FFCP PHASE1:Hg19::chr4:146101332..146101350,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=54726|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=24949|TSSclassifier=S|UniProt=G3V0I6|association_with_transcript=-19bp_to_ENST00000447906_5end|coexpression_cluster_id=C0|description=CAGE_peak_5_at_OTUD4_5end|id=chr4:146101332..146101350,-|ontology_enrichment_celltype=CL:0000766!2.32e-20!76;CL:0000557!1.98e-19!71;CL:0002009!5.35e-18!65;CL:0000839!1.73e-17!70;CL:0002194!8.95e-17!63;CL:0000576!8.95e-17!63;CL:0000040!8.95e-17!63;CL:0000559!8.95e-17!63;CL:0000738!3.80e-16!140;CL:0002057!1.18e-15!42;CL:0000763!2.11e-15!112;CL:0000049!2.11e-15!112;CL:0000860!1.63e-14!45;CL:0000037!4.08e-14!172;CL:0000566!4.08e-14!172;CL:0002031!4.39e-14!124;CL:0000988!1.39e-13!182;CL:0002032!3.11e-13!165;CL:0000837!3.11e-13!165;CL:0002087!2.22e-12!119;CL:0000063!6.31e-08!578;CL:0000134!2.23e-07!358|ontology_enrichment_celltype_v019=CL:0000860;3.58e-24;33!CL:0002057;3.58e-24;33!CL:0000473;1.43e-23;39!CL:0000234;1.43e-23;39!CL:0000766;2.65e-16;69!CL:0000576;4.29e-14;48|ontology_enrichment_celltype_v019_2=CL:0000766,3.10e-35,72;CL:0000557,4.03e-33,67;CL:0002009,9.22e-31,61;CL:0000473,3.00e-30,48;CL:0000234,3.00e-30,48;CL:0000839,2.02e-29,66;CL:0002194,1.11e-27,59;CL:0000576,1.11e-27,59;CL:0000040,1.11e-27,59;CL:0000559,1.11e-27,59;CL:0000860,2.14e-26,42;CL:0002057,2.14e-26,42;CL:0000738,2.67e-25,136;CL:0000763,5.70e-25,108;CL:0000049,5.70e-25,108;CL:0000988,2.42e-22,177;CL:0002031,2.02e-21,120;CL:0000037,9.62e-21,168;CL:0002032,3.50e-19,161;CL:0000837,3.50e-19,161;CL:0002087,1.70e-17,115;CL:0000134,2.05e-12,354;CL:0002320,8.07e-12,361;CL:0000034,6.98e-10,441;CL:0000219,9.48e-10,386;CL:0000723,2.73e-09,433;CL:0000048,3.52e-09,427|ontology_enrichment_development_v019=CL:0002057;1.24e-19;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!3.68e-17!80;UBERON:0001474!3.05e-16!86;UBERON:0002390!5.86e-14!102;UBERON:0003061!5.86e-14!102;UBERON:0002193!5.98e-14!112;UBERON:0004765!2.60e-13!101;UBERON:0001434!2.60e-13!101;UBERON:0002405!1.41e-10!115|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.38e-31,76;UBERON:0001474,3.16e-30,82;UBERON:0002390,4.82e-28,98;UBERON:0003061,4.82e-28,98;UBERON:0002193,5.04e-27,108;UBERON:0002405,1.35e-26,93;UBERON:0004765,1.76e-26,90;UBERON:0001434,1.18e-22,100;UBERON:0002384,1.22e-11,371;UBERON:0002204,1.69e-10,167;UBERON:0003081,6.04e-10,203;UBERON:0000926,9.34e-07,315;UBERON:0004120,9.34e-07,315;UBERON:0006603,9.34e-07,315|phase1_expression=0.54503513781167,0,0.422863212287913,0,0,0,2.53299878168311,1.26343974685366,0.261185628199839,0,0.697801167972428,0,0,0.37129905888014,0,0,0,0,0,0,0.204000691244253,0,0.85870796139317,0.273748850145768,0.87879847716362,0.458480434487708,0.57470412614962,0.550975469195755,1.18009283054671,1.53531759238885,2.16742572642506,0,0,0.369754010166788,0.542270404062111,0.284338464974843,2.93600439334847,11.0799081706375,10.6288557159175,8.24641308720237,0.223915474239924,0,0.257575567634187,0.436194716338694,1.88937971844405,0.727752183563449,1.39457422143411,4.93401465626191,4.64559556342655,2.3015391385772,3.58624989140741,2.12834006899727,4.82643953031266,5.80936215225443,10.8341189275473,0.376484679085209,0.818718450173537,2.24723484445085,3.06083892370903,4.17207735198922,0.639337125799041,0.659702600373432,0.797854630486527,0.426224750532694,6.67481248845743,15.8867862913519,17.4390229718761,1.7587406567972,5.73631210262222,1.73751075764093,6.65939452896706,13.6262725315399,10.1267963981083,0,0.425208599930087,0.419317291016752,0.112328631146495,0,0.16072558669708,0.570025487482497,0.19891667719909,0.365328307529268,0,0,0,0,0,0,0,0,0.569212969109448,4.11066032559657,3.05818582500183,1.32171328579026,5.60508562981536,0.526768169550154,0.196709770113833,0,0.205601498999509,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,1.64225599384209,0.604820229674197,0.534880391567015,0.289648807765598,0,0,0.383587685530591,0,0,0.289693037921647,0.795285947051099,0.486634870302636,0.283604451492204,1.10864698731282,0.175669571386252,0.261958150995425,0.728590576585084,0,0.97364218096405,1.39303789839414,1.32957960518865,0.238490624305342,1.14398982156026,0.74291500265913,0.39752481473341,0,0.347140501607594,0,0.838998872419812,0.275118041940067,0.835979866147242,0.258416759169329,0.35576626268671,0.66944122552934,0,1.52054421143703,0.976248230192678,0,0,0.17859945656816,0.44905874525234,0.900891843866578,0,0.949265659568129,0.366403487860815,1.31780417436063,0,0,0,0.12663051166458,0,0,0,0,0,0.49333509683432,0,0.269421344139376,0.490385709340376,0,0,0,0.312160076830321,0.570471821544449,1.19558944441441,0.587172493218824,0.323745888736263,0.140450806702248,0.204154171254893,0.122834317311768,0.103325781175765,0,0.494533858557114,0,0,0,0.125118519871964,0.277064115484183,0,0,0.150238058906597,0.113432183160021,0,0.213557388818567,0.423863802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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=54726 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24949 | |||
|TSSclassifier=S | |||
|UniProt=G3V0I6 | |||
|association_with_transcript=-19bp_to_ENST00000447906_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_5_at_OTUD4_5end | |||
|id=chr4:146101332..146101350,- | |||
|ontology_enrichment_celltype=CL:0000766!2.32e-20!76;CL:0000557!1.98e-19!71;CL:0002009!5.35e-18!65;CL:0000839!1.73e-17!70;CL:0002194!8.95e-17!63;CL:0000576!8.95e-17!63;CL:0000040!8.95e-17!63;CL:0000559!8.95e-17!63;CL:0000738!3.80e-16!140;CL:0002057!1.18e-15!42;CL:0000763!2.11e-15!112;CL:0000049!2.11e-15!112;CL:0000860!1.63e-14!45;CL:0000037!4.08e-14!172;CL:0000566!4.08e-14!172;CL:0002031!4.39e-14!124;CL:0000988!1.39e-13!182;CL:0002032!3.11e-13!165;CL:0000837!3.11e-13!165;CL:0002087!2.22e-12!119;CL:0000063!6.31e-08!578;CL:0000134!2.23e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.58e-24;33!CL:0002057;3.58e-24;33!CL:0000473;1.43e-23;39!CL:0000234;1.43e-23;39!CL:0000766;2.65e-16;69!CL:0000576;4.29e-14;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,3.10e-35,72;CL:0000557,4.03e-33,67;CL:0002009,9.22e-31,61;CL:0000473,3.00e-30,48;CL:0000234,3.00e-30,48;CL:0000839,2.02e-29,66;CL:0002194,1.11e-27,59;CL:0000576,1.11e-27,59;CL:0000040,1.11e-27,59;CL:0000559,1.11e-27,59;CL:0000860,2.14e-26,42;CL:0002057,2.14e-26,42;CL:0000738,2.67e-25,136;CL:0000763,5.70e-25,108;CL:0000049,5.70e-25,108;CL:0000988,2.42e-22,177;CL:0002031,2.02e-21,120;CL:0000037,9.62e-21,168;CL:0002032,3.50e-19,161;CL:0000837,3.50e-19,161;CL:0002087,1.70e-17,115;CL:0000134,2.05e-12,354;CL:0002320,8.07e-12,361;CL:0000034,6.98e-10,441;CL:0000219,9.48e-10,386;CL:0000723,2.73e-09,433;CL:0000048,3.52e-09,427 | |||
|ontology_enrichment_development_v019=CL:0002057;1.24e-19;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.68e-17!80;UBERON:0001474!3.05e-16!86;UBERON:0002390!5.86e-14!102;UBERON:0003061!5.86e-14!102;UBERON:0002193!5.98e-14!112;UBERON:0004765!2.60e-13!101;UBERON:0001434!2.60e-13!101;UBERON:0002405!1.41e-10!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.38e-31,76;UBERON:0001474,3.16e-30,82;UBERON:0002390,4.82e-28,98;UBERON:0003061,4.82e-28,98;UBERON:0002193,5.04e-27,108;UBERON:0002405,1.35e-26,93;UBERON:0004765,1.76e-26,90;UBERON:0001434,1.18e-22,100;UBERON:0002384,1.22e-11,371;UBERON:0002204,1.69e-10,167;UBERON:0003081,6.04e-10,203;UBERON:0000926,9.34e-07,315;UBERON:0004120,9.34e-07,315;UBERON:0006603,9.34e-07,315 | |||
|phase1_expression=0.54503513781167,0,0.422863212287913,0,0,0,2.53299878168311,1.26343974685366,0.261185628199839,0,0.697801167972428,0,0,0.37129905888014,0,0,0,0,0,0,0.204000691244253,0,0.85870796139317,0.273748850145768,0.87879847716362,0.458480434487708,0.57470412614962,0.550975469195755,1.18009283054671,1.53531759238885,2.16742572642506,0,0,0.369754010166788,0.542270404062111,0.284338464974843,2.93600439334847,11.0799081706375,10.6288557159175,8.24641308720237,0.223915474239924,0,0.257575567634187,0.436194716338694,1.88937971844405,0.727752183563449,1.39457422143411,4.93401465626191,4.64559556342655,2.3015391385772,3.58624989140741,2.12834006899727,4.82643953031266,5.80936215225443,10.8341189275473,0.376484679085209,0.818718450173537,2.24723484445085,3.06083892370903,4.17207735198922,0.639337125799041,0.659702600373432,0.797854630486527,0.426224750532694,6.67481248845743,15.8867862913519,17.4390229718761,1.7587406567972,5.73631210262222,1.73751075764093,6.65939452896706,13.6262725315399,10.1267963981083,0,0.425208599930087,0.419317291016752,0.112328631146495,0,0.16072558669708,0.570025487482497,0.19891667719909,0.365328307529268,0,0,0,0,0,0,0,0,0.569212969109448,4.11066032559657,3.05818582500183,1.32171328579026,5.60508562981536,0.526768169550154,0.196709770113833,0,0.205601498999509,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,1.64225599384209,0.604820229674197,0.534880391567015,0.289648807765598,0,0,0.383587685530591,0,0,0.289693037921647,0.795285947051099,0.486634870302636,0.283604451492204,1.10864698731282,0.175669571386252,0.261958150995425,0.728590576585084,0,0.97364218096405,1.39303789839414,1.32957960518865,0.238490624305342,1.14398982156026,0.74291500265913,0.39752481473341,0,0.347140501607594,0,0.838998872419812,0.275118041940067,0.835979866147242,0.258416759169329,0.35576626268671,0.66944122552934,0,1.52054421143703,0.976248230192678,0,0,0.17859945656816,0.44905874525234,0.900891843866578,0,0.949265659568129,0.366403487860815,1.31780417436063,0,0,0,0.12663051166458,0,0,0,0,0,0.49333509683432,0,0.269421344139376,0.490385709340376,0,0,0,0.312160076830321,0.570471821544449,1.19558944441441,0.587172493218824,0.323745888736263,0.140450806702248,0.204154171254893,0.122834317311768,0.103325781175765,0,0.494533858557114,0,0,0,0.125118519871964,0.277064115484183,0,0,0.150238058906597,0.113432183160021,0,0.213557388818567,0.423863802319124,0,0.309157587715317,0,0,0.168776332241266,0.292311015483596,0,0.184099797284599,0.323292113637624,0,0.10075209822764,0.169560592310488,0.386521706326594,0.272746120590835,0.286804595389004,0.121973706129595,0.132529768321485,0,0,0,0,0,1.28648187638577,0,0,0.721879481669586,0.118306800039844,0.168584690078102,0.482022059766964,0.330881918197182,0.217879444092406,0.474541238222193,0.269662616320329,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.201057944823262,1.20364978706088,0,0,0,0.231860809950154,0.469634776943287,1.15493158208859,1.85194205030644,0.951270761172991,0,0,0.492434012174795,4.21207677250628,1.78357394746474,0,0.503946384596579,0.567100388969546,0.53735113621709,0.581267877027924,0,5.41929561685538,0.44024217006613,1.86595303986695,2.30591925467138,0.75745460055828,0.126995788584338,0,0,0,0.514137463516618,0.300343057843917,0,0.224262168690721,0,0.07333828582095,0.517086863031111,0,1.690605505112,0.26593811658487,0,0,0,0.266422179016099,0.285955987316295,0.542621605391443,0,0.65147236858747,0,0.791951872933429,0.301439377059586,0,0.399891964728228,1.2162378064119,1.00451418286425,0,0,0,0,0,0.410952645100767,0.895304816199478,0.224170287987055,0.591092280605782,1.2937654491571,1.15508732651774,0.76228387266739,0,0,0,0.637938751653163,0.749007023947182,0,1.65766205374414,0,0,0,0.623912584592421,0.178428988797162,0.157702415033935,0.117141414992713,0,0,0,0,0.553107505625109,0.173767228936166,0,0,0,0.647142602455851,1.17400313583789,0,0,0.30239029332968,0,0.460385919864187,0.561320188866147,0,0,0.160853921143607,0,1.23367755042124,1.24293207719189,0.739144404124282,1.03850885836724,0.581051892299796,0.120859449591622,0.40101294060657,0.184161977871793,0.114814448164607,1.63882051206045,0.262248829918848,0.451199612907412,1.30926073077505,0,0,0.316654886678627,0,0.170093705276516,0.215915916102139,1.54227252690289,0.270946437543853,0,0,0,0.671624264166535,0,0,0,0.656029291399411,0,0.309123034943167,0.183138929636687,0.247528499761764,0.574265537996172,0,0,0.290012154876366,0.462145851343933,0.460511024178389,1.37836572484531,0.107420244868274,0.145016693914229,1.10794615640931,0.623224249527161,0.165284915360978,0.960950336825531,1.65896526242959,0.50578890427775,0,0.31481234683064,0,0.616067160352178,0,0,0.55597265731176,0.858749320451947,0,0.949138274156178,0,0,0,0,0.78494864019923,0.359744915166629,0,0.117812402345686,0,0,0,0,0.974853958525138,0,0.136499911407986,0.141405431953713,0,0,0.66343897524122,0.438450885253763,0,0.655894752046633,0.405820753925408,0,0,0.286822704408103,0.0982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| |||
|short_description=p5@OTUD4 | |||
}} |
Revision as of 02:38, 13 September 2013
Short description: | p5@OTUD4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_OTUD4_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -19bp_to_ENST00000447906_5end |
EntrezGene: | OTUD4 |
HGNC: | 24949 |
UniProt: | G3V0I6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 3.10e-35 | 72 |
granulocyte monocyte progenitor cell | 4.03e-33 | 67 |
macrophage dendritic cell progenitor | 9.22e-31 | 61 |
defensive cell | 3.00e-30 | 48 |
phagocyte | 3.00e-30 | 48 |
myeloid lineage restricted progenitor cell | 2.02e-29 | 66 |
monopoietic cell | 1.11e-27 | 59 |
monocyte | 1.11e-27 | 59 |
monoblast | 1.11e-27 | 59 |
promonocyte | 1.11e-27 | 59 |
classical monocyte | 2.14e-26 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.14e-26 | 42 |
leukocyte | 2.67e-25 | 136 |
myeloid cell | 5.70e-25 | 108 |
common myeloid progenitor | 5.70e-25 | 108 |
hematopoietic cell | 2.42e-22 | 177 |
hematopoietic lineage restricted progenitor cell | 2.02e-21 | 120 |
hematopoietic stem cell | 9.62e-21 | 168 |
hematopoietic oligopotent progenitor cell | 3.50e-19 | 161 |
hematopoietic multipotent progenitor cell | 3.50e-19 | 161 |
nongranular leukocyte | 1.70e-17 | 115 |
mesenchymal cell | 2.05e-12 | 354 |
connective tissue cell | 8.07e-12 | 361 |
stem cell | 6.98e-10 | 441 |
motile cell | 9.48e-10 | 386 |
somatic stem cell | 2.73e-09 | 433 |
multi fate stem cell | 3.52e-09 | 427 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.38e-31 | 76 |
bone element | 3.16e-30 | 82 |
hematopoietic system | 4.82e-28 | 98 |
blood island | 4.82e-28 | 98 |
hemolymphoid system | 5.04e-27 | 108 |
immune system | 1.35e-26 | 93 |
skeletal element | 1.76e-26 | 90 |
skeletal system | 1.18e-22 | 100 |
connective tissue | 1.22e-11 | 371 |
musculoskeletal system | 1.69e-10 | 167 |
lateral plate mesoderm | 6.04e-10 | 203 |
mesoderm | 9.34e-07 | 315 |
mesoderm-derived structure | 9.34e-07 | 315 |
presumptive mesoderm | 9.34e-07 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.