FFCP PHASE1:Hg19::chr5:56471592..56471640,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=65056|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=29520|TSSclassifier=W|UniProt=|association_with_transcript=-132bp_to_ENST00000511209_5end|description=CAGE_peak_5_at_GPBP1_5end|id=chr5:56471592..56471640,+|ontology_enrichment_celltype=CL:0000738!1.70e-24!140;CL:0002031!8.83e-22!124;CL:0002032!2.66e-20!165;CL:0000837!2.66e-20!165;CL:0000037!3.77e-20!172;CL:0000566!3.77e-20!172;CL:0002087!1.28e-19!119;CL:0000988!9.89e-18!182;CL:0002057!1.02e-11!42;CL:0000542!1.86e-11!53;CL:0000051!1.86e-11!53;CL:0000838!2.57e-11!52;CL:0000860!6.77e-11!45;CL:0000766!1.63e-10!76;CL:0000557!3.01e-10!71;CL:0000839!5.59e-10!70;CL:0000763!9.20e-10!112;CL:0000049!9.20e-10!112;CL:0002009!3.75e-09!65;CL:0002194!3.11e-08!63;CL:0000576!3.11e-08!63;CL:0000040!3.11e-08!63;CL:0000559!3.11e-08!63|ontology_enrichment_celltype_v019=CL:0000860;1.15e-18;33!CL:0002057;1.15e-18;33!CL:0000453;4.44e-14;5!CL:0000473;6.52e-13;39!CL:0000234;6.52e-13;39!CL:0000990;2.46e-10;8!CL:0002087;2.50e-10;104!CL:0000576;2.36e-09;48!CL:0000451;2.71e-08;10!CL:0000766;2.86e-08;69!CL:0000623;3.36e-08;3!CL:0000791;2.34e-07;18!CL:0000789;2.34e-07;18!CL:0002419;2.34e-07;18!CL:0000624;7.47e-07;6|ontology_enrichment_celltype_v019_2=CL:0000738,2.25e-34,136;CL:0002032,2.38e-28,161;CL:0000837,2.38e-28,161;CL:0002031,4.19e-28,120;CL:0000037,1.36e-26,168;CL:0000988,1.54e-24,177;CL:0002087,5.00e-22,115;CL:0000766,1.21e-17,72;CL:0000860,3.30e-17,42;CL:0002057,3.30e-17,42;CL:0000557,1.59e-16,67;CL:0000763,2.43e-16,108;CL:0000049,2.43e-16,108;CL:0000473,2.12e-14,48;CL:0000234,2.12e-14,48;CL:0002009,4.51e-14,61;CL:0000453,5.14e-14,5;CL:0000839,9.36e-14,66;CL:0000838,6.62e-12,52;CL:0002194,1.03e-11,59;CL:0000576,1.03e-11,59;CL:0000040,1.03e-11,59;CL:0000559,1.03e-11,59;CL:0000542,1.37e-11,53;CL:0000051,1.37e-11,53;CL:0000990,3.45e-10,8;CL:0000451,3.54e-08,10;CL:0000623,5.39e-08,3;CL:0000825,5.39e-08,3;CL:0000134,6.77e-08,354;CL:0002320,1.70e-07,361;CL:0000791,2.64e-07,18;CL:0000789,2.64e-07,18;CL:0002420,2.64e-07,18;CL:0002419,2.64e-07,18;CL:0000790,2.64e-07,18;CL:0000624,5.40e-07,6|ontology_enrichment_development_v019=CL:0002057;1.01e-12;42!CL:0000790;2.34e-07;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!2.49e-08!102;UBERON:0003061!2.49e-08!102;UBERON:0002371!6.15e-08!80;UBERON:0001474!2.66e-07!86;UBERON:0002193!5.82e-07!112|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.05e-15,76;UBERON:0001474,1.63e-13,82;UBERON:0002405,2.61e-13,93;UBERON:0002390,2.90e-12,98;UBERON:0003061,2.90e-12,98;UBERON:0004765,1.02e-11,90;UBERON:0002193,1.79e-10,108;UBERON:0001434,6.79e-10,100;UBERON:0002384,5.92e-07,371|phase1_expression=0.181678379270557,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0.123766352960047,0.331397375727916,0.672325146451775,0,0,0.487932798790507,0,0,0,0,0.273748850145768,0.376627918784408,0.61130724598361,0.164201178899891,0.472264687882075,0,4.98978217526377,1.39334510984468,0,0,0,0.0774672005803016,0.284338464974843,0,0,0.601633342410425,1.73608696572681,0.223915474239924,0,0.257575567634187,0,0.755751887377619,0.242584061187816,0.464858073811369,0.411167888021826,0,10.3569261235974,2.56160706529101,2.60130452877444,5.5159308917859,1.29096936716765,0,0.376484679085209,0.272906150057846,0.449446968890169,6.42776173978895,4.49300637906531,3.19668562899521,9.23583640522805,3.39088217956774,1.70489900213078,2.03146467040009,0.56738522469114,1.24564449799115,5.02497330513487,0.521482918420201,1.52032191293582,3.63239701580021,2.20966581592539,2.84816148696796,0.845021145247767,0.637812899895131,0.419317291016752,0.22465726229299,0.300353785683013,0.16072558669708,0.285012743741249,0.19891667719909,0.182664153764634,0,0,1.77901850772711,1.70692089026603,0.400395987036012,0.574752439954483,0,0,2.84606484554724,4.11066032559657,2.6759125968766,2.64342657158052,4.48406850385229,0.526768169550154,4.32761494250433,3.93010762749165,1.85041349099558,0.83593247695339,0.651844533267181,1.89379122293893,0,0.668462741311041,1.47302953737419,1.55073726208535,0.541607727530031,0.512365278902701,0.650296737799391,0.493313713811028,0.276350017785848,0,1.18629250529648,0.802622484269139,0,0.793165398882963,0,0.34362744548263,0.506039384039006,0.637130828648193,0.651083453856419,0,0.903450714466637,0.895906278080929,1.24930726552346,0.710331756132051,0.821127996921047,3.42731463482045,1.33720097891754,1.01377082717959,0,0,0,0.361439152384566,0,0.144846518960824,0,0,0,0,0.175669571386252,0.261958150995425,0,0,0.324547393654683,0.348259474598534,0.132957960518865,1.19245312152671,0.571994910780128,0,0,0,0,0,0,0,0.626984899610432,0.258416759169329,0,0.33472061276467,0.402829317109147,0,0,0,0,0.17859945656816,0,0.112611480483322,0,0,0,1.31780417436063,0,0,0,0.12663051166458,0,0.286836620748814,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0.117434498643765,0.161872944368132,0,0,0.122834317311768,0.103325781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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=65056 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29520 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=-132bp_to_ENST00000511209_5end | |||
|description=CAGE_peak_5_at_GPBP1_5end | |||
|id=chr5:56471592..56471640,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.70e-24!140;CL:0002031!8.83e-22!124;CL:0002032!2.66e-20!165;CL:0000837!2.66e-20!165;CL:0000037!3.77e-20!172;CL:0000566!3.77e-20!172;CL:0002087!1.28e-19!119;CL:0000988!9.89e-18!182;CL:0002057!1.02e-11!42;CL:0000542!1.86e-11!53;CL:0000051!1.86e-11!53;CL:0000838!2.57e-11!52;CL:0000860!6.77e-11!45;CL:0000766!1.63e-10!76;CL:0000557!3.01e-10!71;CL:0000839!5.59e-10!70;CL:0000763!9.20e-10!112;CL:0000049!9.20e-10!112;CL:0002009!3.75e-09!65;CL:0002194!3.11e-08!63;CL:0000576!3.11e-08!63;CL:0000040!3.11e-08!63;CL:0000559!3.11e-08!63 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.15e-18;33!CL:0002057;1.15e-18;33!CL:0000453;4.44e-14;5!CL:0000473;6.52e-13;39!CL:0000234;6.52e-13;39!CL:0000990;2.46e-10;8!CL:0002087;2.50e-10;104!CL:0000576;2.36e-09;48!CL:0000451;2.71e-08;10!CL:0000766;2.86e-08;69!CL:0000623;3.36e-08;3!CL:0000791;2.34e-07;18!CL:0000789;2.34e-07;18!CL:0002419;2.34e-07;18!CL:0000624;7.47e-07;6 | |||
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|ontology_enrichment_development_v019=CL:0002057;1.01e-12;42!CL:0000790;2.34e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.49e-08!102;UBERON:0003061!2.49e-08!102;UBERON:0002371!6.15e-08!80;UBERON:0001474!2.66e-07!86;UBERON:0002193!5.82e-07!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.05e-15,76;UBERON:0001474,1.63e-13,82;UBERON:0002405,2.61e-13,93;UBERON:0002390,2.90e-12,98;UBERON:0003061,2.90e-12,98;UBERON:0004765,1.02e-11,90;UBERON:0002193,1.79e-10,108;UBERON:0001434,6.79e-10,100;UBERON:0002384,5.92e-07,371 | |||
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| |||
|short_description=p5@GPBP1 | |||
}} |
Revision as of 15:57, 13 September 2013
Short description: | p5@GPBP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_GPBP1_5end |
Coexpression cluster: | NA |
Association with transcript: | -132bp_to_ENST00000511209_5end |
EntrezGene: | GPBP1 |
HGNC: | 29520 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.05e-15 | 76 |
bone element | 1.63e-13 | 82 |
immune system | 2.61e-13 | 93 |
hematopoietic system | 2.90e-12 | 98 |
blood island | 2.90e-12 | 98 |
skeletal element | 1.02e-11 | 90 |
hemolymphoid system | 1.79e-10 | 108 |
skeletal system | 6.79e-10 | 100 |
connective tissue | 5.92e-07 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.