FFCP PHASE1:Mm9::chr11:97857177..97857249,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=217151|HGNC=|MCL_coexpression_id=118|UniProt=A2A541|association_with_transcript=0bp_to_ENSMUST00000107563_5end|description=CAGE_peak_1_at_Arl5c_5end|id=chr11:97857177..97857249,-|ontology_enrichment_celltype=CL:0000988!5.12e-08!32;CL:0002032!5.12e-08!32;CL:0000037!5.12e-08!32;CL:0000566!5.12e-08!32;CL:0000837!5.12e-08!32|ontology_enrichment_celltype_v019_2=CL:0000988,1.74e-10,32;CL:0002032,1.74e-10,32;CL:0000037,1.74e-10,32;CL:0000837,1.74e-10,32;CL:0000219,2.69e-08,54;CL:0002031,4.53e-08,25;CL:0002320,3.33e-07,46;CL:0000134,3.33e-07,46;CL:0000049,3.42e-07,19|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!7.75e-21!48;UBERON:0002390!1.92e-19!45;UBERON:0003061!1.92e-19!45;UBERON:0002405!2.55e-16!70;UBERON:0003081!1.04e-11!88;UBERON:0004177!4.14e-11!29;UBERON:0001474!1.29e-09!22;UBERON:0004765!1.29e-09!22;UBERON:0001434!1.29e-09!22;UBERON:0002371!3.16e-09!16;UBERON:0003408!5.70e-09!24;UBERON:0002370!1.24e-08!23;UBERON:0000974!1.24e-08!23;UBERON:0004807!1.24e-08!23;UBERON:0005058!1.24e-08!23;UBERON:0003351!1.24e-08!23;UBERON:0009113!1.24e-08!23;UBERON:0003295!1.24e-08!23;UBERON:0009722!1.24e-08!23;UBERON:0005562!1.24e-08!23;UBERON:0007690!1.24e-08!23;UBERON:0006562!4.00e-08!24;UBERON:0001557!4.00e-08!24;UBERON:0001042!4.00e-08!24;UBERON:0008814!4.00e-08!24;UBERON:0009145!4.00e-08!24;UBERON:0005057!8.38e-08!51;UBERON:0002204!9.88e-08!32;UBERON:0001004!6.85e-07!42|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.16e-24,48;UBERON:0002405,1.16e-24,48;UBERON:0002390,4.48e-23,45;UBERON:0003061,4.48e-23,45;UBERON:0004177,1.52e-13,29;UBERON:0005057,1.52e-13,29;UBERON:0003081,2.52e-13,87;UBERON:0003408,4.23e-11,24;UBERON:0002370,1.02e-10,23;UBERON:0000974,1.02e-10,23;UBERON:0004807,1.02e-10,23;UBERON:0005058,1.02e-10,23;UBERON:0003351,1.02e-10,23;UBERON:0009113,1.02e-10,23;UBERON:0003295,1.02e-10,23;UBERON:0009722,1.02e-10,23;UBERON:0005562,1.02e-10,23;UBERON:0007690,1.02e-10,23;UBERON:0000077,1.62e-10,35;UBERON:0002371,3.34e-10,16;UBERON:0001474,3.96e-10,22;UBERON:0004765,3.96e-10,22;UBERON:0001434,3.96e-10,22;UBERON:0006562,7.97e-10,24;UBERON:0001557,7.97e-10,24;UBERON:0001042,7.97e-10,24;UBERON:0008814,7.97e-10,24;UBERON:0009145,7.97e-10,24;UBERON:0000926,6.10e-09,120;UBERON:0004120,6.10e-09,120;UBERON:0006603,6.10e-09,120;UBERON:0001004,8.65e-09,42;UBERON:0000065,1.96e-08,41;UBERON:0001041,5.74e-08,80;UBERON:0002204,6.31e-08,32;UBERON:0000072,1.31e-07,27;UBERON:0002384,3.33e-07,46|phase1_expression=0.80074423552397,0.348975407639361,0.454999239389536,0,0,0,0,64.4325383973466,152.614974812407,212.764654426692,6.33506482434368,2.39316476986009,45.1969927018383,47.6441193183536,7.32841475994458,7.89653542820321,3.49780939064073,49.8430221266016,50.3209971333061,50.9267582157636,4.93251082876205,0,0,5.75972722056264,5.04700418347774,0.57423196411502,0,0,0.190023419456374,0.252030129759931,0.665191531965914,0,0,0,0,0,0,1.67412652294763,0.7813353445238,3.14114246384279,5.29408339227913,2.73218193983378,3.39857247121808,0.251793635951155,0.405507724878058,0.550640256485045,3.12956537739216,2.8343270329458,4.83309602015838,5.24960727500565,3.49966054063406,2.87505128729943,74.1599118775195,39.1695556686126,44.7004752859477,2.31533492432352,4.29800159908135,1.03134418455488,0,0,0.633831403506179,2.03306719241479,0,38.6956878431002,32.6325899647102,45.4707273565504,8.38880309451533,6.53171119046643,0.311068836925433,0.270011876663381,0.210324961351382,2.28520787523043,3.09215957332259,0.244981598429908,0.383381884072945,0,1.10115880999389,0.638436690425939,0.921639199537461,0.791317726381163,0.182975287204819,0.52091337055676,0.279182999001381,1.12552522006336,0.763991238884051,1.76777151284201,1.99320353118744,1.4911955666024,1.06016670666458,0.906858721281426,0.869593466105033,1.72084775396277,0,0,0,0,8.28622078777336,0,0.259786004602869,0,0.563373679106722,0,0,0,0,0,0,4.5673551887624,32.1082975722493,1.33597925158342,0.867426633830679,0.304465478312141,0.230615497256059,0.753613202763113,0.705532242814229,1.25666591329675,0.247194967734374,1.59059292611903,18.5768215909474,4.69123864847487,24.0717255121829,28.6076399349781,1.86391761218122,0.292780797011547,0.628340120440365,1.02182822083437,27.6772937608676,29.9951365496704,22.2372897377863,0.449371918214468,0.915001205637253,0.879580464790051,0.695297280769106,1.02286182932132,0.41557608911912,0.324482526135515,1.62942982160506,30.4797077994728,0.505445516867349,0.631325567659422,0.390361328888111,0.919608417733892,0.900310649026746,1.80845781402858,0.340182495756639,1.15302348256365,1.3118241438362,0.776110112217047,0,0.378212160335639,0.175951124163949,0.657587197282725,1.11218899690239,1.39300866608867,1.23469281844766,0.199034266818493,26.6841011179029,19.5584409407184,26.7113689431857,0.414251545071004,0.469052119962192,0.180062061461015,0,0.983821158737019,0.154267112887378,0.697601834251224,0.268273401399619,1.98501082024188,1.81015834904829,2.13417703302824,1.86458261955468,2.48539978623065,2.41505126820156,2.14730270016595,0.210289948564127,0.514523061896422,0.330418782983798,0.264450566663544,0.426576501070468,0.232236671860439,0.515469845288373,0.605050573870028,0.889512175379481,0.760902504450237,0.949058123089023,0.988193728344065,1.00534083520108,1.59165177632921,1.16978452271472,0,1.94524244887225,0.597423819763102,0.758671603812327,0.456994050438915,0,0,0.387904974335251,0.701358198903186,1.01178459398812,0.442830443938806,1.09899109488962,0.863780147452604,0,0.667380422864376,1.57247196090562,3.37293168577281,3.44862206360455,4.10001171579109,6.11102044275408,9.49397253587675,12.3222772349027,3.84385978463314,2.87536413054709,4.46569137202204,4.05648975048929,0.252578877947112,0.358794827043824,0.964887042726734,4.61882975416512,0.37898282354097,0.488894929326078,0.678980343100753,1.17345124144251,3.35012514883632,1.19021820443007,1.95133647857799,3.78324345854858,4.65075848262427,4.14582398509466,4.91589944147214,7.9435091658312,4.19482269886384,64.8402520938871,79.4102298375316,1.96705709207614,2.48343071674259,1.28440471990234,0.586058432961016,0,2.7771801992481,0.631016438832513,0.390438744296638,0.646270193198397,1.19484398976276,0.445597348164788,0.566153061577665,0.404810701674894,0.584511715822624,1.18586333383957,1.28528526568723,2.12910127812403,1.24645922567079,2.11753047159649,3.46437258242324,2.65490276679926,0.485561272309963,0.302323556964751,0,0.590603785761546,0.922305443831782,0.516856586336442,1.45413491791002,1.78248689192361,1.58018378967908,0,1.03135543248187,1.02131881726136,0.18006109403131,1.16422815404479,0.643011105094777,0.886701168211368,0.713475270408282,0.329098041204242,0.913394847343798,0.469343416127421,0.63549621259146,0.661585194164886,0.98931751764888,0.645857706783622,1.02531972377865,0.716234064018819,0.328281799490123,2.04036585640896,0.927126510052548,13.3279287022325,4.12773735926445,6.11141940320049,13.5625289043378,16.129918871081,19.2173665493479,11.3885548095883,15.3946597556024,10.2267980615274,0.954670618015114,0.474503990371703,0,0.432021363287205,1.88179466413022,0.218362563746178,0.944050424693745,1.98368293740806,1.30877970992015,1.55537967950151,4.97071450469541,0,0.897099276263873,0.330916980914195,1.36115831840833,0.774958940866387,1.18269287843545,1.17357238645754,0.2604087696879,0.314578033277133,0.483168241652012,0.288030006257865,135.25275962886,3.44632865993279,9.55211901632893,30.9211558687152,57.4675693092615,87.6184774585378,74.2807878033407,68.5279406090038,73.7055084621478,77.5023223681348,101.027837507114,104.474848153015,112.375431035905,143.174205172422,0.680191150845634,0,0,0,2.31827512838629,3.37828455812128,4.2124873581471,1.92931541171159,0.501572104035363,1.12950368523413,0.920650473014354,0,1.71853182343688,0.685082519770642,0,0,2.70192721934532,0.453142408984205,1.03552062350364,0.830298780673413,0,1.19513524027894,0.972426868273176,0.838452650511929,2.02227859295016,1.11123363900808,1.64828045791115,0.64183841918363,1.01078884705519,1.2673964994512,0.943131706930381,1.31098110457835,1.28050304809739,0.689225627467359,0.476293691283074,1.27472758539341,0.578727661391115,1.23625770240992,1.03039244094078,1.71434626192708,1.4198064492747,2.38436189947321,1.0174249164263,1.2234219453993,1.4384483341585,0.548783918618318,1.31534855718921,0.814824683075171,1.12228454331548,1.66089025373844,1.18205378850676,2.04615521584845,1.85924209423159,1.15743966588685,0.999242311751784,3.04111090979031,3.86767897286937,0.765153328275374,5.07360263974886,10.2021847672985|short_description=p1@Arl5c}} | ||
|EntrezGene=217151 | |||
|HGNC= | |||
|MCL_coexpression_id=118 | |||
|UniProt=A2A541 | |||
|association_with_transcript=0bp_to_ENSMUST00000107563_5end | |||
|description=CAGE_peak_1_at_Arl5c_5end | |||
|id=chr11:97857177..97857249,- | |||
|ontology_enrichment_celltype=CL:0000988!5.12e-08!32;CL:0002032!5.12e-08!32;CL:0000037!5.12e-08!32;CL:0000566!5.12e-08!32;CL:0000837!5.12e-08!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.74e-10,32;CL:0002032,1.74e-10,32;CL:0000037,1.74e-10,32;CL:0000837,1.74e-10,32;CL:0000219,2.69e-08,54;CL:0002031,4.53e-08,25;CL:0002320,3.33e-07,46;CL:0000134,3.33e-07,46;CL:0000049,3.42e-07,19 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!7.75e-21!48;UBERON:0002390!1.92e-19!45;UBERON:0003061!1.92e-19!45;UBERON:0002405!2.55e-16!70;UBERON:0003081!1.04e-11!88;UBERON:0004177!4.14e-11!29;UBERON:0001474!1.29e-09!22;UBERON:0004765!1.29e-09!22;UBERON:0001434!1.29e-09!22;UBERON:0002371!3.16e-09!16;UBERON:0003408!5.70e-09!24;UBERON:0002370!1.24e-08!23;UBERON:0000974!1.24e-08!23;UBERON:0004807!1.24e-08!23;UBERON:0005058!1.24e-08!23;UBERON:0003351!1.24e-08!23;UBERON:0009113!1.24e-08!23;UBERON:0003295!1.24e-08!23;UBERON:0009722!1.24e-08!23;UBERON:0005562!1.24e-08!23;UBERON:0007690!1.24e-08!23;UBERON:0006562!4.00e-08!24;UBERON:0001557!4.00e-08!24;UBERON:0001042!4.00e-08!24;UBERON:0008814!4.00e-08!24;UBERON:0009145!4.00e-08!24;UBERON:0005057!8.38e-08!51;UBERON:0002204!9.88e-08!32;UBERON:0001004!6.85e-07!42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.16e-24,48;UBERON:0002405,1.16e-24,48;UBERON:0002390,4.48e-23,45;UBERON:0003061,4.48e-23,45;UBERON:0004177,1.52e-13,29;UBERON:0005057,1.52e-13,29;UBERON:0003081,2.52e-13,87;UBERON:0003408,4.23e-11,24;UBERON:0002370,1.02e-10,23;UBERON:0000974,1.02e-10,23;UBERON:0004807,1.02e-10,23;UBERON:0005058,1.02e-10,23;UBERON:0003351,1.02e-10,23;UBERON:0009113,1.02e-10,23;UBERON:0003295,1.02e-10,23;UBERON:0009722,1.02e-10,23;UBERON:0005562,1.02e-10,23;UBERON:0007690,1.02e-10,23;UBERON:0000077,1.62e-10,35;UBERON:0002371,3.34e-10,16;UBERON:0001474,3.96e-10,22;UBERON:0004765,3.96e-10,22;UBERON:0001434,3.96e-10,22;UBERON:0006562,7.97e-10,24;UBERON:0001557,7.97e-10,24;UBERON:0001042,7.97e-10,24;UBERON:0008814,7.97e-10,24;UBERON:0009145,7.97e-10,24;UBERON:0000926,6.10e-09,120;UBERON:0004120,6.10e-09,120;UBERON:0006603,6.10e-09,120;UBERON:0001004,8.65e-09,42;UBERON:0000065,1.96e-08,41;UBERON:0001041,5.74e-08,80;UBERON:0002204,6.31e-08,32;UBERON:0000072,1.31e-07,27;UBERON:0002384,3.33e-07,46 | |||
|phase1_expression=0.80074423552397,0.348975407639361,0.454999239389536,0,0,0,0,64.4325383973466,152.614974812407,212.764654426692,6.33506482434368,2.39316476986009,45.1969927018383,47.6441193183536,7.32841475994458,7.89653542820321,3.49780939064073,49.8430221266016,50.3209971333061,50.9267582157636,4.93251082876205,0,0,5.75972722056264,5.04700418347774,0.57423196411502,0,0,0.190023419456374,0.252030129759931,0.665191531965914,0,0,0,0,0,0,1.67412652294763,0.7813353445238,3.14114246384279,5.29408339227913,2.73218193983378,3.39857247121808,0.251793635951155,0.405507724878058,0.550640256485045,3.12956537739216,2.8343270329458,4.83309602015838,5.24960727500565,3.49966054063406,2.87505128729943,74.1599118775195,39.1695556686126,44.7004752859477,2.31533492432352,4.29800159908135,1.03134418455488,0,0,0.633831403506179,2.03306719241479,0,38.6956878431002,32.6325899647102,45.4707273565504,8.38880309451533,6.53171119046643,0.311068836925433,0.270011876663381,0.210324961351382,2.28520787523043,3.09215957332259,0.244981598429908,0.383381884072945,0,1.10115880999389,0.638436690425939,0.921639199537461,0.791317726381163,0.182975287204819,0.52091337055676,0.279182999001381,1.12552522006336,0.763991238884051,1.76777151284201,1.99320353118744,1.4911955666024,1.06016670666458,0.906858721281426,0.869593466105033,1.72084775396277,0,0,0,0,8.28622078777336,0,0.259786004602869,0,0.563373679106722,0,0,0,0,0,0,4.5673551887624,32.1082975722493,1.33597925158342,0.867426633830679,0.304465478312141,0.230615497256059,0.753613202763113,0.705532242814229,1.25666591329675,0.247194967734374,1.59059292611903,18.5768215909474,4.69123864847487,24.0717255121829,28.6076399349781,1.86391761218122,0.292780797011547,0.628340120440365,1.02182822083437,27.6772937608676,29.9951365496704,22.2372897377863,0.449371918214468,0.915001205637253,0.879580464790051,0.695297280769106,1.02286182932132,0.41557608911912,0.324482526135515,1.62942982160506,30.4797077994728,0.505445516867349,0.631325567659422,0.390361328888111,0.919608417733892,0.900310649026746,1.80845781402858,0.340182495756639,1.15302348256365,1.3118241438362,0.776110112217047,0,0.378212160335639,0.175951124163949,0.657587197282725,1.11218899690239,1.39300866608867,1.23469281844766,0.199034266818493,26.6841011179029,19.5584409407184,26.7113689431857,0.414251545071004,0.469052119962192,0.180062061461015,0,0.983821158737019,0.154267112887378,0.697601834251224,0.268273401399619,1.98501082024188,1.81015834904829,2.13417703302824,1.86458261955468,2.48539978623065,2.41505126820156,2.14730270016595,0.210289948564127,0.514523061896422,0.330418782983798,0.264450566663544,0.426576501070468,0.232236671860439,0.515469845288373,0.605050573870028,0.889512175379481,0.760902504450237,0.949058123089023,0.988193728344065,1.00534083520108,1.59165177632921,1.16978452271472,0,1.94524244887225,0.597423819763102,0.758671603812327,0.456994050438915,0,0,0.387904974335251,0.701358198903186,1.01178459398812,0.442830443938806,1.09899109488962,0.863780147452604,0,0.667380422864376,1.57247196090562,3.37293168577281,3.44862206360455,4.10001171579109,6.11102044275408,9.49397253587675,12.3222772349027,3.84385978463314,2.87536413054709,4.46569137202204,4.05648975048929,0.252578877947112,0.358794827043824,0.964887042726734,4.61882975416512,0.37898282354097,0.488894929326078,0.678980343100753,1.17345124144251,3.35012514883632,1.19021820443007,1.95133647857799,3.78324345854858,4.65075848262427,4.14582398509466,4.91589944147214,7.9435091658312,4.19482269886384,64.8402520938871,79.4102298375316,1.96705709207614,2.48343071674259,1.28440471990234,0.586058432961016,0,2.7771801992481,0.631016438832513,0.390438744296638,0.646270193198397,1.19484398976276,0.445597348164788,0.566153061577665,0.404810701674894,0.584511715822624,1.18586333383957,1.28528526568723,2.12910127812403,1.24645922567079,2.11753047159649,3.46437258242324,2.65490276679926,0.485561272309963,0.302323556964751,0,0.590603785761546,0.922305443831782,0.516856586336442,1.45413491791002,1.78248689192361,1.58018378967908,0,1.03135543248187,1.02131881726136,0.18006109403131,1.16422815404479,0.643011105094777,0.886701168211368,0.713475270408282,0.329098041204242,0.913394847343798,0.469343416127421,0.63549621259146,0.661585194164886,0.98931751764888,0.645857706783622,1.02531972377865,0.716234064018819,0.328281799490123,2.04036585640896,0.927126510052548,13.3279287022325,4.12773735926445,6.11141940320049,13.5625289043378,16.129918871081,19.2173665493479,11.3885548095883,15.3946597556024,10.2267980615274,0.954670618015114,0.474503990371703,0,0.432021363287205,1.88179466413022,0.218362563746178,0.944050424693745,1.98368293740806,1.30877970992015,1.55537967950151,4.97071450469541,0,0.897099276263873,0.330916980914195,1.36115831840833,0.774958940866387,1.18269287843545,1.17357238645754,0.2604087696879,0.314578033277133,0.483168241652012,0.288030006257865,135.25275962886,3.44632865993279,9.55211901632893,30.9211558687152,57.4675693092615,87.6184774585378,74.2807878033407,68.5279406090038,73.7055084621478,77.5023223681348,101.027837507114,104.474848153015,112.375431035905,143.174205172422,0.680191150845634,0,0,0,2.31827512838629,3.37828455812128,4.2124873581471,1.92931541171159,0.501572104035363,1.12950368523413,0.920650473014354,0,1.71853182343688,0.685082519770642,0,0,2.70192721934532,0.453142408984205,1.03552062350364,0.830298780673413,0,1.19513524027894,0.972426868273176,0.838452650511929,2.02227859295016,1.11123363900808,1.64828045791115,0.64183841918363,1.01078884705519,1.2673964994512,0.943131706930381,1.31098110457835,1.28050304809739,0.689225627467359,0.476293691283074,1.27472758539341,0.578727661391115,1.23625770240992,1.03039244094078,1.71434626192708,1.4198064492747,2.38436189947321,1.0174249164263,1.2234219453993,1.4384483341585,0.548783918618318,1.31534855718921,0.814824683075171,1.12228454331548,1.66089025373844,1.18205378850676,2.04615521584845,1.85924209423159,1.15743966588685,0.999242311751784,3.04111090979031,3.86767897286937,0.765153328275374,5.07360263974886,10.2021847672985 | |||
|short_description=p1@Arl5c | |||
}} |
Revision as of 21:46, 12 September 2013
Short description: | p1@Arl5c |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Arl5c_5end |
Coexpression cluster: | MCL_coexpression_mm9:118 |
Association with transcript: | 0bp_to_ENSMUST00000107563_5end |
EntrezGene: | Arl5c |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.74e-10 | 32 |
hematopoietic oligopotent progenitor cell | 1.74e-10 | 32 |
hematopoietic stem cell | 1.74e-10 | 32 |
hematopoietic multipotent progenitor cell | 1.74e-10 | 32 |
motile cell | 2.69e-08 | 54 |
hematopoietic lineage restricted progenitor cell | 4.53e-08 | 25 |
connective tissue cell | 3.33e-07 | 46 |
mesenchymal cell | 3.33e-07 | 46 |
common myeloid progenitor | 3.42e-07 | 19 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.