-07,1;CL:0002078,5.73e-07,1;CL:0000115,5.73e-07,1;CL:0002262,5.73e-07,1;CL:1000398,5.73e-07,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002048!2.23e-10!14;UBERON:0000117!2.23e-10!14;UBERON:0000171!2.23e-10!14;UBERON:0000170!2.23e-10!14;UBERON:0005597!2.23e-10!14;UBERON:0000118!2.23e-10!14;UBERON:0009569!1.22e-09!66;UBERON:0005153!8.95e-09!17;UBERON:0005178!1.99e-07!17;UBERON:0005181!1.99e-07!17;UBERON:0002224!1.99e-07!17;UBERON:0000915!1.99e-07!17;UBERON:0008947!1.99e-07!17;UBERON:0003258!1.99e-07!17;UBERON:0005157!2.29e-07!27;UBERON:0005177!4.69e-07!85|ontology_enrichment_uberon_v019_2=UBERON:0002048,1.35e-29,14;UBERON:0000117,1.35e-29,14;UBERON:0000171,1.35e-29,14;UBERON:0000170,1.35e-29,14;UBERON:0005597,1.35e-29,14;UBERON:0000118,1.35e-29,14;UBERON:0005153,3.42e-24,17;UBERON:0005178,3.42e-24,17;UBERON:0005181,3.42e-24,17;UBERON:0002224,3.42e-24,17;UBERON:0000915,3.42e-24,17;UBERON:0008947,3.42e-24,17;UBERON:0003258,3.42e-24,17;UBERON:0005157,2.09e-20,20;UBERON:0000065,2.25e-09,41;UBERON:0001004,4.02e-09,42;UBERON:0009569,2.87e-08,66;UBERON:0005177,5.57e-08,79;UBERON:0005911,7.71e-08,69;UBERON:0000025,3.62e-07,114;UBERON:0002394,5.73e-07,1;UBERON:0001281,5.73e-07,1;UBERON:0000353,5.73e-07,1;UBERON:0003497,5.73e-07,1;UBERON:0003909,5.73e-07,1;UBERON:0003928,5.73e-07,1;UBERON:0003835,5.73e-07,1;UBERON:0003513,5.73e-07,1;UBERON:0001280,5.73e-07,1;UBERON:0004647,5.73e-07,1;UBERON:0002294,5.73e-07,1;UBERON:0001173,5.73e-07,1;UBERON:0004912,5.73e-07,1;UBERON:0005171,5.73e-07,1;UBERON:0002100,8.75e-07,90|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0.573066879877513,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0.52091337055676,0,0,0,0,0,0.186399445825301,0,0,4.63783181922684,0,0.679971333707751,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0.890652834388949,0.173485326766136,0,0.230615497256059,0.150722640552623,0.940709657085638,0.251333182659351,0.494389935468748,0,0,0.323533699894818,0.441683036920787,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509196819251581,0,0.252722758433675,0.210441855886474,0.130120442962704,0,0,0.150704817835715,0.340182495756639,0.2562274405697,0,0.258703370739016,0.215567992932842,0,0.175951124163949,0,0,0,0.411564272815887,0.199034266818493,0,0,0,0.207125772535502,0,0.36012412292203,0.710234206755631,0.393528463494808,0.308534225774757,0.930135779001631,0.536546802799238,0.350296027101508,0.329119699826961,0.492502392237286,1.37816976227955,1.46199987425332,0.878200461164203,1.20785776884335,0,0.205809224758569,0,0,0,0.696710015581316,0,0.403367049246685,0.444756087689741,0,0,0.164698954724011,0,0.198956472041151,0.19496408711912,0,0,0,0.189667900953082,0.228497025219458,0,0.814605311381257,0.193952487167626,0.631222379012867,0.822074982615345,0.885660887877613,0.470996183524124,0.740382983530803,0.592905254174298,0,0,0,0.202860121388503,0,0,0.287696137450811,0.486405680325106,0.549122826376163,1.43768206527355,0.744281895337007,0.312037673114561,0,0.358794827043824,0,2.58654466233247,0.189491411770485,0.325929952884052,0.678980343100753,1.17345124144251,0.670025029767263,1.19021820443007,0.780534591431195,1.41871629695572,3.10050565508285,1.43509291791738,3.60499292374624,2.93564469172023,3.61622646453779,0,0,0,0.551873492609465,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.567760340833074,0.178065603667255,0,0,0,0,0,0,0.295301892880773,0.922305443831782,1.03371317267288,0,0,0.316036757935816,0,0,0.340439605753788,0,0,0.214337035031592,0.354680467284547,0.356737635204141,0.164549020602121,0.304464949114599,0.704015124191131,0.42366414172764,0,0.49465875882444,0,0.301564624640779,0,0.328281799490123,0.291480836629851,0,0,0.412773735926445,0,0.188368457004691,0.410082683163076,0.228778173206523,0,0,0,0,0.158167996790568,0.609958401380546,0.108005340821801,0.627264888043406,0,0.134864346384821,0.495920734352016,0,0,0.621339313086926,0,0.149516546043979,0.165458490457098,0.194451188344048,0.645799117388655,0.168956125490778,0.117357238645754,0,0.209718688851422,0.241584120826006,0,0,0.202725215290164,0.102710957164827,0.129920822977795,0,0,0,0.147689527174577,0.201932899896295,0,0,0,0,0,0.226730383615211,0,0,0,0,0.563047426353546,0,0,0,0,0.460325236507177,0,0,0,0,0,0,0,0.51776031175182,0,0,0,0.243106717068294,0,0.183843508450014,0.44449345560323,0.412070114477788,0.320919209591815,0,1.01391719956096,0.565879024158229,0.187283014939765,0.512201219238954,0.34461281373368,0,0.347652977834566,0.38581844092741,0,0,1.37147700954166,0.354951612318675,0.953744759789284,0.436039249896986,0.376437521661322,0.338458431566706,0.365855945745545,0.526139422875686,0.543216455383447,0,0.118635018124174,0.394017929502254,0.409231043169689,0.619747364743864,0.385813221962283,0,0.467863216890817,0.214871054048298,0.382576664137687,0.882365676478062,0.231867835620421|short_description=p5@Ptprb}} | ||
|EntrezGene=19263 | |||
|HGNC= | |||
|MCL_coexpression_id=94 | |||
|UniProt=E9Q3N7,Q9CX77 | |||
|association_with_transcript=-18bp_to_ENSMUST00000020363,uc007hbu.1_5end | |||
|description=CAGE_peak_5_at_Ptprb_5end | |||
|id=chr10:115712547..115712560,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000213,5.73e-07,1;CL:0002078,5.73e-07,1;CL:0000115,5.73e-07,1;CL:0002262,5.73e-07,1;CL:1000398,5.73e-07,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002048!2.23e-10!14;UBERON:0000117!2.23e-10!14;UBERON:0000171!2.23e-10!14;UBERON:0000170!2.23e-10!14;UBERON:0005597!2.23e-10!14;UBERON:0000118!2.23e-10!14;UBERON:0009569!1.22e-09!66;UBERON:0005153!8.95e-09!17;UBERON:0005178!1.99e-07!17;UBERON:0005181!1.99e-07!17;UBERON:0002224!1.99e-07!17;UBERON:0000915!1.99e-07!17;UBERON:0008947!1.99e-07!17;UBERON:0003258!1.99e-07!17;UBERON:0005157!2.29e-07!27;UBERON:0005177!4.69e-07!85 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002048,1.35e-29,14;UBERON:0000117,1.35e-29,14;UBERON:0000171,1.35e-29,14;UBERON:0000170,1.35e-29,14;UBERON:0005597,1.35e-29,14;UBERON:0000118,1.35e-29,14;UBERON:0005153,3.42e-24,17;UBERON:0005178,3.42e-24,17;UBERON:0005181,3.42e-24,17;UBERON:0002224,3.42e-24,17;UBERON:0000915,3.42e-24,17;UBERON:0008947,3.42e-24,17;UBERON:0003258,3.42e-24,17;UBERON:0005157,2.09e-20,20;UBERON:0000065,2.25e-09,41;UBERON:0001004,4.02e-09,42;UBERON:0009569,2.87e-08,66;UBERON:0005177,5.57e-08,79;UBERON:0005911,7.71e-08,69;UBERON:0000025,3.62e-07,114;UBERON:0002394,5.73e-07,1;UBERON:0001281,5.73e-07,1;UBERON:0000353,5.73e-07,1;UBERON:0003497,5.73e-07,1;UBERON:0003909,5.73e-07,1;UBERON:0003928,5.73e-07,1;UBERON:0003835,5.73e-07,1;UBERON:0003513,5.73e-07,1;UBERON:0001280,5.73e-07,1;UBERON:0004647,5.73e-07,1;UBERON:0002294,5.73e-07,1;UBERON:0001173,5.73e-07,1;UBERON:0004912,5.73e-07,1;UBERON:0005171,5.73e-07,1;UBERON:0002100,8.75e-07,90 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0.573066879877513,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0.52091337055676,0,0,0,0,0,0.186399445825301,0,0,4.63783181922684,0,0.679971333707751,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0.890652834388949,0.173485326766136,0,0.230615497256059,0.150722640552623,0.940709657085638,0.251333182659351,0.494389935468748,0,0,0.323533699894818,0.441683036920787,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509196819251581,0,0.252722758433675,0.210441855886474,0.130120442962704,0,0,0.150704817835715,0.340182495756639,0.2562274405697,0,0.258703370739016,0.215567992932842,0,0.175951124163949,0,0,0,0.411564272815887,0.199034266818493,0,0,0,0.207125772535502,0,0.36012412292203,0.710234206755631,0.393528463494808,0.308534225774757,0.930135779001631,0.536546802799238,0.350296027101508,0.329119699826961,0.492502392237286,1.37816976227955,1.46199987425332,0.878200461164203,1.20785776884335,0,0.205809224758569,0,0,0,0.696710015581316,0,0.403367049246685,0.444756087689741,0,0,0.164698954724011,0,0.198956472041151,0.19496408711912,0,0,0,0.189667900953082,0.228497025219458,0,0.814605311381257,0.193952487167626,0.631222379012867,0.822074982615345,0.885660887877613,0.470996183524124,0.740382983530803,0.592905254174298,0,0,0,0.202860121388503,0,0,0.287696137450811,0.486405680325106,0.549122826376163,1.43768206527355,0.744281895337007,0.312037673114561,0,0.358794827043824,0,2.58654466233247,0.189491411770485,0.325929952884052,0.678980343100753,1.17345124144251,0.670025029767263,1.19021820443007,0.780534591431195,1.41871629695572,3.10050565508285,1.43509291791738,3.60499292374624,2.93564469172023,3.61622646453779,0,0,0,0.551873492609465,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.567760340833074,0.178065603667255,0,0,0,0,0,0,0.295301892880773,0.922305443831782,1.03371317267288,0,0,0.316036757935816,0,0,0.340439605753788,0,0,0.214337035031592,0.354680467284547,0.356737635204141,0.164549020602121,0.304464949114599,0.704015124191131,0.42366414172764,0,0.49465875882444,0,0.301564624640779,0,0.328281799490123,0.291480836629851,0,0,0.412773735926445,0,0.188368457004691,0.410082683163076,0.228778173206523,0,0,0,0,0.158167996790568,0.609958401380546,0.108005340821801,0.627264888043406,0,0.134864346384821,0.495920734352016,0,0,0.621339313086926,0,0.149516546043979,0.165458490457098,0.194451188344048,0.645799117388655,0.168956125490778,0.117357238645754,0,0.209718688851422,0.241584120826006,0,0,0.202725215290164,0.102710957164827,0.129920822977795,0,0,0,0.147689527174577,0.201932899896295,0,0,0,0,0,0.226730383615211,0,0,0,0,0.563047426353546,0,0,0,0,0.460325236507177,0,0,0,0,0,0,0,0.51776031175182,0,0,0,0.243106717068294,0,0.183843508450014,0.44449345560323,0.412070114477788,0.320919209591815,0,1.01391719956096,0.565879024158229,0.187283014939765,0.512201219238954,0.34461281373368,0,0.347652977834566,0.38581844092741,0,0,1.37147700954166,0.354951612318675,0.953744759789284,0.436039249896986,0.376437521661322,0.338458431566706,0.365855945745545,0.526139422875686,0.543216455383447,0,0.118635018124174,0.394017929502254,0.409231043169689,0.619747364743864,0.385813221962283,0,0.467863216890817,0.214871054048298,0.382576664137687,0.882365676478062,0.231867835620421 | |||
|short_description=p5@Ptprb | |||
}} |
Revision as of 15:46, 12 September 2013
Short description: | p5@Ptprb |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Ptprb_5end |
Coexpression cluster: | MCL_coexpression_mm9:94 |
Association with transcript: | -18bp_to_ENSMUST00000020363, uc007hbu.1_5end |
EntrezGene: | Ptprb |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 5.73e-07 | 1 |
meso-epithelial cell | 5.73e-07 | 1 |
endothelial cell | 5.73e-07 | 1 |
endothelial cell of sinusoid | 5.73e-07 | 1 |
endothelial cell of hepatic sinusoid | 5.73e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
lung | 1.35e-29 | 14 |
respiratory tube | 1.35e-29 | 14 |
respiration organ | 1.35e-29 | 14 |
pair of lungs | 1.35e-29 | 14 |
lung primordium | 1.35e-29 | 14 |
lung bud | 1.35e-29 | 14 |
epithelial bud | 3.42e-24 | 17 |
thoracic cavity element | 3.42e-24 | 17 |
thoracic segment organ | 3.42e-24 | 17 |
thoracic cavity | 3.42e-24 | 17 |
thoracic segment of trunk | 3.42e-24 | 17 |
respiratory primordium | 3.42e-24 | 17 |
endoderm of foregut | 3.42e-24 | 17 |
epithelial fold | 2.09e-20 | 20 |
respiratory tract | 2.25e-09 | 41 |
respiratory system | 4.02e-09 | 42 |
subdivision of trunk | 2.87e-08 | 66 |
trunk region element | 5.57e-08 | 79 |
endo-epithelium | 7.71e-08 | 69 |
tube | 3.62e-07 | 114 |
bile duct | 5.73e-07 | 1 |
hepatic sinusoid | 5.73e-07 | 1 |
parenchyma | 5.73e-07 | 1 |
abdomen blood vessel | 5.73e-07 | 1 |
sinusoid | 5.73e-07 | 1 |
digestive system duct | 5.73e-07 | 1 |
abdominal segment blood vessel | 5.73e-07 | 1 |
trunk blood vessel | 5.73e-07 | 1 |
liver parenchyma | 5.73e-07 | 1 |
liver lobule | 5.73e-07 | 1 |
biliary system | 5.73e-07 | 1 |
biliary tree | 5.73e-07 | 1 |
biliary bud | 5.73e-07 | 1 |
hepatic duct | 5.73e-07 | 1 |
trunk | 8.75e-07 | 90 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.