FFCP PHASE1:Mm9::chr1:174436755..174436773,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1745|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:174436755..174436773,+|id=chr1:174436755..174436773,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000349,1.02e-08,3;CL:0000351,1.02e-08,3;CL:0002494,3.00e-08,3;CL:0000737,3.00e-08,3;CL:0000746,3.00e-08,3;CL:0000513,3.00e-08,3;CL:0000068,3.76e-08,3;CL:0002202,3.76e-08,3;CL:0000069,3.76e-08,3;CL:0002632,3.76e-08,3;CL:0002368,3.76e-08,3;CL:0000307,3.76e-08,3;CL:0000377,3.76e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005178!3.68e-07!17;UBERON:0005181!3.68e-07!17;UBERON:0002224!3.68e-07!17;UBERON:0000915!3.68e-07!17;UBERON:0008947!3.68e-07!17;UBERON:0003258!3.68e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0005178,5.04e-10,17;UBERON:0005181,5.04e-10,17;UBERON:0002224,5.04e-10,17;UBERON:0000915,5.04e-10,17;UBERON:0008947,5.04e-10,17;UBERON:0003258,5.04e-10,17;UBERON:0000358,1.02e-08,3;UBERON:0000307,1.02e-08,3;UBERON:0007010,1.02e-08,3;UBERON:0003126,3.76e-08,3;UBERON:0001005,3.76e-08,3;UBERON:0007196,3.76e-08,3;UBERON:0001558,3.76e-08,3|phase1_expression=0,0,0,0.30246421130683,0.500895729946347,0,0.467225281191051,0.258246646883153,0,0,0.171217968225505,0.239316476986009,1.19840510951844,0.524522414513984,0.333109761815663,0.404950534779652,0.699561878128147,0.473193248037357,0.137114433605739,0.42438965179803,0.0850432901510698,0.397163804803541,0,1.11994695955385,0.22940928106717,0.57423196411502,0,0.430942465371778,0.380046838912748,0,0.443461021310609,0,0,0,0.288851619751275,0.498703936075477,0.408338712524738,0.418531630736908,0,1.0470474879476,0.588231488031014,0,0,0.377690453926732,0.405507724878058,0.183546752161682,0.782391344348039,2.18025156380447,0,0.388859798148567,0.55994568650145,0,0,0,0.672187598284928,1.80081605225163,2.0057340795713,1.54701627683233,0,0,0,0.677689064138264,0.889294796111139,0.899899717281399,1.97773272513395,0.7104801149461,1.79760066311043,0.384218305321555,0.103689612308478,0,0,0.285650984403804,0.220868540951614,0.122490799214954,0.0958454710182364,0.919218786610021,0,0,0,0,0,0.52091337055676,0,0,0,0.589257170947335,0.711858403995515,0.186399445825301,0,0.151143120213571,0.869593466105033,0,0,0,0,0,0,1.02258193546835,2.07828803682295,0.35333957451034,0,0,0,0,1.5154372870785,2.78695852022608,1.51657333504435,0,0,0.29688427812965,0.173485326766136,0.304465478312141,0.461230994512117,0.60289056221049,0.352766121407114,0.125666591329675,0.741584903203122,0.144599356919912,0.884610551949874,0.647067399789637,0.220841518460394,2.42437626567611,0,0,0,0.510914110417183,2.39630249011841,0.599902730993408,0.762421362438388,0,0,0,0,0,0,0,0.305518091550949,0.124406970610093,0.252722758433675,0,0.130120442962704,0,0,0.30140963567143,0.272145996605311,0.12811372028485,0.655912071918102,0,0,0,0,0.219195732427575,0.278047249225598,0.348252166522167,0.205782136407943,0,0.702213187313235,0.772043721344145,0.568326998791185,0.621377317606506,0.938104239924385,1.08037236876609,0.710234206755631,0.196764231747404,0.462801338662135,0.465067889500816,0.268273401399619,0.350296027101508,1.31647879930784,0.820837320395476,0.648550476366846,0.292399974850665,0.439100230582101,0.671032093801859,0,0,0,0.264450566663544,0,0.464473343720877,0.128867461322093,0.201683524623343,0.889512175379481,0.190225626112559,0.474529061544512,0.329397909448022,1.00534083520108,0,0.58489226135736,0,0.216138049874694,0.199141273254367,0.189667900953082,0.114248512609729,0,0.407302655690628,0.387904974335251,0.0701358198903186,0.379419222745544,0.442830443938806,0.627994911365499,0.123397163921801,0,0.333690211432188,0.589676985339609,0.224862112384854,0.202860121388503,0.241177159752417,0.50925170356284,0.287696137450811,0.648540907100142,0,1.43768206527355,0.372140947668503,0,0,0,0,0.923765950833023,0.37898282354097,0.488894929326078,0.678980343100753,0.938760993154008,1.00503754465089,0,0.585400943573396,1.10344600874334,1.32878813789265,0.797273843287435,1.96635977658886,2.41758974612254,1.73578870297814,1.50791283939272,1.63171705145613,0,0,0,0,0.491804836130026,0.252470927204373,0.315508219416257,0.390438744296638,0,0.238968797952552,0.668396022247182,0.849229592366497,0.809621403349789,0.292255857911312,0,0,0.425820255624806,0.35613120733451,0.325773918707152,0.329940245945071,0,0.485561272309963,0,0.377210159511796,0.590603785761546,0.307435147943927,0,1.09060118843252,0,0,0,0,0.340439605753788,0,0,0,0.177340233642274,0.178368817602071,0,0,0.938686832254841,1.48282449604674,0,0.16488625294148,0.484393280087717,0.72375509913787,0.954978752025092,0.492422699235184,0.582961673259701,0,0.341741761595705,0.412773735926445,0.185194527369712,0.188368457004691,0.27338845544205,0,0.169978429993855,0.979660166265606,0.414599921413271,5.72802370809068,0.316335993581135,0.406638934253697,0.216010681643603,0,0.87345025498471,0.809186078308924,0.991841468704031,1.57053565190418,0.259229946583586,0.621339313086926,0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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1745 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:174436755..174436773,+ | |||
|id=chr1:174436755..174436773,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.02e-08,3;CL:0000351,1.02e-08,3;CL:0002494,3.00e-08,3;CL:0000737,3.00e-08,3;CL:0000746,3.00e-08,3;CL:0000513,3.00e-08,3;CL:0000068,3.76e-08,3;CL:0002202,3.76e-08,3;CL:0000069,3.76e-08,3;CL:0002632,3.76e-08,3;CL:0002368,3.76e-08,3;CL:0000307,3.76e-08,3;CL:0000377,3.76e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005178!3.68e-07!17;UBERON:0005181!3.68e-07!17;UBERON:0002224!3.68e-07!17;UBERON:0000915!3.68e-07!17;UBERON:0008947!3.68e-07!17;UBERON:0003258!3.68e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005178,5.04e-10,17;UBERON:0005181,5.04e-10,17;UBERON:0002224,5.04e-10,17;UBERON:0000915,5.04e-10,17;UBERON:0008947,5.04e-10,17;UBERON:0003258,5.04e-10,17;UBERON:0000358,1.02e-08,3;UBERON:0000307,1.02e-08,3;UBERON:0007010,1.02e-08,3;UBERON:0003126,3.76e-08,3;UBERON:0001005,3.76e-08,3;UBERON:0007196,3.76e-08,3;UBERON:0001558,3.76e-08,3 | |||
|phase1_expression=0,0,0,0.30246421130683,0.500895729946347,0,0.467225281191051,0.258246646883153,0,0,0.171217968225505,0.239316476986009,1.19840510951844,0.524522414513984,0.333109761815663,0.404950534779652,0.699561878128147,0.473193248037357,0.137114433605739,0.42438965179803,0.0850432901510698,0.397163804803541,0,1.11994695955385,0.22940928106717,0.57423196411502,0,0.430942465371778,0.380046838912748,0,0.443461021310609,0,0,0,0.288851619751275,0.498703936075477,0.408338712524738,0.418531630736908,0,1.0470474879476,0.588231488031014,0,0,0.377690453926732,0.405507724878058,0.183546752161682,0.782391344348039,2.18025156380447,0,0.388859798148567,0.55994568650145,0,0,0,0.672187598284928,1.80081605225163,2.0057340795713,1.54701627683233,0,0,0,0.677689064138264,0.889294796111139,0.899899717281399,1.97773272513395,0.7104801149461,1.79760066311043,0.384218305321555,0.103689612308478,0,0,0.285650984403804,0.220868540951614,0.122490799214954,0.0958454710182364,0.919218786610021,0,0,0,0,0,0.52091337055676,0,0,0,0.589257170947335,0.711858403995515,0.186399445825301,0,0.151143120213571,0.869593466105033,0,0,0,0,0,0,1.02258193546835,2.07828803682295,0.35333957451034,0,0,0,0,1.5154372870785,2.78695852022608,1.51657333504435,0,0,0.29688427812965,0.173485326766136,0.304465478312141,0.461230994512117,0.60289056221049,0.352766121407114,0.125666591329675,0.741584903203122,0.144599356919912,0.884610551949874,0.647067399789637,0.220841518460394,2.42437626567611,0,0,0,0.510914110417183,2.39630249011841,0.599902730993408,0.762421362438388,0,0,0,0,0,0,0,0.305518091550949,0.124406970610093,0.252722758433675,0,0.130120442962704,0,0,0.30140963567143,0.272145996605311,0.12811372028485,0.655912071918102,0,0,0,0,0.219195732427575,0.278047249225598,0.348252166522167,0.205782136407943,0,0.702213187313235,0.772043721344145,0.568326998791185,0.621377317606506,0.938104239924385,1.08037236876609,0.710234206755631,0.196764231747404,0.462801338662135,0.465067889500816,0.268273401399619,0.350296027101508,1.31647879930784,0.820837320395476,0.648550476366846,0.292399974850665,0.439100230582101,0.671032093801859,0,0,0,0.264450566663544,0,0.464473343720877,0.128867461322093,0.201683524623343,0.889512175379481,0.190225626112559,0.474529061544512,0.329397909448022,1.00534083520108,0,0.58489226135736,0,0.216138049874694,0.199141273254367,0.189667900953082,0.114248512609729,0,0.407302655690628,0.387904974335251,0.0701358198903186,0.379419222745544,0.442830443938806,0.627994911365499,0.123397163921801,0,0.333690211432188,0.589676985339609,0.224862112384854,0.202860121388503,0.241177159752417,0.50925170356284,0.287696137450811,0.648540907100142,0,1.43768206527355,0.372140947668503,0,0,0,0,0.923765950833023,0.37898282354097,0.488894929326078,0.678980343100753,0.938760993154008,1.00503754465089,0,0.585400943573396,1.10344600874334,1.32878813789265,0.797273843287435,1.96635977658886,2.41758974612254,1.73578870297814,1.50791283939272,1.63171705145613,0,0,0,0,0.491804836130026,0.252470927204373,0.315508219416257,0.390438744296638,0,0.238968797952552,0.668396022247182,0.849229592366497,0.809621403349789,0.292255857911312,0,0,0.425820255624806,0.35613120733451,0.325773918707152,0.329940245945071,0,0.485561272309963,0,0.377210159511796,0.590603785761546,0.307435147943927,0,1.09060118843252,0,0,0,0,0.340439605753788,0,0,0,0.177340233642274,0.178368817602071,0,0,0.938686832254841,1.48282449604674,0,0.16488625294148,0.484393280087717,0.72375509913787,0.954978752025092,0.492422699235184,0.582961673259701,0,0.341741761595705,0.412773735926445,0.185194527369712,0.188368457004691,0.27338845544205,0,0.169978429993855,0.979660166265606,0.414599921413271,5.72802370809068,0.316335993581135,0.406638934253697,0.216010681643603,0,0.87345025498471,0.809186078308924,0.991841468704031,1.57053565190418,0.259229946583586,0.621339313086926,0,0,0.165458490457098,0,0.258319646955462,0.844780627453891,0.234714477291508,0.39061315453185,0,0,0,0.316011120628178,0.202725215290164,0.308132871494482,0.389762468933385,0,0.39736270956253,0.120195449519969,0.738447635872886,0.201932899896295,0.381034033274999,0.100826185136841,0.38983152295901,0.384847366561318,0,0.680191150845634,1.55390167361845,2.9605572681127,2.85403847818933,0.19318959403219,0,0.36630324853453,0.214368379079066,0.501572104035363,0.564751842617067,0,0,0.171853182343688,0.685082519770642,0,0.675022500231806,0,0,0,0.103787347584177,0,0,0.243106717068294,0,0.183843508450014,0.44449345560323,0.206035057238894,0.320919209591815,0,1.2673964994512,0.188626341386076,0.280924522409647,0.256100609619477,0.287177344778066,0.476293691283074,0.463537303779422,0.578727661391115,0,1.17759136107518,0,0.887379030796687,0.238436189947321,0.436039249896986,0.941093804153306,0.169229215783353,0.73171189149109,0.526139422875686,0.135804113845862,1.68342681497322,0.593175090620871,0.197008964751127,0,0.619747364743864,0.192906610981141,0.499621155875892,0.701794825336225,0.644613162144895,0.382576664137687,0.441182838239031,0.231867835620421 | |||
|short_description=p@chr1:174436755..174436773,+ | |||
}} |
Revision as of 19:47, 13 September 2013
Short description: | p@chr1:174436755..174436773, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:174436755..174436773, + |
Coexpression cluster: | MCL_coexpression_mm9:1745 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.02e-08 | 3 |
trophoblast cell | 1.02e-08 | 3 |
cardiocyte | 3.00e-08 | 3 |
striated muscle cell | 3.00e-08 | 3 |
cardiac muscle cell | 3.00e-08 | 3 |
cardiac muscle myoblast | 3.00e-08 | 3 |
duct epithelial cell | 3.76e-08 | 3 |
epithelial cell of tracheobronchial tree | 3.76e-08 | 3 |
branched duct epithelial cell | 3.76e-08 | 3 |
epithelial cell of lower respiratory tract | 3.76e-08 | 3 |
respiratory epithelial cell | 3.76e-08 | 3 |
tracheal epithelial cell | 3.76e-08 | 3 |
tracheoblast | 3.76e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
thoracic cavity element | 5.04e-10 | 17 |
thoracic segment organ | 5.04e-10 | 17 |
thoracic cavity | 5.04e-10 | 17 |
thoracic segment of trunk | 5.04e-10 | 17 |
respiratory primordium | 5.04e-10 | 17 |
endoderm of foregut | 5.04e-10 | 17 |
blastocyst | 1.02e-08 | 3 |
blastula | 1.02e-08 | 3 |
cleaving embryo | 1.02e-08 | 3 |
trachea | 3.76e-08 | 3 |
respiratory airway | 3.76e-08 | 3 |
tracheobronchial tree | 3.76e-08 | 3 |
lower respiratory tract | 3.76e-08 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.