FFCP PHASE1:Hg19::chr3:98591021..98591026,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=|TSSclassifier=N|UniProt=|association_with_transcript=0bp_to_ENST00000487339_5end|description=CAGE_peak_1_at_ENST00000487339_5end|id=chr3:98591021..98591026,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002188;4.12e-28;5!CL:1000746;3.59e-20;7!CL:1000612;3.59e-20;7!CL:0002564;1.68e-12;3!CL:0002681;7.27e-12;12!CL:0002584;7.27e-12;12!CL:1000449;1.58e-09;15!CL:1000497;2.01e-08;17!CL:0002518;2.01e-08;17|ontology_enrichment_celltype_v019_2=CL:0002188,3.85e-28,5;CL:1000746,3.42e-20,7;CL:1000612,3.42e-20,7;CL:0002564,2.00e-12,3;CL:0002681,7.07e-12,12;CL:0002584,7.07e-12,12;CL:1000449,1.55e-09,15;CL:1000497,1.97e-08,17;CL:0002518,1.97e-08,17|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:162!6.93e-09!235;DOID:14566!2.73e-08!239;DOID:305!7.04e-08!106;DOID:0050687!1.24e-07!143|ontology_enrichment_disease_v019=DOID:630;1.65e-10;1!DOID:0050177;1.65e-10;1!DOID:0050427;1.65e-10;1!DOID:0060060;3.39e-10;1!DOID:0060061;3.39e-10;1!DOID:8691;3.39e-10;1|ontology_enrichment_disease_v019_2=DOID:630,1.65e-10,1;DOID:0050177,1.65e-10,1;DOID:0050427,1.65e-10,1;DOID:0060060,2.84e-10,1;DOID:0060061,2.84e-10,1;DOID:8691,2.84e-10,1|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0000074;3.59e-20;7!UBERON:0001229;3.59e-20;7!UBERON:0011135;2.27e-16;5!UBERON:0002216;2.27e-16;5!UBERON:0011134;2.27e-16;5!UBERON:0002209;2.27e-16;5!UBERON:0002213;2.27e-16;5!UBERON:0007844;2.27e-16;5!UBERON:0011138;2.27e-16;5!UBERON:0001130;2.27e-16;5!UBERON:0001066;2.27e-16;5!UBERON:0001468;2.27e-16;5!UBERON:0002242;1.68e-12;3!UBERON:0001225;7.27e-12;12!UBERON:0008987;7.27e-12;12!UBERON:0004905;1.93e-10;8!UBERON:0000982;1.93e-10;8!UBERON:0004770;1.93e-10;8!UBERON:0007195;2.26e-10;1!UBERON:0002146;8.24e-10;1!UBERON:0005623;8.24e-10;1!UBERON:0001851;1.58e-09;15!UBERON:0006555;1.58e-09;15!UBERON:0000353;1.58e-09;15!UBERON:0004819;1.58e-09;15!UBERON:0001285;1.58e-09;15!UBERON:0007684;1.58e-09;15!UBERON:0004765;2.53e-08;26|ontology_enrichment_uberon_v019_2=UBERON:0010532,3.42e-20,7;UBERON:0000074,3.42e-20,7;UBERON:0001229,3.42e-20,7;UBERON:0001230,3.42e-20,7;UBERON:0003220,3.42e-20,7;UBERON:0005749,3.42e-20,7;UBERON:0004199,3.42e-20,7;UBERON:0004209,3.42e-20,7;UBERON:0004198,3.42e-20,7;UBERON:0005103,1.06e-17,8;UBERON:0000083,1.06e-17,8;UBERON:0009201,1.06e-17,8;UBERON:0006553,1.06e-17,8;UBERON:0003074,1.06e-17,8;UBERON:0003060,1.06e-17,8;UBERON:0011135,2.46e-16,5;UBERON:0002216,2.46e-16,5;UBERON:0011134,2.46e-16,5;UBERON:0002209,2.46e-16,5;UBERON:0002213,2.46e-16,5;UBERON:0005856,2.46e-16,5;UBERON:0005866,2.46e-16,5;UBERON:0005863,2.46e-16,5;UBERON:0007844,2.46e-16,5;UBERON:0011138,2.46e-16,5;UBERON:0001130,2.46e-16,5;UBERON:0001066,2.46e-16,5;UBERON:0001468,2.46e-16,5;UBERON:0000080,9.18e-16,9;UBERON:0002120,9.18e-16,9;UBERON:0004875,9.18e-16,9;UBERON:0005721,9.18e-16,9;UBERON:0005754,9.18e-16,9;UBERON:0007297,9.18e-16,9;UBERON:0004876,6.14e-13,11;UBERON:0002242,2.00e-12,3;UBERON:0003068,2.00e-12,3;UBERON:0002328,2.00e-12,3;UBERON:0004880,2.00e-12,3;UBERON:0001225,7.07e-12,12;UBERON:0008987,7.07e-12,12;UBERON:0003887,7.07e-12,12;UBERON:0004905,2.03e-10,8;UBERON:0000982,2.03e-10,8;UBERON:0004770,2.03e-10,8;UBERON:0007195,2.59e-10,1;UBERON:0002146,6.33e-10,1;UBERON:0005623,6.33e-10,1;UBERON:0001851,1.55e-09,15;UBERON:0004211,1.55e-09,15;UBERON:0009773,1.55e-09,15;UBERON:0000353,1.55e-09,15;UBERON:0001231,1.55e-09,15;UBERON:0001285,1.55e-09,15;UBERON:0007684,1.55e-09,15;UBERON:0004208,1.55e-09,15;UBERON:0006555,5.98e-09,16;UBERON:0004819,5.98e-09,16;UBERON:0000058,1.48e-07,19|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,1.39560233594486,0,0,0.74259811776028,4.63956326019082,0,0,0,0,0,0,0.313454721478088,0,0.136874425072884,0,0,0,0.0787107813136792,0,0,0,0,0,0,0.0774672005803016,0,0,0,0.601633342410425,0.434021741431704,0,0,0,0,0,0.242584061187816,0.232429036905685,0,0,0.28769239232215,0.256160706529101,0.945928919554341,0,0,0,0,0.272906150057846,0,0.306083892370903,0,0,0,0,0,0.290209238628584,0.56738522469114,0,0.502497330513487,0,0.217188844705117,0,1.84138817993782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0.382273228125229,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0.260118695119756,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0.267440195783507,0,0,0,0.12786256184353,0,0,0,0,0,0,0.221729397462564,0.087834785693126,0,0,0,0,0,0.132957960518865,0,0,0,0,3.4409383804245,0,0,0.419499436209906,0.275118041940067,0,0,0,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0,0.397227542439656,1.14734648299525,0.709336764396714,0,0,0,0,0.404132016209064,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0,0.421352420106746,0,0,0.103325781175765,0,0.494533858557114,0,0,0,0,0,0,0,0.45071417671979,0,0.179389635688862,0,0,0.600182192168805,0,0,0,0.337552664482532,0,0.504867548488229,0,0,0,0,0.169560592310488,0.3865217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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000487339_5end | |||
|description=CAGE_peak_1_at_ENST00000487339_5end | |||
|id=chr3:98591021..98591026,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002188;4.12e-28;5!CL:1000746;3.59e-20;7!CL:1000612;3.59e-20;7!CL:0002564;1.68e-12;3!CL:0002681;7.27e-12;12!CL:0002584;7.27e-12;12!CL:1000449;1.58e-09;15!CL:1000497;2.01e-08;17!CL:0002518;2.01e-08;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0002188,3.85e-28,5;CL:1000746,3.42e-20,7;CL:1000612,3.42e-20,7;CL:0002564,2.00e-12,3;CL:0002681,7.07e-12,12;CL:0002584,7.07e-12,12;CL:1000449,1.55e-09,15;CL:1000497,1.97e-08,17;CL:0002518,1.97e-08,17 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!6.93e-09!235;DOID:14566!2.73e-08!239;DOID:305!7.04e-08!106;DOID:0050687!1.24e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:630;1.65e-10;1!DOID:0050177;1.65e-10;1!DOID:0050427;1.65e-10;1!DOID:0060060;3.39e-10;1!DOID:0060061;3.39e-10;1!DOID:8691;3.39e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,1.65e-10,1;DOID:0050177,1.65e-10,1;DOID:0050427,1.65e-10,1;DOID:0060060,2.84e-10,1;DOID:0060061,2.84e-10,1;DOID:8691,2.84e-10,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000074;3.59e-20;7!UBERON:0001229;3.59e-20;7!UBERON:0011135;2.27e-16;5!UBERON:0002216;2.27e-16;5!UBERON:0011134;2.27e-16;5!UBERON:0002209;2.27e-16;5!UBERON:0002213;2.27e-16;5!UBERON:0007844;2.27e-16;5!UBERON:0011138;2.27e-16;5!UBERON:0001130;2.27e-16;5!UBERON:0001066;2.27e-16;5!UBERON:0001468;2.27e-16;5!UBERON:0002242;1.68e-12;3!UBERON:0001225;7.27e-12;12!UBERON:0008987;7.27e-12;12!UBERON:0004905;1.93e-10;8!UBERON:0000982;1.93e-10;8!UBERON:0004770;1.93e-10;8!UBERON:0007195;2.26e-10;1!UBERON:0002146;8.24e-10;1!UBERON:0005623;8.24e-10;1!UBERON:0001851;1.58e-09;15!UBERON:0006555;1.58e-09;15!UBERON:0000353;1.58e-09;15!UBERON:0004819;1.58e-09;15!UBERON:0001285;1.58e-09;15!UBERON:0007684;1.58e-09;15!UBERON:0004765;2.53e-08;26 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010532,3.42e-20,7;UBERON:0000074,3.42e-20,7;UBERON:0001229,3.42e-20,7;UBERON:0001230,3.42e-20,7;UBERON:0003220,3.42e-20,7;UBERON:0005749,3.42e-20,7;UBERON:0004199,3.42e-20,7;UBERON:0004209,3.42e-20,7;UBERON:0004198,3.42e-20,7;UBERON:0005103,1.06e-17,8;UBERON:0000083,1.06e-17,8;UBERON:0009201,1.06e-17,8;UBERON:0006553,1.06e-17,8;UBERON:0003074,1.06e-17,8;UBERON:0003060,1.06e-17,8;UBERON:0011135,2.46e-16,5;UBERON:0002216,2.46e-16,5;UBERON:0011134,2.46e-16,5;UBERON:0002209,2.46e-16,5;UBERON:0002213,2.46e-16,5;UBERON:0005856,2.46e-16,5;UBERON:0005866,2.46e-16,5;UBERON:0005863,2.46e-16,5;UBERON:0007844,2.46e-16,5;UBERON:0011138,2.46e-16,5;UBERON:0001130,2.46e-16,5;UBERON:0001066,2.46e-16,5;UBERON:0001468,2.46e-16,5;UBERON:0000080,9.18e-16,9;UBERON:0002120,9.18e-16,9;UBERON:0004875,9.18e-16,9;UBERON:0005721,9.18e-16,9;UBERON:0005754,9.18e-16,9;UBERON:0007297,9.18e-16,9;UBERON:0004876,6.14e-13,11;UBERON:0002242,2.00e-12,3;UBERON:0003068,2.00e-12,3;UBERON:0002328,2.00e-12,3;UBERON:0004880,2.00e-12,3;UBERON:0001225,7.07e-12,12;UBERON:0008987,7.07e-12,12;UBERON:0003887,7.07e-12,12;UBERON:0004905,2.03e-10,8;UBERON:0000982,2.03e-10,8;UBERON:0004770,2.03e-10,8;UBERON:0007195,2.59e-10,1;UBERON:0002146,6.33e-10,1;UBERON:0005623,6.33e-10,1;UBERON:0001851,1.55e-09,15;UBERON:0004211,1.55e-09,15;UBERON:0009773,1.55e-09,15;UBERON:0000353,1.55e-09,15;UBERON:0001231,1.55e-09,15;UBERON:0001285,1.55e-09,15;UBERON:0007684,1.55e-09,15;UBERON:0004208,1.55e-09,15;UBERON:0006555,5.98e-09,16;UBERON:0004819,5.98e-09,16;UBERON:0000058,1.48e-07,19 | |||
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|short_description=p1@ENST00000487339 | |||
}} |
Revision as of 01:40, 13 September 2013
Short description: | p1@ENST00000487339 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENST00000487339_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000487339_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glomerular endothelial cell | 3.85e-28 | 5 |
glomerular cell | 3.42e-20 | 7 |
kidney corpuscule cell | 3.42e-20 | 7 |
nucleus pulposus cell of intervertebral disc | 2.00e-12 | 3 |
kidney cortical cell | 7.07e-12 | 12 |
renal cortical epithelial cell | 7.07e-12 | 12 |
epithelial cell of nephron | 1.55e-09 | 15 |
kidney cell | 1.97e-08 | 17 |
kidney epithelial cell | 1.97e-08 | 17 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 1.65e-10 | 1 |
monogenic disease | 1.65e-10 | 1 |
xeroderma pigmentosum | 1.65e-10 | 1 |
non-Hodgkin lymphoma | 2.84e-10 | 1 |
cutaneous T cell lymphoma | 2.84e-10 | 1 |
mycosis fungoides | 2.84e-10 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.