FFCP PHASE1:Hg19::chr7:131195804..131195897,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C1090|description=CAGE_peak_at_chr7:131195804..131195897,+|id=chr7:131195804..131195897,+|ontology_enrichment_celltype=CL:0002139!2.12e-10!24;CL:0000213!2.07e-09!57;CL:0000215!2.07e-09!57;CL:0000071!1.37e-07!18;CL:0002546!1.37e-07!18;CL:0000066!1.56e-07!254;CL:0002078!8.57e-07!44|ontology_enrichment_celltype_v019=CL:0002139;7.99e-10;24!CL:0002322;1.52e-07;5!CL:0000115;2.65e-07;36|ontology_enrichment_celltype_v019_2=CL:0002139,7.09e-10,24;CL:0000213,7.63e-10,58;CL:0000215,7.63e-10,58;CL:0000115,8.07e-08,36;CL:0002078,1.14e-07,45;CL:0002322,1.56e-07,5|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:305!3.14e-08!106|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.02e-12!115;UBERON:0005743!1.53e-11!86;UBERON:0001017!3.40e-11!82;UBERON:0000073!4.51e-10!94;UBERON:0001016!4.51e-10!94;UBERON:0000955!2.25e-09!69;UBERON:0006238!2.25e-09!69;UBERON:0001049!2.40e-09!57;UBERON:0005068!2.40e-09!57;UBERON:0006241!2.40e-09!57;UBERON:0007135!2.40e-09!57;UBERON:0002020!6.31e-08!34;UBERON:0003528!6.31e-08!34;UBERON:0003075!7.25e-08!86;UBERON:0007284!7.25e-08!86;UBERON:0002616!1.25e-07!59;UBERON:0001893!1.37e-07!34;UBERON:0001986!1.37e-07!18;UBERON:0004638!1.37e-07!18;UBERON:0004852!1.37e-07!18;UBERON:0000477!1.63e-07!286;UBERON:0003080!1.97e-07!42;UBERON:0000025!2.54e-07!194;UBERON:0002791!2.88e-07!33;UBERON:0002780!3.13e-07!41;UBERON:0001890!3.13e-07!41;UBERON:0006240!3.13e-07!41;UBERON:0002346!4.00e-07!90;UBERON:0001869!5.13e-07!32|ontology_enrichment_uberon_v019=UBERON:0001737;1.47e-07;9!UBERON:0001557;1.47e-07;9|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.46e-09,81;UBERON:0001737,5.94e-08,9;UBERON:0001016,7.41e-08,89;UBERON:0000955,1.14e-07,68;UBERON:0006238,1.14e-07,68;UBERON:0001049,1.46e-07,56;UBERON:0005068,1.46e-07,56;UBERON:0006241,1.46e-07,56;UBERON:0007135,1.46e-07,56;UBERON:0003528,3.31e-07,34;UBERON:0002020,3.31e-07,34;UBERON:0000073,6.28e-07,53;UBERON:0002616,6.28e-07,53|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0.872338524100369,0,0,0,0,0,4.58726881473362,6.33040747748289,0,0,0,0.602694528023977,0,0,0,0,1.56727360739044,2.86235987131057,0.821246550437305,6.77930253811935,0,0.164201178899891,0.0787107813136792,0,0,0,0,0,0,0.0774672005803016,1.42169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.722878304769133,0,0,0,0,0.0945348171640679,0.221729397462564,0.351339142772504,1.70272798147026,0,0,0.649094787309367,0.174129737299267,0,0,0,0,0.993812036833525,3.4409383804245,6.94281003215189,1.69592382577203,4.19499436209906,4.67700671298115,0.626984899610432,3.35941786920128,1.06729878806013,0.33472061276467,7.25092770796465,0.760272105718513,15.6199716830828,0.367663080345869,6.48113558305408,0.357198913136319,1.12264686313085,1.91439516821648,0,0.949265659568129,2.93122790288652,0,0,0.436094052142534,1.49091585508596,0,0,2.29469296599051,0.354668382198357,0,0,0,0,0.404132016209064,0,0,0,0,0,0.570471821544449,0.448346041655403,0.117434498643765,0.971237666208789,0.421352420106746,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453728732640084,20.2710288328414,0,0.423863802319124,12.0036438433761,0.309157587715317,1.03056216018252,0.37223371266318,20.4219362011932,1.26668106709558,4.03894038790583,0.0920498986422993,0.161646056818812,8.52023022039874,2.11579406278045,0.67824236924195,0.386521706326594,0,0,8.41618572294208,6.36142887943129,8.48215782947484,4.87206958572241,8.07426722802011,12.0442528495024,0,0,0,0,0,1.53798840051797,2.19160097101532,1.20505514941741,1.8749975364507,1.96091499683166,1.66089433377768,1.48314438976181,2.5508790466295,1.53898862778556,0.738155454624648,0,0.8231480226628,0,0,0,0.590789906681404,0,1.35287282397425,0,0,0,0,0,0,0,0,0.927443239800615,0,6.0633908059651,11.5746378144153,11.2249949818413,0,0.858486162094873,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22001485746285,0.129271715757778,0,1.690605505112,0.26593811658487,2.08014873822732,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0.699810938274399,0,0,0,0,0,1.42636905040718,0.579125226670317,0.61642896765115,1.61154866915906,0.336255431980582,0,0.215627574859517,0.128343036279748,0,0,0.773288812777695,0.167516265334349,1.27587750330633,0,0,0,0,0,0,0.207970861530807,0,0.157702415033935,0.117141414992713,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0.606255142892519,0,0.30239029332968,0,2.30192959932094,0.280660094433074,0,0.511707249066704,0.160853921143607,5.93672265779964,0,0.177561725313127,0.657017248110473,0,1.62694529843943,1.0877350463246,0,0,0,0,0,1.35359883872224,0.462092022626489,2.35304930753057,0,0.316654886678627,2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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1090 | |||
|description=CAGE_peak_at_chr7:131195804..131195897,+ | |||
|id=chr7:131195804..131195897,+ | |||
|ontology_enrichment_celltype=CL:0002139!2.12e-10!24;CL:0000213!2.07e-09!57;CL:0000215!2.07e-09!57;CL:0000071!1.37e-07!18;CL:0002546!1.37e-07!18;CL:0000066!1.56e-07!254;CL:0002078!8.57e-07!44 | |||
|ontology_enrichment_celltype_v019=CL:0002139;7.99e-10;24!CL:0002322;1.52e-07;5!CL:0000115;2.65e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,7.09e-10,24;CL:0000213,7.63e-10,58;CL:0000215,7.63e-10,58;CL:0000115,8.07e-08,36;CL:0002078,1.14e-07,45;CL:0002322,1.56e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!3.14e-08!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.02e-12!115;UBERON:0005743!1.53e-11!86;UBERON:0001017!3.40e-11!82;UBERON:0000073!4.51e-10!94;UBERON:0001016!4.51e-10!94;UBERON:0000955!2.25e-09!69;UBERON:0006238!2.25e-09!69;UBERON:0001049!2.40e-09!57;UBERON:0005068!2.40e-09!57;UBERON:0006241!2.40e-09!57;UBERON:0007135!2.40e-09!57;UBERON:0002020!6.31e-08!34;UBERON:0003528!6.31e-08!34;UBERON:0003075!7.25e-08!86;UBERON:0007284!7.25e-08!86;UBERON:0002616!1.25e-07!59;UBERON:0001893!1.37e-07!34;UBERON:0001986!1.37e-07!18;UBERON:0004638!1.37e-07!18;UBERON:0004852!1.37e-07!18;UBERON:0000477!1.63e-07!286;UBERON:0003080!1.97e-07!42;UBERON:0000025!2.54e-07!194;UBERON:0002791!2.88e-07!33;UBERON:0002780!3.13e-07!41;UBERON:0001890!3.13e-07!41;UBERON:0006240!3.13e-07!41;UBERON:0002346!4.00e-07!90;UBERON:0001869!5.13e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.47e-07;9!UBERON:0001557;1.47e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.46e-09,81;UBERON:0001737,5.94e-08,9;UBERON:0001016,7.41e-08,89;UBERON:0000955,1.14e-07,68;UBERON:0006238,1.14e-07,68;UBERON:0001049,1.46e-07,56;UBERON:0005068,1.46e-07,56;UBERON:0006241,1.46e-07,56;UBERON:0007135,1.46e-07,56;UBERON:0003528,3.31e-07,34;UBERON:0002020,3.31e-07,34;UBERON:0000073,6.28e-07,53;UBERON:0002616,6.28e-07,53 | |||
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| |||
|short_description=p@chr7:131195804..131195897,+ | |||
}} |
Revision as of 23:18, 13 September 2013
Short description: | p@chr7:131195804..131195897, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:131195804..131195897, + |
Coexpression cluster: | C1090_teratocarcinoma_Fibroblast_glioblastoma_kidney_H9_iPS_Amniotic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 7.09e-10 | 24 |
lining cell | 7.63e-10 | 58 |
barrier cell | 7.63e-10 | 58 |
endothelial cell | 8.07e-08 | 36 |
meso-epithelial cell | 1.14e-07 | 45 |
embryonic stem cell | 1.56e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 3.46e-09 | 81 |
larynx | 5.94e-08 | 9 |
nervous system | 7.41e-08 | 89 |
brain | 1.14e-07 | 68 |
future brain | 1.14e-07 | 68 |
neural tube | 1.46e-07 | 56 |
neural rod | 1.46e-07 | 56 |
future spinal cord | 1.46e-07 | 56 |
neural keel | 1.46e-07 | 56 |
brain grey matter | 3.31e-07 | 34 |
gray matter | 3.31e-07 | 34 |
regional part of nervous system | 6.28e-07 | 53 |
regional part of brain | 6.28e-07 | 53 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.