FFCP PHASE1:Hg19::chr2:27246194..27246208,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C16|description=CAGE_peak_at_chr2:27246194..27246208,+|id=chr2:27246194..27246208,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002575;6.17e-09;2|ontology_enrichment_celltype_v019_2=CL:0002575,6.94e-09,2|ontology_enrichment_development_v019=UBERON:0005425;1.53e-16;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!7.50e-24!57;UBERON:0005068!7.50e-24!57;UBERON:0006241!7.50e-24!57;UBERON:0007135!7.50e-24!57;UBERON:0000955!5.41e-19!69;UBERON:0006238!5.41e-19!69;UBERON:0001017!6.52e-19!82;UBERON:0002616!1.95e-18!59;UBERON:0002780!3.09e-18!41;UBERON:0001890!3.09e-18!41;UBERON:0006240!3.09e-18!41;UBERON:0005743!7.77e-18!86;UBERON:0003080!1.64e-17!42;UBERON:0007023!2.81e-17!115;UBERON:0003075!3.66e-17!86;UBERON:0007284!3.66e-17!86;UBERON:0002020!1.02e-16!34;UBERON:0003528!1.02e-16!34;UBERON:0001893!2.52e-16!34;UBERON:0000073!4.32e-16!94;UBERON:0001016!4.32e-16!94;UBERON:0002346!1.36e-15!90;UBERON:0002791!1.38e-15!33;UBERON:0001869!1.67e-15!32;UBERON:0000033!3.91e-14!123;UBERON:0002619!3.34e-13!22;UBERON:0000153!1.50e-12!129;UBERON:0007811!1.50e-12!129;UBERON:0000956!6.78e-12!25;UBERON:0000203!6.78e-12!25;UBERON:0001950!1.30e-11!20;UBERON:0004121!1.45e-11!169;UBERON:0003056!5.11e-11!61;UBERON:0000924!8.54e-11!173;UBERON:0006601!8.54e-11!173;UBERON:0004111!5.92e-10!241;UBERON:0000025!2.77e-09!194;UBERON:0000475!3.21e-09!365;UBERON:0003076!1.50e-07!15;UBERON:0003057!1.50e-07!15;UBERON:0000477!2.79e-07!286;UBERON:0000483!4.76e-07!309;UBERON:0000467!7.50e-07!625;UBERON:0000480!9.17e-07!626;UBERON:0001871!9.67e-07!7;UBERON:0000119!9.67e-07!312|ontology_enrichment_uberon_v019=UBERON:0002902;1.53e-16;1!UBERON:0000941;1.53e-16;1!UBERON:0001785;1.53e-16;1!UBERON:0002464;1.53e-16;1!UBERON:0004904;1.53e-16;1!UBERON:0001021;1.53e-16;1!UBERON:0009899;1.53e-16;1!UBERON:0002021;3.88e-13;5!UBERON:0001950;5.44e-12;20!UBERON:0002619;5.66e-11;22!UBERON:0001871;8.53e-10;6!UBERON:0000956;9.71e-10;25!UBERON:0000203;9.71e-10;25!UBERON:0002771;3.43e-09;2!UBERON:0003714;6.17e-09;2!UBERON:0005162;6.17e-09;2!UBERON:0000122;6.17e-09;2!UBERON:0001893;1.75e-07;34!UBERON:0002791;3.02e-07;32!UBERON:0001869;3.02e-07;32|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.21e-16,1;UBERON:0001785,1.21e-16,1;UBERON:0002464,1.21e-16,1;UBERON:0004904,1.21e-16,1;UBERON:0001021,1.21e-16,1;UBERON:0003902,1.21e-16,1;UBERON:0005425,1.21e-16,1;UBERON:0002902,1.65e-16,1;UBERON:0009899,1.65e-16,1;UBERON:0002021,4.66e-13,5;UBERON:0001950,6.56e-12,20;UBERON:0002619,6.71e-11,22;UBERON:0001871,9.95e-10,6;UBERON:0000956,1.13e-09,25;UBERON:0000203,1.13e-09,25;UBERON:0002771,3.43e-09,2;UBERON:0003714,5.49e-09,2;UBERON:0005162,5.49e-09,2;UBERON:0000122,5.49e-09,2;UBERON:0002791,1.13e-07,32;UBERON:0001869,1.13e-07,32;UBERON:0003528,3.01e-07,34;UBERON:0002020,3.01e-07,34;UBERON:0001893,3.01e-07,34|phase1_expression=0,0.642301571672949,0,1.0007329835313,0,0,0,0.631719873426831,0.261185628199839,0,0,0,0,0,0,0,0,0.730310090387373,0.487932798790507,0,0,0.313454721478088,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0.739508020333575,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0.232429036905685,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.196468613246569,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0.24406205754817,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0.12663051166458,0,0,0.354668382198357,0,0,0.49333509683432,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0.122834317311768,0.206651562351531,0,0.247266929278557,0,0,0.168336113954066,0,0,0,0,0.150238058906597,0.113432183160021,0,0,0,0,0.103052529238439,0.257640540045629,0.18611685633159,0,0.0974370051611986,0,0.0920498986422993,0.161646056818812,0,0.10075209822764,0,0.193260853163297,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0.721879481669586,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94848165003288,0,0,0,0.171567810298526,0.219500570817251,0,0.100528972411631,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0.283550194484773,0.179117045405697,0,0,0,0,0.414656231081544,0.432359860250884,0.50496973370552,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0.845302752556,0,2.08014873822732,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579125226670317,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0.12269149171914,0,0,0,0.892144943985809,0.157702415033935,0,0.300946099727719,0,0,0.664225598535437,0,0.173767228936166,0,1.02943027143257,0,0.215714200818617,0,0,0,0,0.248107807818777,0,0,0.256278298511402,0,0,0,0.308419387605311,0,0,0,0.232420756919918,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C16 | |||
|description=CAGE_peak_at_chr2:27246194..27246208,+ | |||
|id=chr2:27246194..27246208,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002575;6.17e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002575,6.94e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.53e-16;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!7.50e-24!57;UBERON:0005068!7.50e-24!57;UBERON:0006241!7.50e-24!57;UBERON:0007135!7.50e-24!57;UBERON:0000955!5.41e-19!69;UBERON:0006238!5.41e-19!69;UBERON:0001017!6.52e-19!82;UBERON:0002616!1.95e-18!59;UBERON:0002780!3.09e-18!41;UBERON:0001890!3.09e-18!41;UBERON:0006240!3.09e-18!41;UBERON:0005743!7.77e-18!86;UBERON:0003080!1.64e-17!42;UBERON:0007023!2.81e-17!115;UBERON:0003075!3.66e-17!86;UBERON:0007284!3.66e-17!86;UBERON:0002020!1.02e-16!34;UBERON:0003528!1.02e-16!34;UBERON:0001893!2.52e-16!34;UBERON:0000073!4.32e-16!94;UBERON:0001016!4.32e-16!94;UBERON:0002346!1.36e-15!90;UBERON:0002791!1.38e-15!33;UBERON:0001869!1.67e-15!32;UBERON:0000033!3.91e-14!123;UBERON:0002619!3.34e-13!22;UBERON:0000153!1.50e-12!129;UBERON:0007811!1.50e-12!129;UBERON:0000956!6.78e-12!25;UBERON:0000203!6.78e-12!25;UBERON:0001950!1.30e-11!20;UBERON:0004121!1.45e-11!169;UBERON:0003056!5.11e-11!61;UBERON:0000924!8.54e-11!173;UBERON:0006601!8.54e-11!173;UBERON:0004111!5.92e-10!241;UBERON:0000025!2.77e-09!194;UBERON:0000475!3.21e-09!365;UBERON:0003076!1.50e-07!15;UBERON:0003057!1.50e-07!15;UBERON:0000477!2.79e-07!286;UBERON:0000483!4.76e-07!309;UBERON:0000467!7.50e-07!625;UBERON:0000480!9.17e-07!626;UBERON:0001871!9.67e-07!7;UBERON:0000119!9.67e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0002902;1.53e-16;1!UBERON:0000941;1.53e-16;1!UBERON:0001785;1.53e-16;1!UBERON:0002464;1.53e-16;1!UBERON:0004904;1.53e-16;1!UBERON:0001021;1.53e-16;1!UBERON:0009899;1.53e-16;1!UBERON:0002021;3.88e-13;5!UBERON:0001950;5.44e-12;20!UBERON:0002619;5.66e-11;22!UBERON:0001871;8.53e-10;6!UBERON:0000956;9.71e-10;25!UBERON:0000203;9.71e-10;25!UBERON:0002771;3.43e-09;2!UBERON:0003714;6.17e-09;2!UBERON:0005162;6.17e-09;2!UBERON:0000122;6.17e-09;2!UBERON:0001893;1.75e-07;34!UBERON:0002791;3.02e-07;32!UBERON:0001869;3.02e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.21e-16,1;UBERON:0001785,1.21e-16,1;UBERON:0002464,1.21e-16,1;UBERON:0004904,1.21e-16,1;UBERON:0001021,1.21e-16,1;UBERON:0003902,1.21e-16,1;UBERON:0005425,1.21e-16,1;UBERON:0002902,1.65e-16,1;UBERON:0009899,1.65e-16,1;UBERON:0002021,4.66e-13,5;UBERON:0001950,6.56e-12,20;UBERON:0002619,6.71e-11,22;UBERON:0001871,9.95e-10,6;UBERON:0000956,1.13e-09,25;UBERON:0000203,1.13e-09,25;UBERON:0002771,3.43e-09,2;UBERON:0003714,5.49e-09,2;UBERON:0005162,5.49e-09,2;UBERON:0000122,5.49e-09,2;UBERON:0002791,1.13e-07,32;UBERON:0001869,1.13e-07,32;UBERON:0003528,3.01e-07,34;UBERON:0002020,3.01e-07,34;UBERON:0001893,3.01e-07,34 | |||
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| |||
|short_description=p@chr2:27246194..27246208,+ | |||
}} |
Revision as of 18:04, 12 September 2013
Short description: | p@chr2:27246194..27246208, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:27246194..27246208, + |
Coexpression cluster: | C16_medial_amygdala_occipital_parietal_olfactory_putamen_brain |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system pericyte | 6.94e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 1.21e-16 | 1 |
cranial nerve | 1.21e-16 | 1 |
nerve trunk | 1.21e-16 | 1 |
nerve connecting eye with brain | 1.21e-16 | 1 |
nerve | 1.21e-16 | 1 |
retinal neural layer | 1.21e-16 | 1 |
presumptive neural retina | 1.21e-16 | 1 |
occipital pole | 1.65e-16 | 1 |
pole of cerebral hemisphere | 1.65e-16 | 1 |
occipital lobe | 4.66e-13 | 5 |
neocortex | 6.56e-12 | 20 |
regional part of cerebral cortex | 6.71e-11 | 22 |
temporal lobe | 9.95e-10 | 6 |
cerebral cortex | 1.13e-09 | 25 |
pallium | 1.13e-09 | 25 |
middle temporal gyrus | 3.43e-09 | 2 |
neural tissue | 5.49e-09 | 2 |
multi cell component structure | 5.49e-09 | 2 |
neuron projection bundle | 5.49e-09 | 2 |
regional part of telencephalon | 1.13e-07 | 32 |
cerebral hemisphere | 1.13e-07 | 32 |
brain grey matter | 3.01e-07 | 34 |
gray matter | 3.01e-07 | 34 |
telencephalon | 3.01e-07 | 34 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.