FFCP PHASE1:Hg19::chr7:111032997..111033020,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=83943|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=14598|TSSclassifier=S|UniProt=C9JQE1|association_with_transcript=-26bp_to_ENST00000450877_5end|coexpression_cluster_id=C177|description=CAGE_peak_6_at_IMMP2L_5end|id=chr7:111032997..111033020,-|ontology_enrichment_celltype=CL:0000149!7.56e-11!4;CL:0005020!7.21e-10!6;CL:0002138!7.21e-10!6;CL:0005022!7.21e-10!6;CL:0002605!9.93e-09!3;CL:0000064!1.24e-08!3;CL:0005012!1.24e-08!3;CL:0000067!1.24e-08!3;CL:0002304!1.24e-08!3;CL:0002586!1.60e-08!3;CL:0000147!4.12e-08!14;CL:0000325!1.17e-07!39|ontology_enrichment_celltype_v019=CL:0000064;2.29e-17;3!CL:0000067;2.29e-17;3!CL:0005012;2.29e-17;3!CL:0002605;2.29e-17;3!CL:0002304;2.29e-17;3!CL:0002586;2.29e-17;3!CL:0000147;1.62e-14;14!CL:0000149;2.84e-13;4!CL:0000075;1.79e-11;27!CL:0000710;3.07e-10;20!CL:0000128;5.66e-08;7!CL:0000126;5.66e-08;7!CL:0000127;5.66e-08;7|ontology_enrichment_celltype_v019_2=CL:0002586,1.28e-17,3;CL:0000064,1.94e-17,3;CL:0000067,1.94e-17,3;CL:0005012,1.94e-17,3;CL:0002304,1.94e-17,3;CL:0002605,2.11e-17,3;CL:0000147,1.27e-14,14;CL:0000149,1.83e-13,4;CL:0000075,1.85e-11,27;CL:0000710,2.92e-10,20;CL:0000133,2.17e-09,59;CL:0000128,5.47e-08,7;CL:0000126,5.47e-08,7;CL:0000127,5.47e-08,7;CL:0002453,5.47e-08,7;CL:0000221,1.24e-07,72|ontology_enrichment_development_v019=CL:0000133;8.30e-07;59|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:1909;1.67e-26;2|ontology_enrichment_disease_v019_2=DOID:1909,1.67e-26,2|ontology_enrichment_uberon=UBERON:0007625!5.18e-17!11;UBERON:0000970!4.86e-13!20;UBERON:0002104!2.72e-12!21;UBERON:0000019!2.35e-11!19;UBERON:0000047!2.35e-11!19;UBERON:0004088!2.35e-11!19;UBERON:0003072!2.35e-11!19;UBERON:0003071!2.35e-11!19;UBERON:0004128!2.35e-11!19;UBERON:0000020!5.42e-11!23;UBERON:0003075!1.16e-10!86;UBERON:0007284!1.16e-10!86;UBERON:0001032!2.00e-10!24;UBERON:0004456!2.00e-10!24;UBERON:0000488!2.05e-10!4;UBERON:0001456!4.68e-10!21;UBERON:0002346!6.54e-10!90;UBERON:0003056!3.10e-09!61;UBERON:0000966!8.82e-09!5;UBERON:0005388!8.82e-09!5;UBERON:0001802!8.82e-09!5;UBERON:0001778!1.24e-08!3;UBERON:0001775!1.24e-08!3;UBERON:0001781!1.60e-08!3;UBERON:0001782!1.60e-08!3;UBERON:0005424!1.60e-08!3;UBERON:0005085!5.56e-08!29;UBERON:0006947!6.36e-08!3;UBERON:0004054!6.36e-08!3;UBERON:0001473!2.70e-07!8;UBERON:0004536!2.70e-07!8;UBERON:0006558!2.70e-07!8;UBERON:0004121!3.38e-07!169;UBERON:0002203!6.56e-07!6;UBERON:0001768!6.56e-07!6;UBERON:0000924!7.40e-07!173;UBERON:0006601!7.40e-07!173|ontology_enrichment_uberon_v019=UBERON:0007625;7.77e-28;11!UBERON:0000019;4.24e-23;19!UBERON:0000047;4.24e-23;19!UBERON:0004088;4.24e-23;19!UBERON:0010230;4.24e-23;19!UBERON:0000966;5.06e-23;5!UBERON:0005388;5.06e-23;5!UBERON:0001802;5.06e-23;5!UBERON:0000970;6.19e-22;20!UBERON:0002104;7.02e-21;21!UBERON:0001456;7.02e-21;21!UBERON:0000020;4.81e-19;23!UBERON:0010371;1.08e-18;31!UBERON:0001032;3.06e-18;24!UBERON:0004456;3.06e-18;24!UBERON:0001781;2.29e-17;3!UBERON:0001778;2.29e-17;3!UBERON:0001782;2.29e-17;3!UBERON:0001775;2.29e-17;3!UBERON:0000488;2.84e-13;4!UBERON:0002203;3.71e-09;6!UBERON:0001768;3.71e-09;6!UBERON:0002200;3.71e-09;6!UBERON:0001801;1.68e-08;14!UBERON:0001444;7.30e-08;48!UBERON:0000033;8.71e-07;50|ontology_enrichment_uberon_v019_2=UBERON:0007625,5.71e-28,11;UBERON:0000019,5.06e-22,20;UBERON:0000047,5.06e-22,20;UBERON:0010312,5.06e-22,20;UBERON:0004088,5.06e-22,20;UBERON:0010230,5.06e-22,20;UBERON:0003072,5.06e-22,20;UBERON:0004128,5.06e-22,20;UBERON:0003071,5.06e-22,20;UBERON:0000970,5.80e-21,21;UBERON:0002104,5.80e-21,21;UBERON:0001456,5.32e-20,22;UBERON:0000966,1.71e-19,6;UBERON:0005388,1.71e-19,6;UBERON:0001802,1.71e-19,6;UBERON:0000020,2.59e-18,24;UBERON:0001032,2.59e-18,24;UBERON:0004456,2.59e-18,24;UBERON:0001782,1.28e-17,3;UBERON:0005424,1.28e-17,3;UBERON:0001778,1.94e-17,3;UBERON:0001775,1.94e-17,3;UBERON:0005085,4.06e-14,31;UBERON:0001781,1.83e-13,4;UBERON:0000488,2.51e-13,4;UBERON:0003056,5.40e-12,61;UBERON:0010371,1.13e-10,104;UBERON:0002203,3.42e-09,6;UBERON:0001768,3.42e-09,6;UBERON:0002200,3.42e-09,6;UBERON:0001444,8.22e-09,49;UBERON:0003075,9.46e-09,82;UBERON:0007284,9.46e-09,82;UBERON:0001801,1.74e-08,14;UBERON:0002346,2.61e-08,86;UBERON:0010314,4.06e-08,132;UBERON:0000033,1.15e-07,56;UBERON:0004121,2.87e-07,171;UBERON:0000924,2.87e-07,171;UBERON:0006601,2.87e-07,171;UBERON:0000153,6.94e-07,62;UBERON:0007811,6.94e-07,62|phase1_expression=0.363356758541113,0,0.140954404095971,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0.123121058076788,0,0,1.14494394852423,0.684372125364421,1.75759695432724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0.393010762749165,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0.12786256184353,0,0,0,0,0,1.32348744029695,0.443458794925128,1.40535657109002,0.196468613246569,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=83943 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14598 | |||
|TSSclassifier=S | |||
|UniProt=C9JQE1 | |||
|association_with_transcript=-26bp_to_ENST00000450877_5end | |||
|coexpression_cluster_id=C177 | |||
|description=CAGE_peak_6_at_IMMP2L_5end | |||
|id=chr7:111032997..111033020,- | |||
|ontology_enrichment_celltype=CL:0000149!7.56e-11!4;CL:0005020!7.21e-10!6;CL:0002138!7.21e-10!6;CL:0005022!7.21e-10!6;CL:0002605!9.93e-09!3;CL:0000064!1.24e-08!3;CL:0005012!1.24e-08!3;CL:0000067!1.24e-08!3;CL:0002304!1.24e-08!3;CL:0002586!1.60e-08!3;CL:0000147!4.12e-08!14;CL:0000325!1.17e-07!39 | |||
|ontology_enrichment_celltype_v019=CL:0000064;2.29e-17;3!CL:0000067;2.29e-17;3!CL:0005012;2.29e-17;3!CL:0002605;2.29e-17;3!CL:0002304;2.29e-17;3!CL:0002586;2.29e-17;3!CL:0000147;1.62e-14;14!CL:0000149;2.84e-13;4!CL:0000075;1.79e-11;27!CL:0000710;3.07e-10;20!CL:0000128;5.66e-08;7!CL:0000126;5.66e-08;7!CL:0000127;5.66e-08;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,1.28e-17,3;CL:0000064,1.94e-17,3;CL:0000067,1.94e-17,3;CL:0005012,1.94e-17,3;CL:0002304,1.94e-17,3;CL:0002605,2.11e-17,3;CL:0000147,1.27e-14,14;CL:0000149,1.83e-13,4;CL:0000075,1.85e-11,27;CL:0000710,2.92e-10,20;CL:0000133,2.17e-09,59;CL:0000128,5.47e-08,7;CL:0000126,5.47e-08,7;CL:0000127,5.47e-08,7;CL:0002453,5.47e-08,7;CL:0000221,1.24e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000133;8.30e-07;59 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;1.67e-26;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,1.67e-26,2 | |||
|ontology_enrichment_uberon=UBERON:0007625!5.18e-17!11;UBERON:0000970!4.86e-13!20;UBERON:0002104!2.72e-12!21;UBERON:0000019!2.35e-11!19;UBERON:0000047!2.35e-11!19;UBERON:0004088!2.35e-11!19;UBERON:0003072!2.35e-11!19;UBERON:0003071!2.35e-11!19;UBERON:0004128!2.35e-11!19;UBERON:0000020!5.42e-11!23;UBERON:0003075!1.16e-10!86;UBERON:0007284!1.16e-10!86;UBERON:0001032!2.00e-10!24;UBERON:0004456!2.00e-10!24;UBERON:0000488!2.05e-10!4;UBERON:0001456!4.68e-10!21;UBERON:0002346!6.54e-10!90;UBERON:0003056!3.10e-09!61;UBERON:0000966!8.82e-09!5;UBERON:0005388!8.82e-09!5;UBERON:0001802!8.82e-09!5;UBERON:0001778!1.24e-08!3;UBERON:0001775!1.24e-08!3;UBERON:0001781!1.60e-08!3;UBERON:0001782!1.60e-08!3;UBERON:0005424!1.60e-08!3;UBERON:0005085!5.56e-08!29;UBERON:0006947!6.36e-08!3;UBERON:0004054!6.36e-08!3;UBERON:0001473!2.70e-07!8;UBERON:0004536!2.70e-07!8;UBERON:0006558!2.70e-07!8;UBERON:0004121!3.38e-07!169;UBERON:0002203!6.56e-07!6;UBERON:0001768!6.56e-07!6;UBERON:0000924!7.40e-07!173;UBERON:0006601!7.40e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0007625;7.77e-28;11!UBERON:0000019;4.24e-23;19!UBERON:0000047;4.24e-23;19!UBERON:0004088;4.24e-23;19!UBERON:0010230;4.24e-23;19!UBERON:0000966;5.06e-23;5!UBERON:0005388;5.06e-23;5!UBERON:0001802;5.06e-23;5!UBERON:0000970;6.19e-22;20!UBERON:0002104;7.02e-21;21!UBERON:0001456;7.02e-21;21!UBERON:0000020;4.81e-19;23!UBERON:0010371;1.08e-18;31!UBERON:0001032;3.06e-18;24!UBERON:0004456;3.06e-18;24!UBERON:0001781;2.29e-17;3!UBERON:0001778;2.29e-17;3!UBERON:0001782;2.29e-17;3!UBERON:0001775;2.29e-17;3!UBERON:0000488;2.84e-13;4!UBERON:0002203;3.71e-09;6!UBERON:0001768;3.71e-09;6!UBERON:0002200;3.71e-09;6!UBERON:0001801;1.68e-08;14!UBERON:0001444;7.30e-08;48!UBERON:0000033;8.71e-07;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007625,5.71e-28,11;UBERON:0000019,5.06e-22,20;UBERON:0000047,5.06e-22,20;UBERON:0010312,5.06e-22,20;UBERON:0004088,5.06e-22,20;UBERON:0010230,5.06e-22,20;UBERON:0003072,5.06e-22,20;UBERON:0004128,5.06e-22,20;UBERON:0003071,5.06e-22,20;UBERON:0000970,5.80e-21,21;UBERON:0002104,5.80e-21,21;UBERON:0001456,5.32e-20,22;UBERON:0000966,1.71e-19,6;UBERON:0005388,1.71e-19,6;UBERON:0001802,1.71e-19,6;UBERON:0000020,2.59e-18,24;UBERON:0001032,2.59e-18,24;UBERON:0004456,2.59e-18,24;UBERON:0001782,1.28e-17,3;UBERON:0005424,1.28e-17,3;UBERON:0001778,1.94e-17,3;UBERON:0001775,1.94e-17,3;UBERON:0005085,4.06e-14,31;UBERON:0001781,1.83e-13,4;UBERON:0000488,2.51e-13,4;UBERON:0003056,5.40e-12,61;UBERON:0010371,1.13e-10,104;UBERON:0002203,3.42e-09,6;UBERON:0001768,3.42e-09,6;UBERON:0002200,3.42e-09,6;UBERON:0001444,8.22e-09,49;UBERON:0003075,9.46e-09,82;UBERON:0007284,9.46e-09,82;UBERON:0001801,1.74e-08,14;UBERON:0002346,2.61e-08,86;UBERON:0010314,4.06e-08,132;UBERON:0000033,1.15e-07,56;UBERON:0004121,2.87e-07,171;UBERON:0000924,2.87e-07,171;UBERON:0006601,2.87e-07,171;UBERON:0000153,6.94e-07,62;UBERON:0007811,6.94e-07,62 | |||
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|short_description=p6@IMMP2L | |||
}} |
Revision as of 22:44, 13 September 2013
Short description: | p6@IMMP2L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_IMMP2L_5end |
Coexpression cluster: | C177_melanoma_Melanocyte_mesenchymal_retina_Mallassezderived_Gingival_squamous |
Association with transcript: | -26bp_to_ENST00000450877_5end |
EntrezGene: | IMMP2L |
HGNC: | 14598 |
UniProt: | C9JQE1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 1.28e-17 | 3 |
ciliated cell | 1.94e-17 | 3 |
ciliated epithelial cell | 1.94e-17 | 3 |
multi-ciliated epithelial cell | 1.94e-17 | 3 |
non-pigmented ciliary epithelial cell | 1.94e-17 | 3 |
astrocyte of the cerebral cortex | 2.11e-17 | 3 |
pigment cell | 1.27e-14 | 14 |
visual pigment cell | 1.83e-13 | 4 |
columnar/cuboidal epithelial cell | 1.85e-11 | 27 |
neurecto-epithelial cell | 2.92e-10 | 20 |
neurectodermal cell | 2.17e-09 | 59 |
oligodendrocyte | 5.47e-08 | 7 |
macroglial cell | 5.47e-08 | 7 |
astrocyte | 5.47e-08 | 7 |
oligodendrocyte precursor cell | 5.47e-08 | 7 |
ectodermal cell | 1.24e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
melanoma | 1.67e-26 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.