FFCP PHASE1:Hg19::chr8:27168988..27169021,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2185|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9612|TSSclassifier=S|UniProt=Q14289,Q6PID4|association_with_transcript=0bp_to_ENST00000338238,ENST00000397501,ENST00000539100,ENST00000544172,NM_173174,uc003xfn.1,uc003xfo.1_5end|description=CAGE_peak_4_at_PTK2B_5end|id=chr8:27168988..27169021,+|ontology_enrichment_celltype=CL:0000988!1.78e-21!182;CL:0000037!4.76e-21!172;CL:0000566!4.76e-21!172;CL:0002032!1.47e-18!165;CL:0000837!1.47e-18!165;CL:0000738!7.54e-18!140;CL:0000838!8.16e-16!52;CL:0000542!1.05e-15!53;CL:0000051!1.05e-15!53;CL:0002031!1.07e-14!124;CL:0002087!7.15e-13!119;CL:0000084!5.07e-09!25;CL:0000827!5.07e-09!25;CL:0000945!2.67e-07!24;CL:0000826!2.67e-07!24;CL:0000791!5.96e-07!18;CL:0000789!5.96e-07!18;CL:0002420!5.96e-07!18;CL:0002419!5.96e-07!18;CL:0000790!5.96e-07!18|ontology_enrichment_celltype_v019=CL:0000542;4.00e-10;53!CL:0000084;6.58e-10;25!CL:0000236;4.26e-07;13!CL:0000945;4.39e-07;24!CL:0000791;7.76e-07;18!CL:0000789;7.76e-07;18!CL:0002419;7.76e-07;18|ontology_enrichment_celltype_v019_2=CL:0000988,1.30e-23,177;CL:0000037,7.44e-23,168;CL:0000738,1.37e-20,136;CL:0002032,7.50e-20,161;CL:0000837,7.50e-20,161;CL:0000838,7.04e-17,52;CL:0002031,8.98e-17,120;CL:0000542,3.20e-16,53;CL:0000051,3.20e-16,53;CL:0002087,4.76e-14,115;CL:0000084,6.01e-10,25;CL:0000827,6.01e-10,25;CL:0000236,1.25e-07,14;CL:0000791,2.56e-07,18;CL:0000789,2.56e-07,18;CL:0002420,2.56e-07,18;CL:0002419,2.56e-07,18;CL:0000790,2.56e-07,18;CL:0000945,2.93e-07,24;CL:0000826,2.93e-07,24;CL:0000763,7.50e-07,108;CL:0000049,7.50e-07,108|ontology_enrichment_development_v019=CL:0000051;4.00e-10;53!CL:0000790;7.76e-07;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!2.66e-14!115|ontology_enrichment_uberon_v019=UBERON:0000178;4.00e-07;15!UBERON:0000179;4.00e-07;15!UBERON:0000463;4.00e-07;15|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.71e-11,114;UBERON:0002390,2.83e-08,98;UBERON:0003061,2.83e-08,98;UBERON:0002193,2.37e-07,108;UBERON:0000178,3.90e-07,15;UBERON:0000179,3.90e-07,15;UBERON:0000463,3.90e-07,15|phase1_expression=0.363356758541113,0.214100523890983,1.12763523276777,0,1.34088328328186,0.872338524100369,0,0.631719873426831,1.82829939739887,0.245733936501509,0.697801167972428,0.436882744260345,1.58260186937072,0.74259811776028,0,0,1.20538905604795,1.46062018077475,1.95173119516203,0.861847406537515,0.204000691244253,1.25381888591235,0.572471974262113,0.273748850145768,1.00434111675842,2.13957536094264,1.47781061009902,2.2826126580967,1.18009283054671,3.0706351847777,1.23852898652861,0,0.6024118375565,3.32778609150109,4.41563043307719,1.13735385989937,1.76160263600908,3.32397245119126,1.40381113229099,1.51907609501096,2.68698569087909,2.59114932815184,2.31818010870768,1.59938062657521,1.13362783106643,0.970336244751265,0.464858073811369,0,0.309706370895104,0.863077176966451,0.768482119587302,1.41889337933151,0.689491361473237,0.645484683583826,4.06279459783025,0.376484679085209,0.272906150057846,0.449446968890169,1.53041946185451,0,3.19668562899521,0.659702600373432,0,1.27867425159808,0.290209238628584,0,0.622822248995575,0.75374599577023,0,0.217188844705117,3.02699751316684,1.10483290796269,1.26584954976354,1.05627643155971,0.850417199860174,1.04829322754188,1.68492946719743,0.600707571366025,0.964353520182481,0.855038231223746,1.39241674039363,1.64397738388171,5.27988733383968,4.36910889009705,4.44754626931777,1.28019066769952,2.40237592221607,1.14950487990897,3.30522436392431,1.90810750907073,1.70763890732835,2.34894875748376,4.20500550937752,2.64342657158052,1.12101712596307,1.84368859342554,1.57367816091066,1.57204305099666,3.70082698199117,2.84217042164153,1.95553359980154,0.946895611469467,1.94826728407911,4.56782873229212,1.17842362989935,2.87994062958707,2.97884250141517,4.35510487067296,4.94225520727537,2.46656856905514,2.21080014228679,3.76744011455568,2.96573126324121,3.21048993707656,7.31748666634838,2.71942422474159,1.53288197440768,2.06176467289578,1.77113784413652,3.18565414324097,3.25541726928209,0.950452044448374,3.91495309602209,3.4556385011693,2.49861453104692,2.36777252044017,0.821127996921047,2.21767417547206,2.94184215361858,1.44824403882799,0,0,0.12786256184353,0.722878304769133,1.00267582127178,1.01392563272577,0.795285947051099,1.94653948121054,0.283604451492204,0,0.087834785693126,3.47094550068939,1.09288586487763,1.11235332835329,1.62273696827342,2.61194605948901,1.99436940778298,2.14641561874808,3.43196946468077,2.97166001063652,0,0,0.347140501607594,1.13061588384802,0.838998872419812,0.550236083880135,0,0.516833518338658,0,0.33472061276467,1.20848795132744,1.52054421143703,0.976248230192678,0.367663080345869,0.81014194788176,0.357198913136319,0.673588117878509,0.337834441449967,0,0,0.183201743930407,1.31780417436063,3.87780264148325,0,0.496971951695318,0.506522046658319,2.51577443545116,0.573673241497627,0.354668382198357,1.6820328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4351257262837,0.865253124247578,0.378499274505237,0.109265571963696,0,0.101988829741982,0.26721740526556,0,0,2.04602485189246,4.82335434281121,0.829169439458779,2.27552590896169,1.91910583710883,1.66645102024618,3.48780113114433,4.03485642923076,0,0.700118741059814,2.42540626749863,0.653150243690884,0,3.63701086278773,0.645499848534087,0.665320713092027,0.407016343054873,0.426909383510862,0,0.449126010532934,0,1.71138021856013,0.406896178315738,0,3.22038069745642,0.641136984606466|short_description=p4@PTK2B}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=2185 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9612 | |||
|TSSclassifier=S | |||
|UniProt=Q14289,Q6PID4 | |||
|association_with_transcript=0bp_to_ENST00000338238,ENST00000397501,ENST00000539100,ENST00000544172,NM_173174,uc003xfn.1,uc003xfo.1_5end | |||
|description=CAGE_peak_4_at_PTK2B_5end | |||
|id=chr8:27168988..27169021,+ | |||
|ontology_enrichment_celltype=CL:0000988!1.78e-21!182;CL:0000037!4.76e-21!172;CL:0000566!4.76e-21!172;CL:0002032!1.47e-18!165;CL:0000837!1.47e-18!165;CL:0000738!7.54e-18!140;CL:0000838!8.16e-16!52;CL:0000542!1.05e-15!53;CL:0000051!1.05e-15!53;CL:0002031!1.07e-14!124;CL:0002087!7.15e-13!119;CL:0000084!5.07e-09!25;CL:0000827!5.07e-09!25;CL:0000945!2.67e-07!24;CL:0000826!2.67e-07!24;CL:0000791!5.96e-07!18;CL:0000789!5.96e-07!18;CL:0002420!5.96e-07!18;CL:0002419!5.96e-07!18;CL:0000790!5.96e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000542;4.00e-10;53!CL:0000084;6.58e-10;25!CL:0000236;4.26e-07;13!CL:0000945;4.39e-07;24!CL:0000791;7.76e-07;18!CL:0000789;7.76e-07;18!CL:0002419;7.76e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.30e-23,177;CL:0000037,7.44e-23,168;CL:0000738,1.37e-20,136;CL:0002032,7.50e-20,161;CL:0000837,7.50e-20,161;CL:0000838,7.04e-17,52;CL:0002031,8.98e-17,120;CL:0000542,3.20e-16,53;CL:0000051,3.20e-16,53;CL:0002087,4.76e-14,115;CL:0000084,6.01e-10,25;CL:0000827,6.01e-10,25;CL:0000236,1.25e-07,14;CL:0000791,2.56e-07,18;CL:0000789,2.56e-07,18;CL:0002420,2.56e-07,18;CL:0002419,2.56e-07,18;CL:0000790,2.56e-07,18;CL:0000945,2.93e-07,24;CL:0000826,2.93e-07,24;CL:0000763,7.50e-07,108;CL:0000049,7.50e-07,108 | |||
|ontology_enrichment_development_v019=CL:0000051;4.00e-10;53!CL:0000790;7.76e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.66e-14!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.00e-07;15!UBERON:0000179;4.00e-07;15!UBERON:0000463;4.00e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.71e-11,114;UBERON:0002390,2.83e-08,98;UBERON:0003061,2.83e-08,98;UBERON:0002193,2.37e-07,108;UBERON:0000178,3.90e-07,15;UBERON:0000179,3.90e-07,15;UBERON:0000463,3.90e-07,15 | |||
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| |||
|short_description=p4@PTK2B | |||
}} |
Revision as of 04:53, 14 September 2013
Short description: | p4@PTK2B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_PTK2B_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000338238, ENST00000397501, ENST00000539100, ENST00000544172, NM_173174, uc003xfn.1, uc003xfo.1_5end |
EntrezGene: | PTK2B |
HGNC: | 9612 |
UniProt: | Q14289Q6PID4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.30e-23 | 177 |
hematopoietic stem cell | 7.44e-23 | 168 |
leukocyte | 1.37e-20 | 136 |
hematopoietic oligopotent progenitor cell | 7.50e-20 | 161 |
hematopoietic multipotent progenitor cell | 7.50e-20 | 161 |
lymphoid lineage restricted progenitor cell | 7.04e-17 | 52 |
hematopoietic lineage restricted progenitor cell | 8.98e-17 | 120 |
lymphocyte | 3.20e-16 | 53 |
common lymphoid progenitor | 3.20e-16 | 53 |
nongranular leukocyte | 4.76e-14 | 115 |
T cell | 6.01e-10 | 25 |
pro-T cell | 6.01e-10 | 25 |
B cell | 1.25e-07 | 14 |
mature alpha-beta T cell | 2.56e-07 | 18 |
alpha-beta T cell | 2.56e-07 | 18 |
immature T cell | 2.56e-07 | 18 |
mature T cell | 2.56e-07 | 18 |
immature alpha-beta T cell | 2.56e-07 | 18 |
lymphocyte of B lineage | 2.93e-07 | 24 |
pro-B cell | 2.93e-07 | 24 |
myeloid cell | 7.50e-07 | 108 |
common myeloid progenitor | 7.50e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.71e-11 | 114 |
hematopoietic system | 2.83e-08 | 98 |
blood island | 2.83e-08 | 98 |
hemolymphoid system | 2.37e-07 | 108 |
blood | 3.90e-07 | 15 |
haemolymphatic fluid | 3.90e-07 | 15 |
organism substance | 3.90e-07 | 15 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.