FFCP PHASE1:Hg19::chr7:137308..137321,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C166|description=CAGE_peak_at_chr7:137308..137321,+|id=chr7:137308..137321,+|ontology_enrichment_celltype=CL:0000990!2.13e-41!8;CL:0000451!9.37e-34!10;CL:0000235!2.77e-28!10;CL:0000453!1.74e-24!5;CL:0002009!7.63e-24!65;CL:0000557!1.26e-21!71;CL:0002194!2.20e-21!63;CL:0000576!2.20e-21!63;CL:0000040!2.20e-21!63;CL:0000559!2.20e-21!63;CL:0000840!2.26e-21!5;CL:0001029!2.26e-21!5;CL:0000839!5.06e-19!70;CL:0000763!5.64e-19!112;CL:0000049!5.64e-19!112;CL:0000766!2.43e-17!76;CL:0000738!1.89e-16!140;CL:0002032!1.90e-13!165;CL:0000837!1.90e-13!165;CL:0002031!5.03e-13!124;CL:0000037!9.22e-13!172;CL:0000566!9.22e-13!172;CL:0002087!6.93e-12!119;CL:0000988!7.14e-12!182|ontology_enrichment_celltype_v019=CL:0000235;3.04e-107;6!CL:0000840;8.52e-28;5!CL:0000990;8.67e-19;8!CL:0000451;1.68e-15;10!CL:0000473;2.98e-14;39!CL:0000234;2.98e-14;39|ontology_enrichment_celltype_v019_2=CL:0000235,3.04e-107,6;CL:0000840,8.52e-28,5;CL:0001029,8.52e-28,5;CL:0002194,7.76e-24,59;CL:0000576,7.76e-24,59;CL:0000040,7.76e-24,59;CL:0000559,7.76e-24,59;CL:0002009,4.71e-23,61;CL:0000839,2.67e-21,66;CL:0000557,5.58e-21,67;CL:0000766,1.64e-19,72;CL:0000990,8.67e-19,8;CL:0000451,1.68e-15,10;CL:0002087,6.15e-15,115;CL:0002031,2.70e-14,120;CL:0000473,1.93e-13,48;CL:0000234,1.93e-13,48;CL:0000763,6.86e-13,108;CL:0000049,6.86e-13,108;CL:0000738,1.50e-12,136;CL:0002032,1.66e-10,161;CL:0000837,1.66e-10,161;CL:0000037,4.85e-10,168;CL:0000988,1.70e-09,177|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!6.44e-19!80;UBERON:0001474!2.02e-17!86;UBERON:0004765!1.88e-14!101;UBERON:0001434!1.88e-14!101;UBERON:0002390!2.77e-14!102;UBERON:0003061!2.77e-14!102;UBERON:0002193!8.97e-13!112;UBERON:0002405!2.27e-12!115;UBERON:0002204!3.12e-10!167;UBERON:0001154!4.91e-09!1;UBERON:0001153!4.91e-09!1|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.80e-18,76;UBERON:0001474,4.23e-17,82;UBERON:0004765,1.50e-15,90;UBERON:0002405,4.89e-15,93;UBERON:0002390,3.00e-14,98;UBERON:0003061,3.00e-14,98;UBERON:0001434,5.88e-14,100;UBERON:0002193,6.86e-13,108;UBERON:0002204,3.89e-08,167|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434377689410233,0,0,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.6046327144608,16.3681953061311,11.833258486179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.70838706696137,63.8831643830119,15.0117473911616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.64871341923571,1.50677127429638,33.7334303172851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,2.93016358543788,0,1.44876399560722,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.797189041880179,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18378979906969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr7:137308..137321,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C166 | |||
|description=CAGE_peak_at_chr7:137308..137321,+ | |||
|id=chr7:137308..137321,+ | |||
|ontology_enrichment_celltype=CL:0000990!2.13e-41!8;CL:0000451!9.37e-34!10;CL:0000235!2.77e-28!10;CL:0000453!1.74e-24!5;CL:0002009!7.63e-24!65;CL:0000557!1.26e-21!71;CL:0002194!2.20e-21!63;CL:0000576!2.20e-21!63;CL:0000040!2.20e-21!63;CL:0000559!2.20e-21!63;CL:0000840!2.26e-21!5;CL:0001029!2.26e-21!5;CL:0000839!5.06e-19!70;CL:0000763!5.64e-19!112;CL:0000049!5.64e-19!112;CL:0000766!2.43e-17!76;CL:0000738!1.89e-16!140;CL:0002032!1.90e-13!165;CL:0000837!1.90e-13!165;CL:0002031!5.03e-13!124;CL:0000037!9.22e-13!172;CL:0000566!9.22e-13!172;CL:0002087!6.93e-12!119;CL:0000988!7.14e-12!182 | |||
|ontology_enrichment_celltype_v019=CL:0000235;3.04e-107;6!CL:0000840;8.52e-28;5!CL:0000990;8.67e-19;8!CL:0000451;1.68e-15;10!CL:0000473;2.98e-14;39!CL:0000234;2.98e-14;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,3.04e-107,6;CL:0000840,8.52e-28,5;CL:0001029,8.52e-28,5;CL:0002194,7.76e-24,59;CL:0000576,7.76e-24,59;CL:0000040,7.76e-24,59;CL:0000559,7.76e-24,59;CL:0002009,4.71e-23,61;CL:0000839,2.67e-21,66;CL:0000557,5.58e-21,67;CL:0000766,1.64e-19,72;CL:0000990,8.67e-19,8;CL:0000451,1.68e-15,10;CL:0002087,6.15e-15,115;CL:0002031,2.70e-14,120;CL:0000473,1.93e-13,48;CL:0000234,1.93e-13,48;CL:0000763,6.86e-13,108;CL:0000049,6.86e-13,108;CL:0000738,1.50e-12,136;CL:0002032,1.66e-10,161;CL:0000837,1.66e-10,161;CL:0000037,4.85e-10,168;CL:0000988,1.70e-09,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!6.44e-19!80;UBERON:0001474!2.02e-17!86;UBERON:0004765!1.88e-14!101;UBERON:0001434!1.88e-14!101;UBERON:0002390!2.77e-14!102;UBERON:0003061!2.77e-14!102;UBERON:0002193!8.97e-13!112;UBERON:0002405!2.27e-12!115;UBERON:0002204!3.12e-10!167;UBERON:0001154!4.91e-09!1;UBERON:0001153!4.91e-09!1 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.80e-18,76;UBERON:0001474,4.23e-17,82;UBERON:0004765,1.50e-15,90;UBERON:0002405,4.89e-15,93;UBERON:0002390,3.00e-14,98;UBERON:0003061,3.00e-14,98;UBERON:0001434,5.88e-14,100;UBERON:0002193,6.86e-13,108;UBERON:0002204,3.89e-08,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434377689410233,0,0,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.6046327144608,16.3681953061311,11.833258486179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.70838706696137,63.8831643830119,15.0117473911616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.64871341923571,1.50677127429638,33.7334303172851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,2.93016358543788,0,1.44876399560722,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.797189041880179,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18378979906969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr7:137308..137321,+ | |||
}} |
Revision as of 23:26, 13 September 2013
Short description: | p@chr7:137308..137321, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:137308..137321, + |
Coexpression cluster: | C166_Macrophage_Monocytederived_Dendritic_adipose_lymph_CD14_lung |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 3.04e-107 | 6 |
immature conventional dendritic cell | 8.52e-28 | 5 |
common dendritic progenitor | 8.52e-28 | 5 |
monopoietic cell | 7.76e-24 | 59 |
monocyte | 7.76e-24 | 59 |
monoblast | 7.76e-24 | 59 |
promonocyte | 7.76e-24 | 59 |
macrophage dendritic cell progenitor | 4.71e-23 | 61 |
myeloid lineage restricted progenitor cell | 2.67e-21 | 66 |
granulocyte monocyte progenitor cell | 5.58e-21 | 67 |
myeloid leukocyte | 1.64e-19 | 72 |
conventional dendritic cell | 8.67e-19 | 8 |
dendritic cell | 1.68e-15 | 10 |
nongranular leukocyte | 6.15e-15 | 115 |
hematopoietic lineage restricted progenitor cell | 2.70e-14 | 120 |
defensive cell | 1.93e-13 | 48 |
phagocyte | 1.93e-13 | 48 |
myeloid cell | 6.86e-13 | 108 |
common myeloid progenitor | 6.86e-13 | 108 |
leukocyte | 1.50e-12 | 136 |
hematopoietic oligopotent progenitor cell | 1.66e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.66e-10 | 161 |
hematopoietic stem cell | 4.85e-10 | 168 |
hematopoietic cell | 1.70e-09 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.80e-18 | 76 |
bone element | 4.23e-17 | 82 |
skeletal element | 1.50e-15 | 90 |
immune system | 4.89e-15 | 93 |
hematopoietic system | 3.00e-14 | 98 |
blood island | 3.00e-14 | 98 |
skeletal system | 5.88e-14 | 100 |
hemolymphoid system | 6.86e-13 | 108 |
musculoskeletal system | 3.89e-08 | 167 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.