FFCP PHASE1:Hg19::chr7:28725585..28725608,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9586|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=16844|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000396298_5end|coexpression_cluster_id=C4423|description=CAGE_peak_11_at_CREB5_5end|id=chr7:28725585..28725608,+|ontology_enrichment_celltype=CL:0000766!8.57e-14!76;CL:0002057!2.86e-13!42;CL:0000738!1.52e-12!140;CL:0000860!6.49e-12!45;CL:0000763!2.59e-11!112;CL:0000049!2.59e-11!112;CL:0000557!4.99e-11!71;CL:0002393!1.39e-09!9;CL:0002397!1.39e-09!9;CL:0002009!1.88e-09!65;CL:0000037!2.23e-09!172;CL:0000566!2.23e-09!172;CL:0000839!3.23e-09!70;CL:0000988!1.17e-08!182;CL:0002032!4.12e-08!165;CL:0000837!4.12e-08!165;CL:0002194!5.86e-08!63;CL:0000576!5.86e-08!63;CL:0000040!5.86e-08!63;CL:0000559!5.86e-08!63;CL:0000094!3.39e-07!8;CL:0002031!8.13e-07!124|ontology_enrichment_celltype_v019=CL:0001014;9.81e-20;2!CL:0001016;9.81e-20;2!CL:0000771;3.94e-19;2!CL:0000094;1.19e-18;8!CL:0000097;1.45e-17;5!CL:0000081;1.25e-13;11!CL:0000775;1.93e-13;3!CL:0000163;5.32e-10;9!CL:0000453;1.93e-08;5!CL:0000766;1.31e-07;69!CL:0000840;3.60e-07;5|ontology_enrichment_celltype_v019_2=CL:0001014,9.38e-20,2;CL:0001016,9.38e-20,2;CL:0000771,2.61e-19,2;CL:0000094,9.71e-19,8;CL:0000097,1.49e-17,5;CL:0002028,1.49e-17,5;CL:0000081,1.08e-13,11;CL:0000775,1.93e-13,3;CL:0000766,2.23e-13,72;CL:0000763,4.85e-12,108;CL:0000049,4.85e-12,108;CL:0000738,9.79e-11,136;CL:0000163,5.40e-10,9;CL:0000557,1.31e-09,67;CL:0002032,1.03e-08,161;CL:0000837,1.03e-08,161;CL:0000453,1.89e-08,5;CL:0000037,2.96e-08,168;CL:0000988,1.02e-07,177;CL:0000840,3.55e-07,5;CL:0001029,3.55e-07,5|ontology_enrichment_development_v019=UBERON:0003124;1.30e-10;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!6.15e-18!102;UBERON:0003061!6.15e-18!102;UBERON:0002193!5.93e-16!112;UBERON:0007023!1.03e-11!115;UBERON:0002371!1.33e-10!80;UBERON:0001474!3.05e-09!86;UBERON:0000178!1.22e-08!15;UBERON:0000179!1.22e-08!15;UBERON:0000463!1.22e-08!15;UBERON:0004765!6.75e-08!101;UBERON:0001434!6.75e-08!101;UBERON:0002405!3.21e-07!115|ontology_enrichment_uberon_v019=UBERON:0000178;8.02e-10;15!UBERON:0000179;8.02e-10;15!UBERON:0000463;8.02e-10;15|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.32e-13,98;UBERON:0003061,2.32e-13,98;UBERON:0002193,6.14e-12,108;UBERON:0000178,7.40e-10,15;UBERON:0000179,7.40e-10,15;UBERON:0000463,7.40e-10,15;UBERON:0002371,2.44e-08,76;UBERON:0001474,1.21e-07,82;UBERON:0004765,7.34e-07,90|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0.383829398097213,0.309632246632152,0,0,0,0,0,0,0.553995408531877,0.401088894940283,0,0,0,0,0,0,0,0,0,0,0.575384784644301,1.0246428261164,0.709446689665756,1.03423704220986,0,0,0,0,0,0,0.320929027076094,0,0,0.398927315243264,0.426224750532694,0.580418477257168,0.56738522469114,0.622822248995575,1.00499466102697,0,0,1.21079900526674,0,0.632924774881769,0.422510572623884,0.212604299965044,0.628975936525128,0,0.300353785683013,0.32145117339416,0.570025487482497,0.19891667719909,0.365328307529268,0,0,0,0,0,0,0.661044872784862,0,1.1384259382189,0,0.764546456250458,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0.486634870302636,0,0,0,0.327447688744282,0,0,0,0,0,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,8.50045273717165,9.94427678577034,5.55466707076072,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0.179060963239896,0,0,0,0.128343036279748,0.508189248444927,0,0,0,0,2.99602809578873,0,16.5766205374414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,1.01489521846434,0.764637207142375,0.569647187174163,0.952927101831156,1.23408681925858,0,1.62009431171434,3.17250070517708,0.106824071127473,0,0,0,0,0,0,0.199579371432817,0.191505370132367,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0.994147647766298,0.281338832821026,0,0,0,0,0.276283915531148,0,0.102268682502155,0.123084805461069,0,0,0,0,0.0986434056369336,0,0,0.969332746095218,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221158519862449,0,0,0,0,0.0769502585037971,0,0,0,0.217294743844016,0.31900115973192,0.0915975934018623,1.06606955203727,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9586 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16844 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000396298_5end | |||
|coexpression_cluster_id=C4423 | |||
|description=CAGE_peak_11_at_CREB5_5end | |||
|id=chr7:28725585..28725608,+ | |||
|ontology_enrichment_celltype=CL:0000766!8.57e-14!76;CL:0002057!2.86e-13!42;CL:0000738!1.52e-12!140;CL:0000860!6.49e-12!45;CL:0000763!2.59e-11!112;CL:0000049!2.59e-11!112;CL:0000557!4.99e-11!71;CL:0002393!1.39e-09!9;CL:0002397!1.39e-09!9;CL:0002009!1.88e-09!65;CL:0000037!2.23e-09!172;CL:0000566!2.23e-09!172;CL:0000839!3.23e-09!70;CL:0000988!1.17e-08!182;CL:0002032!4.12e-08!165;CL:0000837!4.12e-08!165;CL:0002194!5.86e-08!63;CL:0000576!5.86e-08!63;CL:0000040!5.86e-08!63;CL:0000559!5.86e-08!63;CL:0000094!3.39e-07!8;CL:0002031!8.13e-07!124 | |||
|ontology_enrichment_celltype_v019=CL:0001014;9.81e-20;2!CL:0001016;9.81e-20;2!CL:0000771;3.94e-19;2!CL:0000094;1.19e-18;8!CL:0000097;1.45e-17;5!CL:0000081;1.25e-13;11!CL:0000775;1.93e-13;3!CL:0000163;5.32e-10;9!CL:0000453;1.93e-08;5!CL:0000766;1.31e-07;69!CL:0000840;3.60e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,9.38e-20,2;CL:0001016,9.38e-20,2;CL:0000771,2.61e-19,2;CL:0000094,9.71e-19,8;CL:0000097,1.49e-17,5;CL:0002028,1.49e-17,5;CL:0000081,1.08e-13,11;CL:0000775,1.93e-13,3;CL:0000766,2.23e-13,72;CL:0000763,4.85e-12,108;CL:0000049,4.85e-12,108;CL:0000738,9.79e-11,136;CL:0000163,5.40e-10,9;CL:0000557,1.31e-09,67;CL:0002032,1.03e-08,161;CL:0000837,1.03e-08,161;CL:0000453,1.89e-08,5;CL:0000037,2.96e-08,168;CL:0000988,1.02e-07,177;CL:0000840,3.55e-07,5;CL:0001029,3.55e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0003124;1.30e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.15e-18!102;UBERON:0003061!6.15e-18!102;UBERON:0002193!5.93e-16!112;UBERON:0007023!1.03e-11!115;UBERON:0002371!1.33e-10!80;UBERON:0001474!3.05e-09!86;UBERON:0000178!1.22e-08!15;UBERON:0000179!1.22e-08!15;UBERON:0000463!1.22e-08!15;UBERON:0004765!6.75e-08!101;UBERON:0001434!6.75e-08!101;UBERON:0002405!3.21e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;8.02e-10;15!UBERON:0000179;8.02e-10;15!UBERON:0000463;8.02e-10;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.32e-13,98;UBERON:0003061,2.32e-13,98;UBERON:0002193,6.14e-12,108;UBERON:0000178,7.40e-10,15;UBERON:0000179,7.40e-10,15;UBERON:0000463,7.40e-10,15;UBERON:0002371,2.44e-08,76;UBERON:0001474,1.21e-07,82;UBERON:0004765,7.34e-07,90 | |||
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|short_description=p11@CREB5 | |||
}} |
Revision as of 00:48, 14 September 2013
Short description: | p11@CREB5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_CREB5_5end |
Coexpression cluster: | C4423_Neutrophils_Mast_immature_Whole_Eosinophils_placenta_spinal |
Association with transcript: | 0bp_to_ENST00000396298_5end |
EntrezGene: | CREB5 |
HGNC: | 16844 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 9.38e-20 | 2 |
immature CD1a-positive Langerhans cell | 9.38e-20 | 2 |
eosinophil | 2.61e-19 | 2 |
granulocyte | 9.71e-19 | 8 |
mast cell | 1.49e-17 | 5 |
basophil mast progenitor cell | 1.49e-17 | 5 |
blood cell | 1.08e-13 | 11 |
neutrophil | 1.93e-13 | 3 |
myeloid leukocyte | 2.23e-13 | 72 |
myeloid cell | 4.85e-12 | 108 |
common myeloid progenitor | 4.85e-12 | 108 |
leukocyte | 9.79e-11 | 136 |
endocrine cell | 5.40e-10 | 9 |
granulocyte monocyte progenitor cell | 1.31e-09 | 67 |
hematopoietic oligopotent progenitor cell | 1.03e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.03e-08 | 161 |
Langerhans cell | 1.89e-08 | 5 |
hematopoietic stem cell | 2.96e-08 | 168 |
hematopoietic cell | 1.02e-07 | 177 |
immature conventional dendritic cell | 3.55e-07 | 5 |
common dendritic progenitor | 3.55e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.32e-13 | 98 |
blood island | 2.32e-13 | 98 |
hemolymphoid system | 6.14e-12 | 108 |
blood | 7.40e-10 | 15 |
haemolymphatic fluid | 7.40e-10 | 15 |
organism substance | 7.40e-10 | 15 |
bone marrow | 2.44e-08 | 76 |
bone element | 1.21e-07 | 82 |
skeletal element | 7.34e-07 | 90 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.