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FFCP PHASE1:Mm9::chr15:78427542..78427551,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=72318|HGNC=|MCL_coexpression_id=316|UniProt=Q80YW0,Q05D35,Q571J1,Q3U0C0,Q3U6Y6,Q3U8A6|association_with_transcript=65bp_to_ENSMUST00000043069,ENSMUST00000109713,ENSMUST00000169640,NM_028195,uc007wpr.1,uc007wps.1,uc007wpt.1,uc007wpu.1,uc011zvu.1_5end|description=CAGE_peak_2_at_Cyth4_5end|id=chr15:78427542..78427551,+|ontology_enrichment_celltype=CL:0000988!2.38e-10!32;CL:0002032!2.38e-10!32;CL:0000037!2.38e-10!32;CL:0000566!2.38e-10!32;CL:0000837!2.38e-10!32;CL:0002031!8.93e-09!25;CL:0000738!2.02e-07!17;CL:0002087!2.02e-07!17|ontology_enrichment_celltype_v019_2=CL:0000988,1.52e-12,32;CL:0002032,1.52e-12,32;CL:0000037,1.52e-12,32;CL:0000837,1.52e-12,32;CL:0002031,3.09e-10,25;CL:0000738,1.57e-08,17;CL:0002087,1.57e-08,17;CL:0002320,3.51e-08,46;CL:0000134,3.51e-08,46;CL:0000049,5.49e-08,19|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!9.54e-18!48;UBERON:0002405!1.21e-16!70;UBERON:0002390!2.20e-16!45;UBERON:0003061!2.20e-16!45;UBERON:0002371!1.44e-09!16;UBERON:0000926!1.63e-09!193;UBERON:0004120!1.63e-09!193;UBERON:0006603!1.63e-09!193;UBERON:0003081!1.95e-09!88;UBERON:0001474!9.21e-09!22;UBERON:0004765!9.21e-09!22;UBERON:0001434!9.21e-09!22;UBERON:0004177!3.22e-08!29;UBERON:0005057!7.34e-08!51;UBERON:0001041!8.86e-08!92;UBERON:0000077!1.06e-07!97|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.55e-21,48;UBERON:0002405,1.55e-21,48;UBERON:0002390,7.01e-20,45;UBERON:0003061,7.01e-20,45;UBERON:0002371,8.71e-11,16;UBERON:0001474,8.96e-11,22;UBERON:0004765,8.96e-11,22;UBERON:0001434,8.96e-11,22;UBERON:0004177,2.89e-10,29;UBERON:0005057,2.89e-10,29;UBERON:0003081,4.04e-10,87;UBERON:0001041,1.94e-09,80;UBERON:0002204,3.62e-09,32;UBERON:0000077,4.52e-09,35;UBERON:0002384,3.51e-08,46;UBERON:0001004,2.63e-07,42;UBERON:0000926,3.79e-07,120;UBERON:0004120,3.79e-07,120;UBERON:0006603,3.79e-07,120;UBERON:0000065,4.28e-07,41;UBERON:0003408,4.39e-07,24;UBERON:0002370,7.04e-07,23;UBERON:0000974,7.04e-07,23;UBERON:0004807,7.04e-07,23;UBERON:0005058,7.04e-07,23;UBERON:0003351,7.04e-07,23;UBERON:0009113,7.04e-07,23;UBERON:0003295,7.04e-07,23;UBERON:0009722,7.04e-07,23;UBERON:0005562,7.04e-07,23;UBERON:0007690,7.04e-07,23;UBERON:0005911,8.15e-07,69|phase1_expression=0,0.348975407639361,0,0,0,0,0,15.4947988129892,2.956563165185,2.10658073689794,2.73948749160808,0.8774937489487,18.8320802924326,11.2772319120507,6.32908547449759,4.656931149966,0.699561878128147,18.2968055907778,18.6475629703805,20.7950929381035,1.19060606211498,6.7517846816602,7.31359409589019,2.71987118748791,3.44113921600755,0,0,0,0.570070258369122,0.252030129759931,0,0,1.84519436275371,0,0,0,0,31.3898723052681,21.8773896466664,24.6056159667685,29.4115744015507,38.250547157673,33.9857247121808,0,0,0,0.782391344348039,0,0,0,0.139986421625363,0,8.05356509077134,12.3311564141929,14.452033363126,0,0.286533439938757,1.03134418455488,0.404632921719196,0.528990979272033,0,0,0,42.7452365708665,43.5101199529469,41.9183267818199,11.3848041996994,6.91592949578798,0.103689612308478,0.135005938331691,0.841299845405528,0.856952953211411,0.441737081903227,0.122490799214954,0.191690942036473,0,0,0.638436690425939,0.307213066512487,0.395658863190582,0.365950574409639,0,0.279182999001381,0.56276261003168,0.61119299110724,0.589257170947335,0.711858403995515,0.559198337475902,0,0,0.289864488701678,0,0,0,0,0.448026887097336,1.96622188184453,0,0,0,0,0,0,0,0,0,0,1.25602267690966,27.9652914338945,2.3750742250372,0.346970653532272,0.913396434936424,0.461230994512117,1.05505848386836,0.823120949949934,0.628332956648377,0.494389935468748,1.87979163995885,7.96149496754887,2.75003644910596,3.3126227769059,7.27312879702833,0,0.585561594023094,0.628340120440365,1.78819938646014,3.83408398418945,3.59941638596045,3.30382590389968,0.599162557619291,1.37250180845588,0.251308704225729,1.04294592115366,0.255715457330331,0.41557608911912,0.811206315338788,0.81471491080253,5.59831367745419,1.26361379216837,0.841767423545896,0.780722657776222,0.229902104433473,0.360124259610698,0.452114453507145,0.748401490664606,0.384341160854549,0.562210347358373,0.258703370739016,0.215567992932842,0.567318240503458,1.05570674498369,0.657587197282725,0.834141747676794,0.696504333044333,1.85203922767149,0.59710280045548,11.2354109970118,6.17634977075316,4.26245249093389,0.414251545071004,0.938104239924385,0.540186184383045,0.710234206755631,0.590292695242212,0.154267112887378,0.465067889500816,0,0.350296027101508,0.822799249567402,1.31333971263276,1.13496333364198,0.438599962275997,3.73235195994786,1.47627060636409,0.630869845692382,0.514523061896422,2.31293148088659,1.05780226665418,0,0.696710015581316,0.644337306610467,0.201683524623343,0.444756087689741,0.570676878337677,0.949058123089023,0.658795818896044,0,0.198956472041151,0.974820435595601,0.898819408654221,0.864552199498777,1.1948476395262,0.569003702859245,0.799739588268102,1.1270773567308,0.610953983535943,0.387904974335251,0.841629838683823,0.379419222745544,0.590440591918409,1.098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|EntrezGene=72318
|HGNC=
|MCL_coexpression_id=316
|UniProt=Q80YW0,Q05D35,Q571J1,Q3U0C0,Q3U6Y6,Q3U8A6
|association_with_transcript=65bp_to_ENSMUST00000043069,ENSMUST00000109713,ENSMUST00000169640,NM_028195,uc007wpr.1,uc007wps.1,uc007wpt.1,uc007wpu.1,uc011zvu.1_5end
|description=CAGE_peak_2_at_Cyth4_5end
|id=chr15:78427542..78427551,+
|ontology_enrichment_celltype=CL:0000988!2.38e-10!32;CL:0002032!2.38e-10!32;CL:0000037!2.38e-10!32;CL:0000566!2.38e-10!32;CL:0000837!2.38e-10!32;CL:0002031!8.93e-09!25;CL:0000738!2.02e-07!17;CL:0002087!2.02e-07!17
|ontology_enrichment_celltype_v019_2=CL:0000988,1.52e-12,32;CL:0002032,1.52e-12,32;CL:0000037,1.52e-12,32;CL:0000837,1.52e-12,32;CL:0002031,3.09e-10,25;CL:0000738,1.57e-08,17;CL:0002087,1.57e-08,17;CL:0002320,3.51e-08,46;CL:0000134,3.51e-08,46;CL:0000049,5.49e-08,19
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002193!9.54e-18!48;UBERON:0002405!1.21e-16!70;UBERON:0002390!2.20e-16!45;UBERON:0003061!2.20e-16!45;UBERON:0002371!1.44e-09!16;UBERON:0000926!1.63e-09!193;UBERON:0004120!1.63e-09!193;UBERON:0006603!1.63e-09!193;UBERON:0003081!1.95e-09!88;UBERON:0001474!9.21e-09!22;UBERON:0004765!9.21e-09!22;UBERON:0001434!9.21e-09!22;UBERON:0004177!3.22e-08!29;UBERON:0005057!7.34e-08!51;UBERON:0001041!8.86e-08!92;UBERON:0000077!1.06e-07!97
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.55e-21,48;UBERON:0002405,1.55e-21,48;UBERON:0002390,7.01e-20,45;UBERON:0003061,7.01e-20,45;UBERON:0002371,8.71e-11,16;UBERON:0001474,8.96e-11,22;UBERON:0004765,8.96e-11,22;UBERON:0001434,8.96e-11,22;UBERON:0004177,2.89e-10,29;UBERON:0005057,2.89e-10,29;UBERON:0003081,4.04e-10,87;UBERON:0001041,1.94e-09,80;UBERON:0002204,3.62e-09,32;UBERON:0000077,4.52e-09,35;UBERON:0002384,3.51e-08,46;UBERON:0001004,2.63e-07,42;UBERON:0000926,3.79e-07,120;UBERON:0004120,3.79e-07,120;UBERON:0006603,3.79e-07,120;UBERON:0000065,4.28e-07,41;UBERON:0003408,4.39e-07,24;UBERON:0002370,7.04e-07,23;UBERON:0000974,7.04e-07,23;UBERON:0004807,7.04e-07,23;UBERON:0005058,7.04e-07,23;UBERON:0003351,7.04e-07,23;UBERON:0009113,7.04e-07,23;UBERON:0003295,7.04e-07,23;UBERON:0009722,7.04e-07,23;UBERON:0005562,7.04e-07,23;UBERON:0007690,7.04e-07,23;UBERON:0005911,8.15e-07,69
|phase1_expression=0,0.348975407639361,0,0,0,0,0,15.4947988129892,2.956563165185,2.10658073689794,2.73948749160808,0.8774937489487,18.8320802924326,11.2772319120507,6.32908547449759,4.656931149966,0.699561878128147,18.2968055907778,18.6475629703805,20.7950929381035,1.19060606211498,6.7517846816602,7.31359409589019,2.71987118748791,3.44113921600755,0,0,0,0.570070258369122,0.252030129759931,0,0,1.84519436275371,0,0,0,0,31.3898723052681,21.8773896466664,24.6056159667685,29.4115744015507,38.250547157673,33.9857247121808,0,0,0,0.782391344348039,0,0,0,0.139986421625363,0,8.05356509077134,12.3311564141929,14.452033363126,0,0.286533439938757,1.03134418455488,0.404632921719196,0.528990979272033,0,0,0,42.7452365708665,43.5101199529469,41.9183267818199,11.3848041996994,6.91592949578798,0.103689612308478,0.135005938331691,0.841299845405528,0.856952953211411,0.441737081903227,0.122490799214954,0.191690942036473,0,0,0.638436690425939,0.307213066512487,0.395658863190582,0.365950574409639,0,0.279182999001381,0.56276261003168,0.61119299110724,0.589257170947335,0.711858403995515,0.559198337475902,0,0,0.289864488701678,0,0,0,0,0.448026887097336,1.96622188184453,0,0,0,0,0,0,0,0,0,0,1.25602267690966,27.9652914338945,2.3750742250372,0.346970653532272,0.913396434936424,0.461230994512117,1.05505848386836,0.823120949949934,0.628332956648377,0.494389935468748,1.87979163995885,7.96149496754887,2.75003644910596,3.3126227769059,7.27312879702833,0,0.585561594023094,0.628340120440365,1.78819938646014,3.83408398418945,3.59941638596045,3.30382590389968,0.599162557619291,1.37250180845588,0.251308704225729,1.04294592115366,0.255715457330331,0.41557608911912,0.811206315338788,0.81471491080253,5.59831367745419,1.26361379216837,0.841767423545896,0.780722657776222,0.229902104433473,0.360124259610698,0.452114453507145,0.748401490664606,0.384341160854549,0.562210347358373,0.258703370739016,0.215567992932842,0.567318240503458,1.05570674498369,0.657587197282725,0.834141747676794,0.696504333044333,1.85203922767149,0.59710280045548,11.2354109970118,6.17634977075316,4.26245249093389,0.414251545071004,0.938104239924385,0.540186184383045,0.710234206755631,0.590292695242212,0.154267112887378,0.465067889500816,0,0.350296027101508,0.822799249567402,1.31333971263276,1.13496333364198,0.438599962275997,3.73235195994786,1.47627060636409,0.630869845692382,0.514523061896422,2.31293148088659,1.05780226665418,0,0.696710015581316,0.644337306610467,0.201683524623343,0.444756087689741,0.570676878337677,0.949058123089023,0.658795818896044,0,0.198956472041151,0.974820435595601,0.898819408654221,0.864552199498777,1.1948476395262,0.569003702859245,0.799739588268102,1.1270773567308,0.610953983535943,0.387904974335251,0.841629838683823,0.379419222745544,0.590440591918409,1.09899109488962,0.370191491765402,1.1858105083486,2.00214126859313,3.14494392181125,2.69834534861824,1.82574109249653,3.61765739628625,4.32863948028414,3.74004978686054,2.43202840162553,3.29473695825698,2.87536413054709,2.97712758134803,4.68056509671841,2.52578877947112,2.15276896226295,0,5.54259570499814,0.947457058852424,0.814824882210129,1.35796068620151,1.64283173801951,1.34005005953453,2.85652369063216,2.34160377429359,1.89162172927429,1.99318220683897,1.43509291791738,5.24362607090362,3.9717545829156,2.74833211304872,51.2690365393526,40.2490206025845,0.983528546038072,1.37968373152366,0.642202359951168,0.117211686592203,0,1.51482556322624,0,0.390438744296638,0,0,0,0,0,0,0,0,1.27746076687442,0.890328018336276,0.325773918707152,3.29940245945071,1.32745138339963,0.728341908464944,0.906970670894253,1.13163047853539,1.18120757152309,1.22974059177571,1.55056975900933,2.54473610634254,1.06949213515416,2.21225730555071,4.21674434299995,0,0.340439605753788,0.720244376125241,1.29358683782755,0.428674070063185,0.886701168211368,0.713475270408282,0.822745103010605,0,2.3467170806371,0,0.441056796109924,1.31909002353184,1.45317984026315,0.904693873922338,0.954978752025092,0.984845398470368,0.582961673259701,0.370850604021019,12.9861869406368,4.12773735926445,7.22258656741876,5.65105371014073,9.84198439591381,9.60868327467395,0.509935289981566,1.81936888020755,1.93479963326193,0,0.158167996790568,0.609958401380546,0.432021363287205,0.627264888043406,1.09181281873089,1.21377911746339,0.991841468704031,0.785267825952089,1.03691978633434,1.86401793926078,0,0,0.496375471371293,0.583353565032143,0.904118764344118,0.337912250981556,0.234714477291508,0.2604087696879,0.314578033277133,0.241584120826006,0,8.21628913633263,2.22997736819181,3.59488350076895,4.54722880422283,4.833720783022,5.56307793387542,3.24527713703916,3.54454865218985,3.23092639834072,2.81965184623499,2.31900225814733,4.48306251402861,4.32953287381483,4.55819918508119,0.226730383615211,0,0.0897138566094757,0,2.51146472241848,3.56596703357246,2.56412273974171,1.50057865355346,0.501572104035363,0.564751842617067,0.460325236507177,1.71868654031819,1.03111909406213,0,0.755393897389701,0,0.45032120322422,0,0,0.726511433089237,0.798049746802062,0.853668028770671,1.45864030240976,1.04806581313991,1.65459157605013,1.33348036680969,0.618105171716683,2.88827288632634,0.758091635291392,1.77435509923168,1.88626341386076,0.842773567228942,0.448176066834085,0.631790158511746,0.476293691283074,1.73826488917283,0.964546102318525,1.23625770240992,1.03039244094078,1.71434626192708,1.4198064492747,1.1921809497366,1.74415699958794,1.2234219453993,1.69229215783353,1.28049581010941,1.57841826862706,1.35804113845862,1.68342681497322,0.949080144993393,0.788035859004508,0.409231043169689,1.23949472948773,0.578719832943424,1.49886346762768,1.16965804222704,1.28922632428979,2.67803664896381,4.19123696327079,2.78241402744506
|short_description=p2@Cyth4
}}

Revision as of 11:06, 13 September 2013

Short description:p2@Cyth4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Cyth4_5end
Coexpression cluster:MCL_coexpression_mm9:316
Association with transcript: 65bp_to_ENSMUST00000043069, ENSMUST00000109713, ENSMUST00000169640, NM_028195, uc007wpr.1, uc007wps.1, uc007wpt.1, uc007wpu.1, uc011zvu.1_5end
EntrezGene:Cyth4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Cyth4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E915.49
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.96
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F22.11
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E62.74
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.88
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E418.83
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E811.28
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A16.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A34.66
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A218.30
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A418.65
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A620.80
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.19
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H26.75
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I97.31
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.72
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D23.44
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.57
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.85
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G831.39
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H121.88
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H324.61
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G929.41
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H238.25
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H433.99
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A28.05
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I912.33
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A114.45
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C742.75
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E743.51
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D241.92
Mouse Microglia, donor1.CNhs12629.11718-123C811.38
Mouse Microglia, donor2.CNhs12634.11736-123E86.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.64
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.40
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.37
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.61
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.97
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.26
accessory axillary lymph node, adult.CNhs10475.1063-29H927.97
adrenal gland, adult.CNhs10508.49-24D72.38
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F51.06
adrenal gland, neonate N00.CNhs11191.1311-23C10.82
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H11.88
bone (os femoris), adult.CNhs10483.56-12G27.96
bone (os femoris), neonate N02.CNhs11227.1985-43F52.75
bone (os femoris), neonate N16.CNhs11225.1525-43A63.31
bone (os femoris), neonate N20.CNhs11195.1350-25C37.27
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H71.79
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.83
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.30
corpora quadrigemina, adult.CNhs10501.16-22A40.60
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F10.25
cortex, adult.CNhs10473.12-14D51.04
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.42
diencephalon, neonate N30.CNhs11201.1388-42B20.81
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.81
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A25.60
epididymis, adult.CNhs10490.58-23B21.26
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C60.78
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.75
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G80.56
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E21.06
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B51.85
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C811.24
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D26.18
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D54.26
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.82
heart, neonate N10.CNhs11118.749-24G11.31
heart, neonate N16.CNhs11209.782-15G11.13
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D33.73
heart, neonate N30.CNhs11202.1390-42D21.48
hippocampus, adult.CNhs10478.13-16E80.63
hippocampus, neonate N00.CNhs11228.627-43G10.51
intestinal mucosa, adult.CNhs10506.860-29I32.31
intestine, adult.CNhs10496.178-9A31.06
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.97
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.86
intestine, neonate N30.CNhs11131.1384-42G11.19
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.80
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.84
kidney, neonate N10.CNhs11206.758-6D50.38
kidney, neonate N20.CNhs11113.832-19I10.59
kidney, neonate N25.CNhs11122.1353-25F31.10
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B21.19
liver, embryo E12.CNhs10601.355-15F82.00
liver, embryo E13.CNhs10524.378-3H63.14
liver, embryo E14.CNhs10594.409-16E12.70
liver, embryo E15.CNhs10520.433-16D71.83
liver, embryo E16.CNhs10523.462-17F53.62
liver, embryo E17.CNhs10510.481-18A34.33
liver, embryo E18.CNhs10579.499-43G43.74
liver, neonate N00.CNhs11117.641-24F42.43
liver, neonate N03.CNhs11123.1345-25G23.29
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H22.98
liver, neonate N10.CNhs11115.751-24B94.68
liver, neonate N20.CNhs11220.823-25A32.53
liver, neonate N25.CNhs11198.1368-26H12.15
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B15.54
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F80.81
lung, embryo E15.CNhs11020.432-17C51.36
lung, embryo E16.CNhs10998.458-17B61.64
lung, embryo E17.CNhs10605.480-44A61.34
lung, embryo E18.CNhs10583.1287-20I62.86
lung, neonate N00.CNhs11224.640-42C62.34
lung, neonate N06.CNhs11212.683-20E51.89
lung, neonate N07.CNhs11111.715-19A31.99
lung, neonate N10.CNhs11219.750-23E61.44
lung, neonate N20.CNhs11109.822-18A45.24
lung, neonate N25.CNhs11119.1359-25C73.97
lung, neonate N30.CNhs11133.1394-42H22.75
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A151.27
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A140.25
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H21.38
medulla oblongata, adult.CNhs10477.17-12C20.64
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.51
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I71.28
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G63.30
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E51.13
pancreas, embryo E17.CNhs10599.1558-45G31.18
pancreas, embryo E18.CNhs10580.1535-43I71.23
pancreas, neonate N00.CNhs11105.645-26G91.55
pancreas, neonate N01.CNhs11138.1531-43D72.54
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B62.21
pancreas, neonate N25.CNhs11094.1555-45E24.22
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C71.29
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.89
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.82
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I72.35
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C31.32
skin, neonate N00.CNhs11124.650-25G41.45
skin, neonate N03.CNhs11215.662-22H30.90
skin, neonate N06.CNhs11097.693-20I50.95
skin, neonate N10.CNhs11108.762-6C40.98
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G212.99
spleen, embryo E16.CNhs11035.461-43C14.13
spleen, embryo E18.CNhs11011.1271-21F27.22
spleen, neonate N10.CNhs11116.752-24D15.65
spleen, neonate N20.CNhs11112.824-19H19.84
spleen, neonate N25.CNhs11099.1354-25G39.61
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.82
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.93
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B81.21
stomach, neonate N07.CNhs11210.718-18A90.99
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I11.04
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.90
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B58.22
thymus, embryo E14.CNhs11041.402-44I42.23
thymus, embryo E15.CNhs11005.430-45I23.59
thymus, embryo E16.CNhs11002.456-26C54.55
thymus, embryo E17.CNhs10581.478-18C14.83
thymus, embryo E18.CNhs10595.1273-19G45.56
thymus, neonate N02.CNhs11181.1541-43F83.25
thymus, neonate N03.CNhs11137.2104-43C73.54
thymus, neonate N06.CNhs11197.681-26C43.23
thymus, neonate N07.CNhs11211.713-19D32.82
thymus, neonate N10.CNhs11194.748-24E42.32
thymus, neonate N20.CNhs11186.820-7A24.48
thymus, neonate N25.CNhs11125.1362-25G74.33
thymus, neonate N30.CNhs11132.1393-42G24.56
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E42.51
uterus, adult pregnant day19.CNhs10497.590-15F53.57
uterus, adult.CNhs10509.92-27E52.56
vagina, adult.CNhs10502.89-27D51.50
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.03
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.73
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F21.65
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.89
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.45
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.63
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.36
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.24
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I51.50
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C62.68
whole body, neonate N06.CNhs10515.692-21D14.19
whole body, neonate N10.CNhs10518.761-6B42.78





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
hemolymphoid system1.55e-2148
immune system1.55e-2148
hematopoietic system7.01e-2045
blood island7.01e-2045
bone marrow8.71e-1116
bone element8.96e-1122
skeletal element8.96e-1122
skeletal system8.96e-1122
hemopoietic organ2.89e-1029
immune organ2.89e-1029
lateral plate mesoderm4.04e-1087
foregut1.94e-0980
musculoskeletal system3.62e-0932
mixed endoderm/mesoderm-derived structure4.52e-0935
connective tissue3.51e-0846
respiratory system2.63e-0742
mesoderm3.79e-07120
mesoderm-derived structure3.79e-07120
presumptive mesoderm3.79e-07120
respiratory tract4.28e-0741
gland of gut4.39e-0724
thymus7.04e-0723
neck7.04e-0723
respiratory system epithelium7.04e-0723
hemolymphoid system gland7.04e-0723
pharyngeal epithelium7.04e-0723
thymic region7.04e-0723
pharyngeal gland7.04e-0723
entire pharyngeal arch endoderm7.04e-0723
thymus primordium7.04e-0723
early pharyngeal endoderm7.04e-0723
endo-epithelium8.15e-0769







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