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FFCP PHASE1:Mm9::chr2:80421372..80421385,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=50884|HGNC=|MCL_coexpression_id=361|UniProt=P28660|association_with_transcript=35bp_to_ENSMUST00000028386_5end|description=CAGE_peak_5_at_Nckap1_5end|id=chr2:80421372..80421385,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!1.06e-10!102;UBERON:0000924!1.06e-10!102;UBERON:0006601!1.06e-10!102;UBERON:0000033!1.16e-09!63;UBERON:0002346!1.25e-09!71;UBERON:0003075!1.25e-09!71;UBERON:0007284!1.25e-09!71;UBERON:0000955!2.36e-08!50;UBERON:0006238!2.36e-08!50;UBERON:0002616!6.43e-08!49;UBERON:0000468!1.18e-07!333;UBERON:0000073!1.85e-07!75;UBERON:0001016!1.85e-07!75;UBERON:0001049!2.56e-07!52;UBERON:0005068!2.56e-07!52;UBERON:0006241!2.56e-07!52;UBERON:0007135!2.56e-07!52;UBERON:0002021!4.00e-07!10;UBERON:0000411!4.00e-07!10;UBERON:0001950!4.00e-07!10;UBERON:0001017!4.27e-07!73;UBERON:0005743!4.27e-07!73|ontology_enrichment_uberon_v019_2=UBERON:0010314,3.27e-11,92;UBERON:0004121,7.31e-09,95;UBERON:0000924,7.31e-09,95;UBERON:0006601,7.31e-09,95;UBERON:0010371,1.62e-08,73;UBERON:0000073,6.11e-08,54;UBERON:0002346,8.48e-08,64;UBERON:0003075,8.48e-08,64;UBERON:0007284,8.48e-08,64;UBERON:0001016,3.01e-07,75;UBERON:0002021,3.75e-07,10;UBERON:0000411,3.75e-07,10;UBERON:0001950,3.75e-07,10;UBERON:0001049,4.71e-07,52;UBERON:0005068,4.71e-07,52;UBERON:0006241,4.71e-07,52;UBERON:0007135,4.71e-07,52;UBERON:0001017,6.88e-07,73|phase1_expression=4.00372117761985,3.48975407639361,2.27499619694768,5.44435580352294,5.00895729946347,1.17515490338323,2.80335168714631,0.129123323441576,0.140788722151667,0,0,0.159544317990673,0,0.0874204024189974,0.333109761815663,0.607425802169478,0.699561878128147,0,0.137114433605739,0,4.16712121740242,0.0992909512008853,0,1.59992422793407,2.75291137280604,2.8711598205751,3.4460959692726,1.29282739611533,2.28028103347649,1.26015064879965,0.665191531965914,0,1.23012957516914,0,0.577703239502549,0.997407872150954,1.22501613757421,0,0,0,0,0,0,2.01434908760924,2.12891555560981,3.12029478674859,0.782391344348039,1.09012578190223,0.659058548203415,3.11087838518853,2.37976916763116,0,0,0,0,6.68874533693462,5.73066879877513,4.12537673821954,1.41621522601718,1.5869729378161,1.90149421051854,1.0165335962074,0,0.449949858640699,0,0,0.299600110518405,1.92109152660777,3.00699875694585,2.29510095163874,2.3135745748652,2.57085885963423,2.42955395046775,1.83736198822431,1.82106394934649,0.919218786610021,6.60695285996332,12.5133591323484,14.5926206593431,1.97829431595291,2.37867873366265,0.52091337055676,8.65467296904281,12.9435400307286,11.4598685832608,5.30331453852602,6.12198227436143,2.42319279572891,3.10477392666055,5.29000920747499,4.05810284182349,0.860423876981386,3.39985666853875,3.77792234146472,1.94932925234301,3.13618820968135,5.05599912474307,2.55645483867087,2.85764605063156,3.5333957451034,4.92951969218382,2.56652954828636,2.54805239706646,0,4.11332977921307,4.05375784760158,4.04419556011827,3.31133251185274,0.258937883647172,3.41416919849097,3.29622120855658,4.87144765299426,4.15107895060905,4.82312449768392,3.41007250693544,4.90099706185734,3.46072954828123,2.89198713839823,1.76922110389975,3.88240439873782,1.98757366614354,1.93950101254089,0,7.02673912827713,10.6817820474862,0.766371165625774,0,0,0,12.8819949888148,10.5225138648284,3.5183218591602,14.9488915365358,15.0872119824895,14.1295870300501,12.8170597823529,2.24046600470696,1.8661045591514,3.79084137650512,8.20723237957248,2.34216797332867,2.98872735763515,3.78130472591233,3.16480117455002,4.62648194229029,2.3060469651273,4.40398105430725,1.29351685369508,2.80238390812695,2.83659120251729,2.11141348996739,4.16471891612392,3.33656699070717,4.87553033131033,2.26360350048738,2.58744546864041,0,0,0,2.89976081549703,2.34526059981096,2.52086886045421,3.07768156260773,3.73852040320067,3.23960937063494,3.48800917125612,5.633741429392,4.32031766758527,3.78487654801005,2.79084688934462,3.40489000092594,1.75439984910399,1.3173006917463,2.28150911892632,15.1408762966172,9.05560588937703,3.96502539580558,3.17340679996253,1.49301775374664,2.32236671860439,3.47942145569652,4.03367049246685,3.11329261382818,2.85338439168839,1.42358718463353,1.64698954724011,2.01068167040216,2.18852119245266,4.874102177978,1.79763881730844,4.32276099749388,1.59313018603494,1.51734320762465,2.28497025219458,1.1270773567308,2.8511185898344,2.13347735884388,4.83937157243198,3.60448261608267,4.72352473534727,3.29697328466887,4.07210640941942,4.15033677922008,1.33476084572875,1.57247196090562,1.79889689907883,1.82574109249653,1.68824011826692,1.2731292589071,2.01387296215567,1.62135226775035,3.29473695825698,2.87536413054709,1.48856379067401,1.87222603868736,2.52578877947112,5.9201146462231,2.41221760681684,3.14080423283228,2.65287976478679,4.07412441105065,2.20668611507745,2.81628297946203,3.68513766371995,3.09456733151818,3.31727201358258,1.57635144106191,2.43611158613652,2.07291199254733,2.78567635016755,1.55416483679306,1.0125434100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|EntrezGene=50884
|HGNC=
|MCL_coexpression_id=361
|UniProt=P28660
|association_with_transcript=35bp_to_ENSMUST00000028386_5end
|description=CAGE_peak_5_at_Nckap1_5end
|id=chr2:80421372..80421385,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!1.06e-10!102;UBERON:0000924!1.06e-10!102;UBERON:0006601!1.06e-10!102;UBERON:0000033!1.16e-09!63;UBERON:0002346!1.25e-09!71;UBERON:0003075!1.25e-09!71;UBERON:0007284!1.25e-09!71;UBERON:0000955!2.36e-08!50;UBERON:0006238!2.36e-08!50;UBERON:0002616!6.43e-08!49;UBERON:0000468!1.18e-07!333;UBERON:0000073!1.85e-07!75;UBERON:0001016!1.85e-07!75;UBERON:0001049!2.56e-07!52;UBERON:0005068!2.56e-07!52;UBERON:0006241!2.56e-07!52;UBERON:0007135!2.56e-07!52;UBERON:0002021!4.00e-07!10;UBERON:0000411!4.00e-07!10;UBERON:0001950!4.00e-07!10;UBERON:0001017!4.27e-07!73;UBERON:0005743!4.27e-07!73
|ontology_enrichment_uberon_v019_2=UBERON:0010314,3.27e-11,92;UBERON:0004121,7.31e-09,95;UBERON:0000924,7.31e-09,95;UBERON:0006601,7.31e-09,95;UBERON:0010371,1.62e-08,73;UBERON:0000073,6.11e-08,54;UBERON:0002346,8.48e-08,64;UBERON:0003075,8.48e-08,64;UBERON:0007284,8.48e-08,64;UBERON:0001016,3.01e-07,75;UBERON:0002021,3.75e-07,10;UBERON:0000411,3.75e-07,10;UBERON:0001950,3.75e-07,10;UBERON:0001049,4.71e-07,52;UBERON:0005068,4.71e-07,52;UBERON:0006241,4.71e-07,52;UBERON:0007135,4.71e-07,52;UBERON:0001017,6.88e-07,73
|phase1_expression=4.00372117761985,3.48975407639361,2.27499619694768,5.44435580352294,5.00895729946347,1.17515490338323,2.80335168714631,0.129123323441576,0.140788722151667,0,0,0.159544317990673,0,0.0874204024189974,0.333109761815663,0.607425802169478,0.699561878128147,0,0.137114433605739,0,4.16712121740242,0.0992909512008853,0,1.59992422793407,2.75291137280604,2.8711598205751,3.4460959692726,1.29282739611533,2.28028103347649,1.26015064879965,0.665191531965914,0,1.23012957516914,0,0.577703239502549,0.997407872150954,1.22501613757421,0,0,0,0,0,0,2.01434908760924,2.12891555560981,3.12029478674859,0.782391344348039,1.09012578190223,0.659058548203415,3.11087838518853,2.37976916763116,0,0,0,0,6.68874533693462,5.73066879877513,4.12537673821954,1.41621522601718,1.5869729378161,1.90149421051854,1.0165335962074,0,0.449949858640699,0,0,0.299600110518405,1.92109152660777,3.00699875694585,2.29510095163874,2.3135745748652,2.57085885963423,2.42955395046775,1.83736198822431,1.82106394934649,0.919218786610021,6.60695285996332,12.5133591323484,14.5926206593431,1.97829431595291,2.37867873366265,0.52091337055676,8.65467296904281,12.9435400307286,11.4598685832608,5.30331453852602,6.12198227436143,2.42319279572891,3.10477392666055,5.29000920747499,4.05810284182349,0.860423876981386,3.39985666853875,3.77792234146472,1.94932925234301,3.13618820968135,5.05599912474307,2.55645483867087,2.85764605063156,3.5333957451034,4.92951969218382,2.56652954828636,2.54805239706646,0,4.11332977921307,4.05375784760158,4.04419556011827,3.31133251185274,0.258937883647172,3.41416919849097,3.29622120855658,4.87144765299426,4.15107895060905,4.82312449768392,3.41007250693544,4.90099706185734,3.46072954828123,2.89198713839823,1.76922110389975,3.88240439873782,1.98757366614354,1.93950101254089,0,7.02673912827713,10.6817820474862,0.766371165625774,0,0,0,12.8819949888148,10.5225138648284,3.5183218591602,14.9488915365358,15.0872119824895,14.1295870300501,12.8170597823529,2.24046600470696,1.8661045591514,3.79084137650512,8.20723237957248,2.34216797332867,2.98872735763515,3.78130472591233,3.16480117455002,4.62648194229029,2.3060469651273,4.40398105430725,1.29351685369508,2.80238390812695,2.83659120251729,2.11141348996739,4.16471891612392,3.33656699070717,4.87553033131033,2.26360350048738,2.58744546864041,0,0,0,2.89976081549703,2.34526059981096,2.52086886045421,3.07768156260773,3.73852040320067,3.23960937063494,3.48800917125612,5.633741429392,4.32031766758527,3.78487654801005,2.79084688934462,3.40489000092594,1.75439984910399,1.3173006917463,2.28150911892632,15.1408762966172,9.05560588937703,3.96502539580558,3.17340679996253,1.49301775374664,2.32236671860439,3.47942145569652,4.03367049246685,3.11329261382818,2.85338439168839,1.42358718463353,1.64698954724011,2.01068167040216,2.18852119245266,4.874102177978,1.79763881730844,4.32276099749388,1.59313018603494,1.51734320762465,2.28497025219458,1.1270773567308,2.8511185898344,2.13347735884388,4.83937157243198,3.60448261608267,4.72352473534727,3.29697328466887,4.07210640941942,4.15033677922008,1.33476084572875,1.57247196090562,1.79889689907883,1.82574109249653,1.68824011826692,1.2731292589071,2.01387296215567,1.62135226775035,3.29473695825698,2.87536413054709,1.48856379067401,1.87222603868736,2.52578877947112,5.9201146462231,2.41221760681684,3.14080423283228,2.65287976478679,4.07412441105065,2.20668611507745,2.81628297946203,3.68513766371995,3.09456733151818,3.31727201358258,1.57635144106191,2.43611158613652,2.07291199254733,2.78567635016755,1.55416483679306,1.01254341007058,0,0,1.96705709207614,3.03530420935206,14.7706542788769,13.4793439581034,3.93443868904021,2.27223834483936,3.15508219416257,3.90438744296638,3.44677436372478,3.58453196928828,2.89638276307112,1.41538265394416,4.04810701674894,1.75353514746787,5.13874111330481,7.39039027770156,2.83880170416537,1.42452482933804,2.93196526836437,3.46437258242324,2.65490276679926,2.18502572539483,3.02323556964751,3.20628635585027,2.36241514304618,5.53383266299069,3.6179961043551,2.54473610634254,2.49548164869305,3.47640433729398,2.10837217149998,5.15677716240934,3.74483566329167,2.70091641046965,1.03486947026204,2.35770738534752,3.54680467284547,1.60531935841864,3.78462747384878,1.8267896946876,2.3467170806371,4.02480934641258,3.30792597082443,3.2977250588296,3.39075296061402,3.19658502119226,5.01363844813173,2.46211349617592,1.7488850197791,12.4234952347041,0.683483523191411,2.06386867963222,0.925972636848558,0.188368457004691,0.136694227721025,0.228778173206523,0,0.139951452323658,0,4.77335309007557,3.95419991976419,2.84647253977588,3.45617090629764,2.09088296014469,2.40198820120795,2.29269388854195,2.89287095038676,2.35580347785627,1.94422459937689,4.97071450469541,2.25477175473676,3.43888055901151,3.80554528051325,2.91676782516071,2.45403664607689,2.87225413334323,3.28600268208111,3.51551839078665,4.29923312145414,2.41584120826006,1.15212002503146,0,2.02725215290164,0.718976700153791,1.55904987573354,1.07416017400489,0.79472541912506,0.961563596159751,1.32920574457119,0.605798699688886,0.609654453239999,0.403304740547362,0.38983152295901,0.577271049841977,0.233753804363138,3.17422537061296,3.99574716073316,2.06341870201794,4.19711540910196,2.89784391048286,5.2551093126331,1.83151624267265,3.21552568618599,5.01572104035363,11.2950368523413,7.36520378411483,9.73922372846974,5.15559547031063,10.2762377965596,7.55393897389701,10.8003600037089,9.45674526770863,10.4222754066367,13.9795284172991,4.15149390336707,5.1873233542134,3.07320490357441,1.45864030240976,2.72497111416377,4.22840069435032,2.00022055021454,4.94484137373346,3.20919209591815,3.53776096469316,5.0695859978048,4.14977951049368,3.83930180626518,3.71345883948242,3.15895079255873,5.23923060411381,3.01299247456624,3.6652751888104,2.47251540481984,4.12156976376312,3.08582327146874,3.01708870470874,2.86123427936785,3.0522747492789,3.48204707536723,2.876896668317,3.29270351170991,3.15683653725411,3.12349461845482,2.24456908663095,4.03359061622192,4.13718825977367,4.50154147486658,3.25367366490529,3.85813221962283,3.2475375131933,3.27504251823572,3.22306581072447,3.82576664137687,1.76473135295612,4.63735671240843
|short_description=p5@Nckap1
}}

Revision as of 00:44, 14 September 2013

Short description:p5@Nckap1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Nckap1_5end
Coexpression cluster:MCL_coexpression_mm9:361
Association with transcript: 35bp_to_ENSMUST00000028386_5end
EntrezGene:Nckap1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Nckap1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I53.49
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I62.27
CD326+ enterocyte, pool1.CNhs13542.11848-124I35.44
CD326+ enterocyte, pool2.CNhs13197.11849-124I45.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.18
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.80
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.16
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.61
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.17
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.60
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.75
GP2+ M cell, pool1.CNhs13228.11845-124H92.87
GP2+ M cell, pool2.CNhs13231.11846-124I13.45
GP2+ M cell, pool3.CNhs13240.11847-124I21.29
Ileum epithelium, pool1.CNhs13199.10252-104B92.28
Ileum epithelium, pool2.CNhs13232.10253-104C11.26
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.67
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.23
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.01
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.13
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B33.12
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.09
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.11
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.38
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C16.69
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E15.73
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C54.13
Mouse Granule cells, donor1.CNhs12131.11713-123C31.42
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E81.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.01
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.30
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.31
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.43
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.84
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.82
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F312.51
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D714.59
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.98
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.38
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E48.65
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E512.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I611.46
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.30
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F66.12
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.42
Mouse Schwann, donor1.CNhs12507.11728-123D93.10
Mouse Schwann, donor2.CNhs12573.11746-123F95.29
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.06
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C43.40
Mouse hepatocyte, donor3.CNhs12615.11637-122C83.78
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.95
Mouse hepatocyte, donor8.CNhs13091.11824-124F63.14
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A75.06
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.86
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I83.53
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G64.93
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G14.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G24.05
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G34.04
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.31
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D73.41
adrenal gland, embryo E14.CNhs11038.406-44C53.30
adrenal gland, embryo E16.CNhs11004.1254-43D64.87
adrenal gland, embryo E17.CNhs11043.1263-45I14.15
adrenal gland, embryo E18.CNhs11026.1262-18F54.82
adrenal gland, neonate N00.CNhs11191.1311-23C13.41
adrenal gland, neonate N25.CNhs11223.1377-27I34.90
amnion, adult pregnant day17.5.CNhs10488.583-22A83.46
aorta, adult.CNhs10498.46-23H12.89
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F53.88
bone (os femoris), neonate N16.CNhs11225.1525-43A61.99
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B27.03
cerebellum, neonate N30.CNhs11135.1395-42I210.68
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A412.88
corpus striatum, adult.CNhs10487.19-21D810.52
corpus striatum, neonate N00.CNhs11226.630-43F13.52
cortex, adult.CNhs10473.12-14D514.95
cortex, neonate N30.CNhs11107.1392-42F215.09
diencephalon, adult.CNhs10482.20-12F214.13
diencephalon, neonate N30.CNhs11201.1388-42B212.82
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.24
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.87
epididymis, adult.CNhs10490.58-23B23.79
eyeball, adult.CNhs10484.31-12G48.21
eyeball, embryo E12.CNhs11016.345-16C62.34
eyeball, embryo E14.CNhs10521.399-16E22.99
eyeball, embryo E15.CNhs10593.426-16C93.78
eyeball, embryo E17.CNhs11023.1261-18D43.16
eyeball, neonate N00.CNhs11207.633-15C64.63
eyeball, neonate N01.CNhs11140.1532-43E72.31
eyeball, neonate N02.CNhs11205.1551-44G84.40
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E22.80
forelimb, embryo E12.CNhs10600.359-14H22.84
forelimb, embryo E13.CNhs10589.384-1E22.11
forelimb, embryo E14.CNhs10577.413-26A84.16
forelimb, embryo E15.CNhs11007.437-20E73.34
forelimb, embryo E17.CNhs10598.1517-43C44.88
forelimb, embryo E18.CNhs11008.1520-43B52.26
gonad, embryo E13.CNhs11044.1564-45I62.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E92.90
heart, embryo E12.CNhs11015.353-12F52.35
heart, embryo E13.CNhs11013.376-3I92.52
heart, embryo E14.CNhs10597.403-26D43.08
heart, embryo E15.CNhs11017.431-16C83.74
heart, embryo E16.CNhs11021.457-17C63.24
heart, embryo E17.CNhs11025.479-18E53.49
heart, embryo E18.CNhs11030.1283-20G35.63
heart, neonate N00.CNhs11213.639-21E34.32
heart, neonate N03.CNhs11221.1349-25I23.78
heart, neonate N10.CNhs11118.749-24G12.79
heart, neonate N16.CNhs11209.782-15G13.40
heart, neonate N20.CNhs11127.821-26I61.75
heart, neonate N25.CNhs11196.1351-25D31.32
heart, neonate N30.CNhs11202.1390-42D22.28
hippocampus, adult.CNhs10478.13-16E815.14
hippocampus, neonate N00.CNhs11228.627-43G19.06
intestinal mucosa, adult.CNhs10506.860-29I33.97
intestine, adult.CNhs10496.178-9A33.17
intestine, embryo E12.CNhs11019.1251-16I51.49
intestine, embryo E13.CNhs11010.381-16D52.32
intestine, embryo E15.CNhs10602.976-16D83.48
intestine, embryo E16.CNhs10585.463-22H44.03
intestine, embryo E17.CNhs10582.482-18D33.11
intestine, embryo E18.CNhs10526.1289-20F72.85
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E91.65
intestine, neonate N06.CNhs11102.688-20B82.01
intestine, neonate N07.CNhs11095.720-20F22.19
intestine, neonate N10.CNhs11098.755-23A54.87
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E34.32
intestine, neonate N30.CNhs11131.1384-42G11.59
kidney, embryo E14.CNhs10606.411-4I91.52
kidney, embryo E15.CNhs10997.434-16F82.28
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I22.85
kidney, embryo E18.CNhs11001.1288-20C72.13
kidney, neonate N00.CNhs11214.646-21G74.84
kidney, neonate N10.CNhs11206.758-6D53.60
kidney, neonate N20.CNhs11113.832-19I14.72
kidney, neonate N25.CNhs11122.1353-25F33.30
kidney, neonate N30.CNhs11203.1385-42H14.07
liver, adult pregnant day01.CNhs10466.508-5B24.15
liver, embryo E12.CNhs10601.355-15F81.33
liver, embryo E13.CNhs10524.378-3H61.57
liver, embryo E14.CNhs10594.409-16E11.80
liver, embryo E15.CNhs10520.433-16D71.83
liver, embryo E16.CNhs10523.462-17F51.69
liver, embryo E17.CNhs10510.481-18A31.27
liver, embryo E18.CNhs10579.499-43G42.01
liver, neonate N00.CNhs11117.641-24F41.62
liver, neonate N03.CNhs11123.1345-25G23.29
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H21.49
liver, neonate N10.CNhs11115.751-24B91.87
liver, neonate N20.CNhs11220.823-25A32.53
liver, neonate N25.CNhs11198.1368-26H15.92
liver, neonate N30.CNhs11106.1382-42D12.41
lung, adult.CNhs10474.28-22B13.14
lung, embryo E12.CNhs10522.354-16G22.65
lung, embryo E14.CNhs10604.404-26F84.07
lung, embryo E15.CNhs11020.432-17C52.21
lung, embryo E16.CNhs10998.458-17B62.82
lung, embryo E17.CNhs10605.480-44A63.69
lung, embryo E18.CNhs10583.1287-20I63.09
lung, neonate N00.CNhs11224.640-42C63.32
lung, neonate N06.CNhs11212.683-20E51.58
lung, neonate N07.CNhs11111.715-19A32.44
lung, neonate N10.CNhs11219.750-23E62.07
lung, neonate N20.CNhs11109.822-18A42.79
lung, neonate N25.CNhs11119.1359-25C71.55
lung, neonate N30.CNhs11133.1394-42H21.01
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B61.97
mammary gland, adult pregnant day19.CNhs10476.588-5H23.04
medulla oblongata, adult.CNhs10477.17-12C214.77
medulla oblongata, neonate N30.CNhs11200.1396-42A313.48
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C73.93
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.27
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.16
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.90
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.45
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D73.58
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.90
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.42
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.05
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.75
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D65.14
olfactory brain, adult.CNhs10489.18-22I97.39
ovary, adult.CNhs10507.91-2I72.84
ovary, embryo E18.CNhs11040.505-44H71.42
ovary, neonate N00.CNhs11217.1299-22I42.93
oviduct, adult pregnant day01.CNhs10500.988-6G63.46
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F42.19
pancreas, embryo E15.CNhs11042.1556-45F23.02
pancreas, embryo E16.CNhs11003.460-26E53.21
pancreas, embryo E17.CNhs10599.1558-45G32.36
pancreas, embryo E18.CNhs10580.1535-43I75.53
pancreas, neonate N00.CNhs11105.645-26G93.62
pancreas, neonate N01.CNhs11138.1531-43D72.54
pancreas, neonate N02.CNhs11139.1539-43D82.50
pancreas, neonate N16.CNhs11136.787-43B63.48
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H55.16
pituitary gland, adult.CNhs10493.21-1G83.74
pituitary gland, embryo E12.CNhs11018.346-16E62.70
pituitary gland, embryo E13.CNhs11009.370-44C71.03
pituitary gland, embryo E14.CNhs11037.398-44A52.36
pituitary gland, embryo E15.CNhs10592.427-16B93.55
pituitary gland, embryo E16.CNhs11036.449-43F61.61
pituitary gland, embryo E17.CNhs11039.1265-44F53.78
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I72.35
placenta, adult pregnant day17.CNhs10464.577-18G34.02
prostate, adult.CNhs10470.859-1F83.31
skin, adult.CNhs10492.30-1C33.30
skin, neonate N00.CNhs11124.650-25G43.39
skin, neonate N03.CNhs11215.662-22H33.20
skin, neonate N06.CNhs11097.693-20I55.01
skin, neonate N10.CNhs11108.762-6C42.46
small intestine, neonate N16.CNhs11114.790-21I11.75
spinal cord, adult.CNhs10505.24-13C912.42
spleen, adult.CNhs10465.25-2G20.68
spleen, embryo E16.CNhs11035.461-43C12.06
spleen, embryo E18.CNhs11011.1271-21F20.93
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H64.77
stomach, embryo E12.CNhs10588.356-43E33.95
stomach, embryo E15.CNhs10603.1252-16G82.85
stomach, embryo E16.CNhs11022.459-17D43.46
stomach, embryo E17.CNhs11006.1035-18D52.09
stomach, embryo E18.CNhs10999.1286-20C62.40
stomach, neonate N03.CNhs11193.1340-24B82.29
stomach, neonate N07.CNhs11210.718-18A92.89
stomach, neonate N25.CNhs11104.1355-25E42.36
stomach, neonate N30.CNhs11134.1386-42I11.94
submandibular gland, adult.CNhs10469.59-29C14.97
testis, adult.CNhs10504.57-7G52.25
testis, embryo E13.CNhs11031.389-23F53.44
testis, embryo E15.CNhs11034.443-27C53.81
testis, embryo E16.CNhs11033.470-26G52.92
testis, embryo E17.CNhs11029.486-18I52.45
testis, embryo E18.CNhs11027.503-18G52.87
testis, neonate N00.CNhs11189.1300-22B73.29
testis, neonate N07.CNhs11222.726-26I43.52
testis, neonate N10.CNhs11204.763-44D94.30
testis, neonate N20.CNhs11110.839-18H32.42
testis, neonate N30.CNhs11130.1391-42E21.15
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I42.03
thymus, embryo E15.CNhs11005.430-45I20.72
thymus, embryo E16.CNhs11002.456-26C51.56
thymus, embryo E17.CNhs10581.478-18C11.07
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F80.96
thymus, neonate N03.CNhs11137.2104-43C71.33
thymus, neonate N06.CNhs11197.681-26C40.61
thymus, neonate N07.CNhs11211.713-19D30.61
thymus, neonate N10.CNhs11194.748-24E40.40
thymus, neonate N20.CNhs11186.820-7A20.39
thymus, neonate N25.CNhs11125.1362-25G70.58
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B43.17
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H34.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.06
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G54.20
urinary bladder, adult.CNhs10481.879-12E42.90
uterus, adult pregnant day19.CNhs10497.590-15F55.26
uterus, adult.CNhs10509.92-27E51.83
vagina, adult.CNhs10502.89-27D53.22
vesicular gland, adult.CNhs10491.51-27F85.02
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A111.30
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A27.37
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A39.74
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D75.16
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A410.28
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A57.55
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A610.80
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A79.46
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A810.42
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A913.98
whole body, embryo E11.CNhs11014.324-5I84.15
whole body, embryo E12.CNhs10587.857-27C95.19
whole body, embryo E13.CNhs10512.372-23H23.07
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B12.72
whole body, embryo E16.CNhs10514.453-14F24.23
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.94
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.21
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.54
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.07
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.15
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.16
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G55.24
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.01
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.67
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.02
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.05
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.48
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.29
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.16
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.12
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.03
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.14
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.50
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.25
whole body, embryo E17.5.CNhs10513.490-9F93.86
whole body, embryo E17.CNhs10517.475-3I53.25
whole body, embryo E18.CNhs10516.493-3B33.28
whole body, neonate N00.CNhs10525.657-19C23.22
whole body, neonate N01.CNhs10576.659-23C63.83
whole body, neonate N06.CNhs10515.692-21D11.76
whole body, neonate N10.CNhs10518.761-6B44.64





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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