FFCP PHASE1:Mm9::chr1:51534755..51534767,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=109019|HGNC=|MCL_coexpression_id=7|UniProt=Q8BGW5|association_with_transcript=475bp_to_ENSMUST00000027279,NM_028696,uc007axm.1,uc007axn.1,uc007axp.1_5end|description=CAGE_peak_3_at_Obfc2a_5end|id=chr1:51534755..51534767,-|ontology_enrichment_celltype=CL:0000838!3.38e-14!12;CL:0000791!3.04e-13!9;CL:0000789!3.04e-13!9;CL:0002420!3.04e-13!9;CL:0002419!3.04e-13!9;CL:0000790!3.04e-13!9;CL:0000084!4.76e-13!11;CL:0000827!4.76e-13!11;CL:0000542!6.50e-13!13;CL:0000051!6.50e-13!13;CL:0000893!1.27e-11!6;CL:0002489!1.27e-11!6;CL:0000898!1.27e-11!6;CL:0000809!1.27e-11!6;CL:0000810!1.27e-11!6;CL:0000895!1.27e-11!6;CL:0000808!1.27e-11!6;CL:0000894!1.27e-11!6;CL:0000806!1.27e-11!6;CL:0000807!1.27e-11!6;CL:0000805!1.27e-11!6;CL:0002425!1.27e-11!6;CL:0002436!1.27e-11!6;CL:0002427!1.27e-11!6;CL:0002428!1.27e-11!6;CL:0002429!1.27e-11!6;CL:0002433!1.27e-11!6;CL:0002431!1.27e-11!6;CL:0002432!1.27e-11!6;CL:0000624!1.57e-11!8;CL:0000738!2.67e-09!17;CL:0002087!2.67e-09!17;CL:0002031!3.23e-08!25;CL:0000988!9.31e-07!32;CL:0002032!9.31e-07!32;CL:0000037!9.31e-07!32;CL:0000566!9.31e-07!32;CL:0000837!9.31e-07!32|ontology_enrichment_celltype_v019_2=CL:0000893,6.34e-47,6;CL:0002489,6.34e-47,6;CL:0000898,6.34e-47,6;CL:0000809,6.34e-47,6;CL:0000810,6.34e-47,6;CL:0000895,6.34e-47,6;CL:0000808,6.34e-47,6;CL:0000894,6.34e-47,6;CL:0000806,6.34e-47,6;CL:0000807,6.34e-47,6;CL:0000805,6.34e-47,6;CL:0002425,6.34e-47,6;CL:0002436,6.34e-47,6;CL:0002427,6.34e-47,6;CL:0002428,6.34e-47,6;CL:0002429,6.34e-47,6;CL:0002433,6.34e-47,6;CL:0002431,6.34e-47,6;CL:0002432,6.34e-47,6;CL:0000624,1.94e-35,8;CL:0000791,1.33e-31,9;CL:0000789,1.33e-31,9;CL:0002420,1.33e-31,9;CL:0002419,1.33e-31,9;CL:0000790,1.33e-31,9;CL:0000084,5.07e-26,11;CL:0000827,5.07e-26,11;CL:0000838,6.33e-24,12;CL:0000542,3.77e-22,13;CL:0000051,3.77e-22,13;CL:0000738,3.97e-17,17;CL:0002087,3.97e-17,17;CL:0002031,7.02e-12,25;CL:0000988,2.00e-09,32;CL:0002032,2.00e-09,32;CL:0000037,2.00e-09,32;CL:0000837,2.00e-09,32;CL:0002320,9.87e-07,46;CL:0000134,9.87e-07,46|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,5.46e-07,3;DOID:4045,5.46e-07,3|ontology_enrichment_uberon=UBERON:0002370!3.54e-18!23;UBERON:0000974!3.54e-18!23;UBERON:0004807!3.54e-18!23;UBERON:0005058!3.54e-18!23;UBERON:0003351!3.54e-18!23;UBERON:0009113!3.54e-18!23;UBERON:0003295!3.54e-18!23;UBERON:0009722!3.54e-18!23;UBERON:0005562!3.54e-18!23;UBERON:0007690!3.54e-18!23;UBERON:0006562!3.17e-17!24;UBERON:0003408!3.17e-17!24;UBERON:0001557!3.17e-17!24;UBERON:0001042!3.17e-17!24;UBERON:0008814!3.17e-17!24;UBERON:0009145!3.17e-17!24;UBERON:0000072!6.34e-17!27;UBERON:0004177!1.84e-13!29;UBERON:0000063!6.06e-12!35;UBERON:0000065!6.32e-12!41;UBERON:0001004!1.62e-11!42;UBERON:0002390!2.18e-09!45;UBERON:0003061!2.18e-09!45;UBERON:0002193!1.67e-08!48;UBERON:0005057!9.11e-08!51;UBERON:0003929!7.24e-07!55|ontology_enrichment_uberon_v019_2=UBERON:0002370,7.48e-13,23;UBERON:0000974,7.48e-13,23;UBERON:0004807,7.48e-13,23;UBERON:0005058,7.48e-13,23;UBERON:0003351,7.48e-13,23;UBERON:0009113,7.48e-13,23;UBERON:0003295,7.48e-13,23;UBERON:0009722,7.48e-13,23;UBERON:0005562,7.48e-13,23;UBERON:0007690,7.48e-13,23;UBERON:0006562,2.40e-12,24;UBERON:0003408,2.40e-12,24;UBERON:0001557,2.40e-12,24;UBERON:0001042,2.40e-12,24;UBERON:0008814,2.40e-12,24;UBERON:0009145,2.40e-12,24;UBERON:0000072,4.75e-11,27;UBERON:0004177,2.47e-10,29;UBERON:0005057,2.47e-10,29;UBERON:0000077,1.14e-08,35;UBERON:0007811,1.91e-08,36;UBERON:0000065,1.74e-07,41;UBERON:0001004,2.54e-07,42;UBERON:0000490,3.36e-07,66;UBERON:0000153,3.65e-07,43;UBERON:0002390,7.19e-07,45;UBERON:0003061,7.19e-07,45;UBERON:0002384,9.87e-07,46|phase1_expression=0,0,0,0,0,0,0,0.774739940649458,3.23814060948833,8.42632294759177,1.71217968225505,2.47293692885543,0.513602189793617,0.174840804837995,0,0,0,0,0.274228867211478,0.42438965179803,0,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0470474879476,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0.672187598284928,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0.432982082022428,0,0,0,0,0,0,0,0,0,0,0.125666591329675,0,0.433798070759735,0,0,0,0,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0.63549621259146,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339956859987711,0,0.276399947608848,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0.288030006257865,0.316011120628178,0.202725215290164,0,0.129920822977795,0.179026695667481,0.198681354781265,0,0.295379054349154,0.302899349844443,0.0762068066549998,0.302478555410522,0.292373642219257,0.384847366561318,0,0,0.443971906748129,0.179427713218951,0.503653849092235,0,0.375364950902364,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0.252697211763798,0,0,0,0.0640251524048693,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0.182927972872773,0.263069711437843,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p3@Obfc2a}} | ||
|EntrezGene=109019 | |||
|HGNC= | |||
|MCL_coexpression_id=7 | |||
|UniProt=Q8BGW5 | |||
|association_with_transcript=475bp_to_ENSMUST00000027279,NM_028696,uc007axm.1,uc007axn.1,uc007axp.1_5end | |||
|description=CAGE_peak_3_at_Obfc2a_5end | |||
|id=chr1:51534755..51534767,- | |||
|ontology_enrichment_celltype=CL:0000838!3.38e-14!12;CL:0000791!3.04e-13!9;CL:0000789!3.04e-13!9;CL:0002420!3.04e-13!9;CL:0002419!3.04e-13!9;CL:0000790!3.04e-13!9;CL:0000084!4.76e-13!11;CL:0000827!4.76e-13!11;CL:0000542!6.50e-13!13;CL:0000051!6.50e-13!13;CL:0000893!1.27e-11!6;CL:0002489!1.27e-11!6;CL:0000898!1.27e-11!6;CL:0000809!1.27e-11!6;CL:0000810!1.27e-11!6;CL:0000895!1.27e-11!6;CL:0000808!1.27e-11!6;CL:0000894!1.27e-11!6;CL:0000806!1.27e-11!6;CL:0000807!1.27e-11!6;CL:0000805!1.27e-11!6;CL:0002425!1.27e-11!6;CL:0002436!1.27e-11!6;CL:0002427!1.27e-11!6;CL:0002428!1.27e-11!6;CL:0002429!1.27e-11!6;CL:0002433!1.27e-11!6;CL:0002431!1.27e-11!6;CL:0002432!1.27e-11!6;CL:0000624!1.57e-11!8;CL:0000738!2.67e-09!17;CL:0002087!2.67e-09!17;CL:0002031!3.23e-08!25;CL:0000988!9.31e-07!32;CL:0002032!9.31e-07!32;CL:0000037!9.31e-07!32;CL:0000566!9.31e-07!32;CL:0000837!9.31e-07!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000893,6.34e-47,6;CL:0002489,6.34e-47,6;CL:0000898,6.34e-47,6;CL:0000809,6.34e-47,6;CL:0000810,6.34e-47,6;CL:0000895,6.34e-47,6;CL:0000808,6.34e-47,6;CL:0000894,6.34e-47,6;CL:0000806,6.34e-47,6;CL:0000807,6.34e-47,6;CL:0000805,6.34e-47,6;CL:0002425,6.34e-47,6;CL:0002436,6.34e-47,6;CL:0002427,6.34e-47,6;CL:0002428,6.34e-47,6;CL:0002429,6.34e-47,6;CL:0002433,6.34e-47,6;CL:0002431,6.34e-47,6;CL:0002432,6.34e-47,6;CL:0000624,1.94e-35,8;CL:0000791,1.33e-31,9;CL:0000789,1.33e-31,9;CL:0002420,1.33e-31,9;CL:0002419,1.33e-31,9;CL:0000790,1.33e-31,9;CL:0000084,5.07e-26,11;CL:0000827,5.07e-26,11;CL:0000838,6.33e-24,12;CL:0000542,3.77e-22,13;CL:0000051,3.77e-22,13;CL:0000738,3.97e-17,17;CL:0002087,3.97e-17,17;CL:0002031,7.02e-12,25;CL:0000988,2.00e-09,32;CL:0002032,2.00e-09,32;CL:0000037,2.00e-09,32;CL:0000837,2.00e-09,32;CL:0002320,9.87e-07,46;CL:0000134,9.87e-07,46 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,5.46e-07,3;DOID:4045,5.46e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0002370!3.54e-18!23;UBERON:0000974!3.54e-18!23;UBERON:0004807!3.54e-18!23;UBERON:0005058!3.54e-18!23;UBERON:0003351!3.54e-18!23;UBERON:0009113!3.54e-18!23;UBERON:0003295!3.54e-18!23;UBERON:0009722!3.54e-18!23;UBERON:0005562!3.54e-18!23;UBERON:0007690!3.54e-18!23;UBERON:0006562!3.17e-17!24;UBERON:0003408!3.17e-17!24;UBERON:0001557!3.17e-17!24;UBERON:0001042!3.17e-17!24;UBERON:0008814!3.17e-17!24;UBERON:0009145!3.17e-17!24;UBERON:0000072!6.34e-17!27;UBERON:0004177!1.84e-13!29;UBERON:0000063!6.06e-12!35;UBERON:0000065!6.32e-12!41;UBERON:0001004!1.62e-11!42;UBERON:0002390!2.18e-09!45;UBERON:0003061!2.18e-09!45;UBERON:0002193!1.67e-08!48;UBERON:0005057!9.11e-08!51;UBERON:0003929!7.24e-07!55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,7.48e-13,23;UBERON:0000974,7.48e-13,23;UBERON:0004807,7.48e-13,23;UBERON:0005058,7.48e-13,23;UBERON:0003351,7.48e-13,23;UBERON:0009113,7.48e-13,23;UBERON:0003295,7.48e-13,23;UBERON:0009722,7.48e-13,23;UBERON:0005562,7.48e-13,23;UBERON:0007690,7.48e-13,23;UBERON:0006562,2.40e-12,24;UBERON:0003408,2.40e-12,24;UBERON:0001557,2.40e-12,24;UBERON:0001042,2.40e-12,24;UBERON:0008814,2.40e-12,24;UBERON:0009145,2.40e-12,24;UBERON:0000072,4.75e-11,27;UBERON:0004177,2.47e-10,29;UBERON:0005057,2.47e-10,29;UBERON:0000077,1.14e-08,35;UBERON:0007811,1.91e-08,36;UBERON:0000065,1.74e-07,41;UBERON:0001004,2.54e-07,42;UBERON:0000490,3.36e-07,66;UBERON:0000153,3.65e-07,43;UBERON:0002390,7.19e-07,45;UBERON:0003061,7.19e-07,45;UBERON:0002384,9.87e-07,46 | |||
|phase1_expression=0,0,0,0,0,0,0,0.774739940649458,3.23814060948833,8.42632294759177,1.71217968225505,2.47293692885543,0.513602189793617,0.174840804837995,0,0,0,0,0.274228867211478,0.42438965179803,0,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0470474879476,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0.672187598284928,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0.432982082022428,0,0,0,0,0,0,0,0,0,0,0.125666591329675,0,0.433798070759735,0,0,0,0,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0.63549621259146,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339956859987711,0,0.276399947608848,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0.288030006257865,0.316011120628178,0.202725215290164,0,0.129920822977795,0.179026695667481,0.198681354781265,0,0.295379054349154,0.302899349844443,0.0762068066549998,0.302478555410522,0.292373642219257,0.384847366561318,0,0,0.443971906748129,0.179427713218951,0.503653849092235,0,0.375364950902364,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0.252697211763798,0,0,0,0.0640251524048693,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0.182927972872773,0.263069711437843,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@Obfc2a | |||
}} |
Revision as of 20:29, 13 September 2013
Short description: | p3@Obfc2a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Obfc2a_5end |
Coexpression cluster: | MCL_coexpression_mm9:7 |
Association with transcript: | 475bp_to_ENSMUST00000027279, NM_028696, uc007axm.1, uc007axn.1, uc007axp.1_5end |
EntrezGene: | Obfc2a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 7.48e-13 | 23 |
neck | 7.48e-13 | 23 |
respiratory system epithelium | 7.48e-13 | 23 |
hemolymphoid system gland | 7.48e-13 | 23 |
pharyngeal epithelium | 7.48e-13 | 23 |
thymic region | 7.48e-13 | 23 |
pharyngeal gland | 7.48e-13 | 23 |
entire pharyngeal arch endoderm | 7.48e-13 | 23 |
thymus primordium | 7.48e-13 | 23 |
early pharyngeal endoderm | 7.48e-13 | 23 |
pharynx | 2.40e-12 | 24 |
gland of gut | 2.40e-12 | 24 |
upper respiratory tract | 2.40e-12 | 24 |
chordate pharynx | 2.40e-12 | 24 |
pharyngeal arch system | 2.40e-12 | 24 |
pharyngeal region of foregut | 2.40e-12 | 24 |
segment of respiratory tract | 4.75e-11 | 27 |
hemopoietic organ | 2.47e-10 | 29 |
immune organ | 2.47e-10 | 29 |
mixed endoderm/mesoderm-derived structure | 1.14e-08 | 35 |
craniocervical region | 1.91e-08 | 36 |
respiratory tract | 1.74e-07 | 41 |
respiratory system | 2.54e-07 | 42 |
unilaminar epithelium | 3.36e-07 | 66 |
anterior region of body | 3.65e-07 | 43 |
hematopoietic system | 7.19e-07 | 45 |
blood island | 7.19e-07 | 45 |
connective tissue | 9.87e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 5.46e-07 | 3 |
muscle cancer | 5.46e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.