FFCP PHASE1:Mm9::chr14:119336961..119336994,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr14:119336961..119336994,-|id=chr14:119336961..119336994,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002563,3.95e-10,9;CL:0002251,3.95e-10,9;CL:0000223,1.01e-09,20;CL:0000239,2.11e-09,6;CL:0000677,2.11e-09,6;CL:0000584,2.11e-09,6;CL:0000066,4.35e-08,25;CL:0000075,7.13e-08,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003929!4.45e-12!55;UBERON:0000490!3.59e-10!66;UBERON:0005911!5.39e-09!69;UBERON:0000949!1.55e-08!72;UBERON:0004921!2.32e-08!126;UBERON:0004185!2.32e-08!126;UBERON:0004119!2.75e-08!130;UBERON:0000925!2.75e-08!130;UBERON:0006595!2.75e-08!130;UBERON:0001007!3.94e-08!128;UBERON:0001555!3.94e-08!128;UBERON:0007026!3.94e-08!128;UBERON:0005057!1.37e-07!51;UBERON:0002370!2.58e-07!23;UBERON:0000974!2.58e-07!23;UBERON:0004807!2.58e-07!23;UBERON:0005058!2.58e-07!23;UBERON:0003351!2.58e-07!23;UBERON:0009113!2.58e-07!23;UBERON:0003295!2.58e-07!23;UBERON:0009722!2.58e-07!23;UBERON:0005562!2.58e-07!23;UBERON:0007690!2.58e-07!23;UBERON:0001041!3.67e-07!92;UBERON:0006562!7.15e-07!24;UBERON:0001557!7.15e-07!24;UBERON:0001042!7.15e-07!24;UBERON:0008814!7.15e-07!24;UBERON:0009145!7.15e-07!24;UBERON:0004177!7.47e-07!29;UBERON:0001242!7.90e-07!13;UBERON:0000060!7.90e-07!13;UBERON:0001262!7.90e-07!13;UBERON:0004786!7.90e-07!13;UBERON:0000077!9.58e-07!97|ontology_enrichment_uberon_v019_2=UBERON:0003929,1.86e-16,55;UBERON:0000490,5.09e-14,66;UBERON:0000949,2.47e-13,72;UBERON:0002370,1.64e-11,23;UBERON:0000974,1.64e-11,23;UBERON:0004807,1.64e-11,23;UBERON:0005058,1.64e-11,23;UBERON:0003351,1.64e-11,23;UBERON:0009113,1.64e-11,23;UBERON:0003295,1.64e-11,23;UBERON:0009722,1.64e-11,23;UBERON:0005562,1.64e-11,23;UBERON:0007690,1.64e-11,23;UBERON:0001242,3.17e-11,13;UBERON:0001262,3.17e-11,13;UBERON:0004786,3.17e-11,13;UBERON:0005911,3.26e-11,69;UBERON:0006562,7.73e-11,24;UBERON:0003408,7.73e-11,24;UBERON:0001557,7.73e-11,24;UBERON:0001042,7.73e-11,24;UBERON:0008814,7.73e-11,24;UBERON:0009145,7.73e-11,24;UBERON:0004177,2.85e-10,29;UBERON:0005057,2.85e-10,29;UBERON:0003350,3.95e-10,9;UBERON:0004808,3.95e-10,9;UBERON:0001277,3.95e-10,9;UBERON:0000077,8.15e-10,35;UBERON:0000344,2.53e-09,15;UBERON:0001264,3.49e-09,12;UBERON:0000072,3.97e-09,27;UBERON:0000485,6.51e-08,11;UBERON:0004923,1.58e-07,24;UBERON:0007811,1.85e-07,36;UBERON:0002368,2.90e-07,60;UBERON:0002075,6.94e-07,19;UBERON:0004921,7.62e-07,114;UBERON:0004119,8.06e-07,118;UBERON:0000925,8.06e-07,118;UBERON:0006595,8.06e-07,118|phase1_expression=0.160148847104794,5.93258192986914,3.18499467572675,10.8887116070459,10.5188103288733,2.85394762250213,2.56973904655078,0.774739940649458,2.53419699873,1.63845168425395,1.54096171402954,0.398860794976682,1.36960583944965,1.74840804837995,0.333109761815663,0,0,0.157731082679119,1.23402990245165,0.84877930359606,0.510259740906419,0.397163804803541,0.522399578277871,0.319984845586813,0.22940928106717,1.14846392823004,0.86152399231815,0.215471232685889,0.380046838912748,1.00812051903972,1.33038306393183,6.98533740805594,0.61506478758457,0,1.73310971850765,0.498703936075477,3.67504841272264,1.25559489221072,0,1.0470474879476,1.76469446409304,0.683045484958446,0.485510353031154,0.503587271902309,0.202753862439029,0.183546752161682,0,0.218025156380447,0,0.388859798148567,0.55994568650145,0,1.51004345451963,1.45072428402269,0.672187598284928,0,0.286533439938757,0.515672092277442,0,0.528990979272033,0.633831403506179,0.338844532069132,0,0.449949858640699,0,0,0,0,0.311068836925433,0.135005938331691,0.210324961351382,0,0.441737081903227,0.244981598429908,0.191690942036473,0,0,0.383062014255563,0.46081959976873,0.131886287730194,0.182975287204819,0,0.837548997004143,1.12552522006336,0.30559649555362,0,0.427115042397309,0.559198337475902,0,0.151143120213571,1.73918693221007,1.72084775396277,2.03991400112325,2.15881276655127,0,2.24013443548668,0.280888840263504,0.511290967734173,0.519572009205738,0,0.563373679106722,0,2.54805239706646,0,0,0,0.505524445014783,0.5709193985953,1.8125651855302,0,0.173485326766136,0,0,0.150722640552623,0,0,0.988779870937496,0.578397427679647,0,0,0.220841518460394,0,0,0.878342391034642,0.83778682725382,0.255457055208591,0,0.599902730993408,0.127070227073065,0.748953197024114,0.457500602818626,0,0.695297280769106,0.767146371990992,1.0389402227978,1.29793010454206,0,0.373220911830279,0.505445516867349,0.420883711772948,0.650602214813519,1.37941262660084,0.360124259610698,0.30140963567143,0.0680364991513279,0.384341160854549,0.655912071918102,1.03481348295606,0,0.378212160335639,0.527853372491847,0,0.834141747676794,0.348252166522167,1.02891068203972,0.199034266818493,0,0.257347907114715,0.568326998791185,0,0,0.540186184383045,0,0.393528463494808,0,0.232533944750408,0.804820204198858,0,0,0.164167464079095,0,0.146199987425332,0,0,0.630869845692382,0.102904612379284,1.65209391491899,1.32225283331772,0,0.696710015581316,0.515469845288373,0.201683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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr14:119336961..119336994,- | |||
|id=chr14:119336961..119336994,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,3.95e-10,9;CL:0002251,3.95e-10,9;CL:0000223,1.01e-09,20;CL:0000239,2.11e-09,6;CL:0000677,2.11e-09,6;CL:0000584,2.11e-09,6;CL:0000066,4.35e-08,25;CL:0000075,7.13e-08,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003929!4.45e-12!55;UBERON:0000490!3.59e-10!66;UBERON:0005911!5.39e-09!69;UBERON:0000949!1.55e-08!72;UBERON:0004921!2.32e-08!126;UBERON:0004185!2.32e-08!126;UBERON:0004119!2.75e-08!130;UBERON:0000925!2.75e-08!130;UBERON:0006595!2.75e-08!130;UBERON:0001007!3.94e-08!128;UBERON:0001555!3.94e-08!128;UBERON:0007026!3.94e-08!128;UBERON:0005057!1.37e-07!51;UBERON:0002370!2.58e-07!23;UBERON:0000974!2.58e-07!23;UBERON:0004807!2.58e-07!23;UBERON:0005058!2.58e-07!23;UBERON:0003351!2.58e-07!23;UBERON:0009113!2.58e-07!23;UBERON:0003295!2.58e-07!23;UBERON:0009722!2.58e-07!23;UBERON:0005562!2.58e-07!23;UBERON:0007690!2.58e-07!23;UBERON:0001041!3.67e-07!92;UBERON:0006562!7.15e-07!24;UBERON:0001557!7.15e-07!24;UBERON:0001042!7.15e-07!24;UBERON:0008814!7.15e-07!24;UBERON:0009145!7.15e-07!24;UBERON:0004177!7.47e-07!29;UBERON:0001242!7.90e-07!13;UBERON:0000060!7.90e-07!13;UBERON:0001262!7.90e-07!13;UBERON:0004786!7.90e-07!13;UBERON:0000077!9.58e-07!97 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003929,1.86e-16,55;UBERON:0000490,5.09e-14,66;UBERON:0000949,2.47e-13,72;UBERON:0002370,1.64e-11,23;UBERON:0000974,1.64e-11,23;UBERON:0004807,1.64e-11,23;UBERON:0005058,1.64e-11,23;UBERON:0003351,1.64e-11,23;UBERON:0009113,1.64e-11,23;UBERON:0003295,1.64e-11,23;UBERON:0009722,1.64e-11,23;UBERON:0005562,1.64e-11,23;UBERON:0007690,1.64e-11,23;UBERON:0001242,3.17e-11,13;UBERON:0001262,3.17e-11,13;UBERON:0004786,3.17e-11,13;UBERON:0005911,3.26e-11,69;UBERON:0006562,7.73e-11,24;UBERON:0003408,7.73e-11,24;UBERON:0001557,7.73e-11,24;UBERON:0001042,7.73e-11,24;UBERON:0008814,7.73e-11,24;UBERON:0009145,7.73e-11,24;UBERON:0004177,2.85e-10,29;UBERON:0005057,2.85e-10,29;UBERON:0003350,3.95e-10,9;UBERON:0004808,3.95e-10,9;UBERON:0001277,3.95e-10,9;UBERON:0000077,8.15e-10,35;UBERON:0000344,2.53e-09,15;UBERON:0001264,3.49e-09,12;UBERON:0000072,3.97e-09,27;UBERON:0000485,6.51e-08,11;UBERON:0004923,1.58e-07,24;UBERON:0007811,1.85e-07,36;UBERON:0002368,2.90e-07,60;UBERON:0002075,6.94e-07,19;UBERON:0004921,7.62e-07,114;UBERON:0004119,8.06e-07,118;UBERON:0000925,8.06e-07,118;UBERON:0006595,8.06e-07,118 | |||
|phase1_expression=0.160148847104794,5.93258192986914,3.18499467572675,10.8887116070459,10.5188103288733,2.85394762250213,2.56973904655078,0.774739940649458,2.53419699873,1.63845168425395,1.54096171402954,0.398860794976682,1.36960583944965,1.74840804837995,0.333109761815663,0,0,0.157731082679119,1.23402990245165,0.84877930359606,0.510259740906419,0.397163804803541,0.522399578277871,0.319984845586813,0.22940928106717,1.14846392823004,0.86152399231815,0.215471232685889,0.380046838912748,1.00812051903972,1.33038306393183,6.98533740805594,0.61506478758457,0,1.73310971850765,0.498703936075477,3.67504841272264,1.25559489221072,0,1.0470474879476,1.76469446409304,0.683045484958446,0.485510353031154,0.503587271902309,0.202753862439029,0.183546752161682,0,0.218025156380447,0,0.388859798148567,0.55994568650145,0,1.51004345451963,1.45072428402269,0.672187598284928,0,0.286533439938757,0.515672092277442,0,0.528990979272033,0.633831403506179,0.338844532069132,0,0.449949858640699,0,0,0,0,0.311068836925433,0.135005938331691,0.210324961351382,0,0.441737081903227,0.244981598429908,0.191690942036473,0,0,0.383062014255563,0.46081959976873,0.131886287730194,0.182975287204819,0,0.837548997004143,1.12552522006336,0.30559649555362,0,0.427115042397309,0.559198337475902,0,0.151143120213571,1.73918693221007,1.72084775396277,2.03991400112325,2.15881276655127,0,2.24013443548668,0.280888840263504,0.511290967734173,0.519572009205738,0,0.563373679106722,0,2.54805239706646,0,0,0,0.505524445014783,0.5709193985953,1.8125651855302,0,0.173485326766136,0,0,0.150722640552623,0,0,0.988779870937496,0.578397427679647,0,0,0.220841518460394,0,0,0.878342391034642,0.83778682725382,0.255457055208591,0,0.599902730993408,0.127070227073065,0.748953197024114,0.457500602818626,0,0.695297280769106,0.767146371990992,1.0389402227978,1.29793010454206,0,0.373220911830279,0.505445516867349,0.420883711772948,0.650602214813519,1.37941262660084,0.360124259610698,0.30140963567143,0.0680364991513279,0.384341160854549,0.655912071918102,1.03481348295606,0,0.378212160335639,0.527853372491847,0,0.834141747676794,0.348252166522167,1.02891068203972,0.199034266818493,0,0.257347907114715,0.568326998791185,0,0,0.540186184383045,0,0.393528463494808,0,0.232533944750408,0.804820204198858,0,0,0.164167464079095,0,0.146199987425332,0,0,0.630869845692382,0.102904612379284,1.65209391491899,1.32225283331772,0,0.696710015581316,0.515469845288373,0.201683524623343,0.444756087689741,0,0.474529061544512,0.164698954724011,0.251335208800269,0,0,0,0.432276099749388,0.796565093017469,0.189667900953082,0.228497025219458,0,1.01825663922657,0.581857461502877,0.140271639780637,0.316182685621286,0.442830443938806,0.31399745568275,0,2.07516838961004,0.500535317148282,0.393117990226406,0.224862112384854,0.608580364165509,0,0.25462585178142,0.575392274901621,0.486405680325106,1.37280706594041,0,0.372140947668503,0.624075346229121,0.505157755894224,0.896987067609561,0.482443521363367,0.184753190166605,0.757965647081939,0.162964976442026,0.339490171550376,0.234690248288502,0.335012514883631,0.476087281772027,0.195133647857799,0.157635144106191,0.221464689648775,0.159454768657487,0.327726629431476,0.345369963731791,0.433947175744535,0,0,0.983528546038072,0,0.481651769963376,0.937693492737625,0,0.252470927204373,0.315508219416257,0.780877488593277,0.430846795465598,0,0,0,0.809621403349789,0,0,1.60660658210904,0.99358059645788,0.178065603667255,0,0.329940245945071,2.65490276679926,0.971122544619926,2.72091201268276,7.73280826999182,6.20133975049623,5.22639751504677,0.775284879504663,3.27180356529755,3.56497378384721,2.52829406348653,5.27093042874994,0,1.36175842301515,0.36012218806262,0.646793418913773,1.28602221018955,0.354680467284547,0.356737635204141,0.822745103010605,0,0.23467170806371,1.27099242518292,0.882113592219848,0.16488625294148,0,0.120625849856312,0,0.984845398470368,0.291480836629851,1.29797711407357,1.02522528478712,1.03193433981611,0.555583582109135,0.565105371014073,0.27338845544205,0,0.169978429993855,0.69975726161829,0,0,0.316335993581135,1.42323626988794,0.108005340821801,0.418176592028937,0.436725127492355,0.674321731924103,0.247960367176008,0.523511883968059,0.388844919875379,0,0.56369293868419,0.299033092087958,0,0.388902376688095,0.258319646955462,0.844780627453891,0.352071715937262,0.39061315453185,0.629156066554265,1.20792060413003,1.44015003128933,4.4241556887945,0.608175645870493,0.513554785824136,0.51968329191118,0.716106782669926,1.19208812868759,1.56254084375959,1.62458479892035,3.23092639834072,2.209997392995,2.21817607301049,3.02119430293232,4.42574471545516,3.85693777199178,0.226730383615211,0.221985953374065,0.179427713218951,0.167884616364078,0,0.563047426353546,0.915758121336325,0,0,0,0.920650473014354,1.71868654031819,0.68741272937475,0,0.755393897389701,0.675022500231806,0.900642406448441,0.453142408984205,1.03552062350364,0.31136204275253,0,0.341467211508268,0,0,0.183843508450014,0.44449345560323,0,0.320919209591815,0.505394423527595,0.760437899670719,0.75450536554430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| |||
|short_description=p@chr14:119336961..119336994,- | |||
}} |
Revision as of 01:32, 13 September 2013
Short description: | p@chr14:119336961..119336994, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:119336961..119336994, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 3.95e-10 | 9 |
epithelial cell of alimentary canal | 3.95e-10 | 9 |
endodermal cell | 1.01e-09 | 20 |
brush border epithelial cell | 2.11e-09 | 6 |
gut absorptive cell | 2.11e-09 | 6 |
enterocyte | 2.11e-09 | 6 |
epithelial cell | 4.35e-08 | 25 |
columnar/cuboidal epithelial cell | 7.13e-08 | 7 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.