FFCP PHASE1:Hg19::chr3:119500941..119500961,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=8856|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7968|TSSclassifier=S|UniProt=|association_with_transcript=59bp_to_ENST00000474090_5end|coexpression_cluster_id=C25|description=CAGE_peak_1_at_NR1I2_5end|id=chr3:119500941..119500961,+|ontology_enrichment_celltype=CL:0000181!5.69e-19!12;CL:0000417!5.69e-19!12;CL:0000668!5.69e-19!12;CL:0000414!5.69e-19!12;CL:0000412!5.69e-19!12;CL:0000182!5.69e-19!12;CL:0000223!1.42e-10!59|ontology_enrichment_celltype_v019=CL:0000182;3.86e-34;12|ontology_enrichment_celltype_v019_2=CL:0000182,3.67e-34,12|ontology_enrichment_development_v019=UBERON:0004161;2.70e-37;11!UBERON:0009497;1.81e-31;13!UBERON:0003104;1.43e-12;31!UBERON:0006242;2.84e-10;1!UBERON:0001045;7.89e-10;1!UBERON:0001041;8.61e-10;30|ontology_enrichment_disease=DOID:4929!3.50e-10!2;DOID:3119!7.41e-08!14|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0009854!2.40e-27!23;UBERON:0005409!1.58e-26!35;UBERON:0000160!2.45e-26!27;UBERON:0009497!4.54e-25!25;UBERON:0000015!4.54e-25!25;UBERON:0002423!4.54e-25!25;UBERON:0006235!4.54e-25!25;UBERON:0004161!4.54e-25!25;UBERON:0008835!5.00e-24!22;UBERON:0003894!5.00e-24!22;UBERON:0009856!6.74e-24!26;UBERON:0007499!7.08e-21!25;UBERON:0000059!8.05e-21!11;UBERON:0002107!4.22e-19!19;UBERON:0006925!4.22e-19!19;UBERON:0008836!4.22e-19!19;UBERON:0004921!8.56e-19!129;UBERON:0004185!8.56e-19!129;UBERON:0001007!1.33e-17!155;UBERON:0001555!1.33e-17!155;UBERON:0007026!1.33e-17!155;UBERON:0004119!5.42e-17!169;UBERON:0000925!5.42e-17!169;UBERON:0006595!5.42e-17!169;UBERON:0003929!3.01e-16!54;UBERON:0004907!2.90e-15!5;UBERON:0005057!1.60e-13!26;UBERON:0001155!1.89e-13!9;UBERON:0002368!7.50e-12!35;UBERON:0001052!4.33e-11!4;UBERON:0002365!4.41e-11!31;UBERON:0002330!4.41e-11!31;UBERON:0005911!5.19e-11!82;UBERON:0000949!1.12e-10!45;UBERON:0000077!7.41e-10!130;UBERON:0002108!5.91e-08!14;UBERON:0001041!1.77e-07!98;UBERON:0005172!5.98e-07!55;UBERON:0005173!5.98e-07!55|ontology_enrichment_uberon_v019=UBERON:0002107;5.27e-35;19!UBERON:0006925;5.27e-35;19!UBERON:0002423;1.18e-32;25!UBERON:0000160;1.17e-30;17!UBERON:0005409;8.70e-24;22!UBERON:0002365;2.23e-20;31!UBERON:0002330;2.23e-20;31!UBERON:0000059;4.69e-20;11!UBERON:0002368;6.94e-18;33!UBERON:0002108;7.11e-17;4!UBERON:0001155;4.77e-16;9!UBERON:0004921;9.88e-15;33!UBERON:0001007;1.77e-14;81!UBERON:0000949;7.70e-13;43!UBERON:0001154;7.89e-10;1!UBERON:0001153;7.89e-10;1!UBERON:0009854;7.89e-10;1!UBERON:0005172;6.87e-09;52!UBERON:0005173;6.87e-09;52!UBERON:0002417;1.11e-08;58!UBERON:0000916;1.11e-08;58!UBERON:0004907;7.51e-08;5|ontology_enrichment_uberon_v019_2=UBERON:0009854,1.80e-35,23;UBERON:0002107,4.66e-35,19;UBERON:0006925,4.66e-35,19;UBERON:0008836,4.66e-35,19;UBERON:0009497,1.06e-32,25;UBERON:0000015,1.06e-32,25;UBERON:0002423,1.06e-32,25;UBERON:0006235,1.06e-32,25;UBERON:0004161,1.06e-32,25;UBERON:0009856,3.23e-31,26;UBERON:0000160,1.26e-30,17;UBERON:0008835,4.03e-30,22;UBERON:0003894,4.03e-30,22;UBERON:0007499,2.29e-26,25;UBERON:0002365,4.94e-21,31;UBERON:0002330,4.94e-21,31;UBERON:0005409,6.61e-21,25;UBERON:0000059,5.18e-20,11;UBERON:0002368,1.72e-18,35;UBERON:0004921,2.76e-18,118;UBERON:0002108,6.92e-17,4;UBERON:0001007,2.31e-16,145;UBERON:0001555,2.31e-16,145;UBERON:0007026,2.31e-16,145;UBERON:0001155,4.96e-16,9;UBERON:0004119,1.48e-14,160;UBERON:0000925,1.48e-14,160;UBERON:0006595,1.48e-14,160;UBERON:0003929,2.36e-14,54;UBERON:0005172,2.36e-14,54;UBERON:0005173,2.36e-14,54;UBERON:0000949,4.16e-14,45;UBERON:0002417,9.10e-13,60;UBERON:0000916,9.10e-13,60;UBERON:0002530,1.84e-10,59;UBERON:0001154,8.24e-10,1;UBERON:0001153,8.24e-10,1;UBERON:0001045,8.24e-10,1;UBERON:0011216,2.00e-09,223;UBERON:0005911,6.17e-09,82;UBERON:0004907,8.04e-08,5;UBERON:0005177,5.70e-07,101|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.1404027857465,1.96565443335525,6.49868897349544,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.29731237272711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16530741786592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=8856 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7968 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=59bp_to_ENST00000474090_5end | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_1_at_NR1I2_5end | |||
|id=chr3:119500941..119500961,+ | |||
|ontology_enrichment_celltype=CL:0000181!5.69e-19!12;CL:0000417!5.69e-19!12;CL:0000668!5.69e-19!12;CL:0000414!5.69e-19!12;CL:0000412!5.69e-19!12;CL:0000182!5.69e-19!12;CL:0000223!1.42e-10!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;3.86e-34;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.67e-34,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.70e-37;11!UBERON:0009497;1.81e-31;13!UBERON:0003104;1.43e-12;31!UBERON:0006242;2.84e-10;1!UBERON:0001045;7.89e-10;1!UBERON:0001041;8.61e-10;30 | |||
|ontology_enrichment_disease=DOID:4929!3.50e-10!2;DOID:3119!7.41e-08!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009854!2.40e-27!23;UBERON:0005409!1.58e-26!35;UBERON:0000160!2.45e-26!27;UBERON:0009497!4.54e-25!25;UBERON:0000015!4.54e-25!25;UBERON:0002423!4.54e-25!25;UBERON:0006235!4.54e-25!25;UBERON:0004161!4.54e-25!25;UBERON:0008835!5.00e-24!22;UBERON:0003894!5.00e-24!22;UBERON:0009856!6.74e-24!26;UBERON:0007499!7.08e-21!25;UBERON:0000059!8.05e-21!11;UBERON:0002107!4.22e-19!19;UBERON:0006925!4.22e-19!19;UBERON:0008836!4.22e-19!19;UBERON:0004921!8.56e-19!129;UBERON:0004185!8.56e-19!129;UBERON:0001007!1.33e-17!155;UBERON:0001555!1.33e-17!155;UBERON:0007026!1.33e-17!155;UBERON:0004119!5.42e-17!169;UBERON:0000925!5.42e-17!169;UBERON:0006595!5.42e-17!169;UBERON:0003929!3.01e-16!54;UBERON:0004907!2.90e-15!5;UBERON:0005057!1.60e-13!26;UBERON:0001155!1.89e-13!9;UBERON:0002368!7.50e-12!35;UBERON:0001052!4.33e-11!4;UBERON:0002365!4.41e-11!31;UBERON:0002330!4.41e-11!31;UBERON:0005911!5.19e-11!82;UBERON:0000949!1.12e-10!45;UBERON:0000077!7.41e-10!130;UBERON:0002108!5.91e-08!14;UBERON:0001041!1.77e-07!98;UBERON:0005172!5.98e-07!55;UBERON:0005173!5.98e-07!55 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;5.27e-35;19!UBERON:0006925;5.27e-35;19!UBERON:0002423;1.18e-32;25!UBERON:0000160;1.17e-30;17!UBERON:0005409;8.70e-24;22!UBERON:0002365;2.23e-20;31!UBERON:0002330;2.23e-20;31!UBERON:0000059;4.69e-20;11!UBERON:0002368;6.94e-18;33!UBERON:0002108;7.11e-17;4!UBERON:0001155;4.77e-16;9!UBERON:0004921;9.88e-15;33!UBERON:0001007;1.77e-14;81!UBERON:0000949;7.70e-13;43!UBERON:0001154;7.89e-10;1!UBERON:0001153;7.89e-10;1!UBERON:0009854;7.89e-10;1!UBERON:0005172;6.87e-09;52!UBERON:0005173;6.87e-09;52!UBERON:0002417;1.11e-08;58!UBERON:0000916;1.11e-08;58!UBERON:0004907;7.51e-08;5 | |||
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|short_description=p1@NR1I2 | |||
}} |
Revision as of 21:03, 12 September 2013
Short description: | p1@NR1I2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_NR1I2_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 59bp_to_ENST00000474090_5end |
EntrezGene: | NR1I2 |
HGNC: | 7968 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.67e-34 | 12 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.