FFCP PHASE1:Hg19::chr8:72755203..72755239,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9242|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7321|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000518440_5end|coexpression_cluster_id=C0|description=CAGE_peak_10_at_MSC_5end|id=chr8:72755203..72755239,-|ontology_enrichment_celltype=CL:0002057!1.57e-26!42;CL:0000860!4.73e-25!45;CL:0002194!2.12e-24!63;CL:0000576!2.12e-24!63;CL:0000040!2.12e-24!63;CL:0000559!2.12e-24!63;CL:0002009!3.76e-23!65;CL:0000766!5.77e-21!76;CL:0000839!2.35e-20!70;CL:0000557!7.56e-20!71;CL:0000048!1.10e-13!430;CL:0002087!1.33e-13!119;CL:0000723!2.02e-13!436;CL:0000034!1.79e-12!444;CL:0000219!3.92e-12!390;CL:0000134!9.84e-12!358;CL:0000738!1.75e-11!140;CL:0002031!4.58e-11!124;CL:0002320!6.74e-11!365;CL:0000763!1.74e-10!112;CL:0000049!1.74e-10!112;CL:0002032!7.44e-07!165;CL:0000837!7.44e-07!165;CL:0002371!7.57e-07!591;CL:0000037!8.39e-07!172;CL:0000566!8.39e-07!172|ontology_enrichment_celltype_v019=CL:0000860;1.36e-76;33!CL:0002057;1.36e-76;33!CL:0000473;5.33e-58;39!CL:0000234;5.33e-58;39!CL:0000576;2.40e-43;48!CL:0000766;1.87e-26;69!CL:0000763;9.83e-12;100!CL:0002087;2.15e-11;104!CL:0002393;6.83e-07;6!CL:0002397;6.83e-07;6!CL:0000738;7.37e-07;136|ontology_enrichment_celltype_v019_2=CL:0000860,9.00e-83,42;CL:0002057,9.00e-83,42;CL:0000473,9.87e-77,48;CL:0000234,9.87e-77,48;CL:0002194,5.83e-60,59;CL:0000576,5.83e-60,59;CL:0000040,5.83e-60,59;CL:0000559,5.83e-60,59;CL:0002009,8.51e-58,61;CL:0000839,5.97e-53,66;CL:0000557,4.57e-52,67;CL:0000766,2.08e-51,72;CL:0000763,5.14e-32,108;CL:0000049,5.14e-32,108;CL:0002087,1.44e-27,115;CL:0002031,3.90e-26,120;CL:0000738,5.55e-24,136;CL:0002032,3.67e-19,161;CL:0000837,3.67e-19,161;CL:0000037,4.55e-18,168;CL:0000988,8.63e-17,177;CL:0000134,3.56e-12,354;CL:0002320,9.04e-12,361;CL:0000219,3.72e-11,386;CL:0000048,2.31e-09,427;CL:0000723,4.13e-09,433;CL:0000034,8.75e-09,441|ontology_enrichment_development_v019=CL:0002057;2.09e-62;42!CL:0000049;7.29e-09;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!8.47e-18!80;UBERON:0002193!8.83e-17!112;UBERON:0002405!2.39e-16!115;UBERON:0001474!1.83e-15!86;UBERON:0002390!7.26e-15!102;UBERON:0003061!7.26e-15!102;UBERON:0004765!4.01e-13!101;UBERON:0001434!4.01e-13!101;UBERON:0002204!9.19e-12!167;UBERON:0002384!1.39e-10!375;UBERON:0003081!2.17e-10!216|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.80e-45,76;UBERON:0001474,2.29e-41,82;UBERON:0002405,2.81e-38,93;UBERON:0004765,4.21e-37,90;UBERON:0002390,1.58e-33,98;UBERON:0003061,1.58e-33,98;UBERON:0001434,1.01e-32,100;UBERON:0002193,5.27e-32,108;UBERON:0002204,2.94e-18,167;UBERON:0003081,3.96e-16,203;UBERON:0002384,3.22e-11,371;UBERON:0000926,4.17e-10,315;UBERON:0004120,4.17e-10,315;UBERON:0006603,4.17e-10,315|phase1_expression=0.726713517082227,0.642301571672949,0.704772020479856,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0.313454721478088,0,0,0,0.305653622991805,0.492603536699674,0.393553906568396,0.786728553697808,1.53531759238885,0.309632246632152,0,0,0,0,0,0,1.66198622559563,3.60980005446255,2.60413044859022,0,0,0,0.726991193897824,0.755751887377619,0.970336244751265,7.20530014407622,9.04569353648017,6.50383378879718,5.46615545412086,6.14785695669842,5.20260905754887,6.89491361473237,8.39130088658974,1.35426486594342,3.57660445130949,3.82068610080984,4.94391665779186,14.0798590490615,9.9487998393589,7.03270838378945,1.31940520074686,1.79517291859469,0.426224750532694,32.79364396503,25.5323351111013,16.1933784738849,3.51748131359441,5.73631210262222,5.42972111762792,18.7673845816344,25.411156883142,18.0383560841304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,2.43806866313962,0,0.255725123687061,0,0,0,0,0,0,0,0.087834785693126,0.130979075497713,0,0,0.324547393654683,0.174129737299267,0.664789802594326,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.506522046658319,0.397227542439656,0,0.709336764396714,0,2.1349799145941,0.24666754841716,0,0.134710672069688,0.163461903113459,0.454072282934794,0,0.234321431833797,0,0,0,0.117434498643765,0,0,0,0,0.103325781175765,0,0,0,1.43723628363248,0,0,0,0,0,0.150238058906597,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0.276149695926898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,1.38134921352481,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0.462985512576611,0.570762456703795,0,0,0,2.10603838625314,0.891786973732369,0,0,0,0,0,0,0,0,0,0,0,0.825472625798197,0.763976851116555,0,0,0.205654985406647,0,0.285826432630578,0,0.87192013766656,0,1.42198887333556,0,0.845302752556,0.26593811658487,0,0,0,0,0.428933980974443,0,0,0,0,0,0.602878754119172,1.74306691720059,0.399891964728228,0,0,0,0.718874566474748,0,0,0,0.410952645100767,0.179060963239896,0,0,0,0.256686072559497,0.25409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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9242 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7321 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000518440_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_10_at_MSC_5end | |||
|id=chr8:72755203..72755239,- | |||
|ontology_enrichment_celltype=CL:0002057!1.57e-26!42;CL:0000860!4.73e-25!45;CL:0002194!2.12e-24!63;CL:0000576!2.12e-24!63;CL:0000040!2.12e-24!63;CL:0000559!2.12e-24!63;CL:0002009!3.76e-23!65;CL:0000766!5.77e-21!76;CL:0000839!2.35e-20!70;CL:0000557!7.56e-20!71;CL:0000048!1.10e-13!430;CL:0002087!1.33e-13!119;CL:0000723!2.02e-13!436;CL:0000034!1.79e-12!444;CL:0000219!3.92e-12!390;CL:0000134!9.84e-12!358;CL:0000738!1.75e-11!140;CL:0002031!4.58e-11!124;CL:0002320!6.74e-11!365;CL:0000763!1.74e-10!112;CL:0000049!1.74e-10!112;CL:0002032!7.44e-07!165;CL:0000837!7.44e-07!165;CL:0002371!7.57e-07!591;CL:0000037!8.39e-07!172;CL:0000566!8.39e-07!172 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.36e-76;33!CL:0002057;1.36e-76;33!CL:0000473;5.33e-58;39!CL:0000234;5.33e-58;39!CL:0000576;2.40e-43;48!CL:0000766;1.87e-26;69!CL:0000763;9.83e-12;100!CL:0002087;2.15e-11;104!CL:0002393;6.83e-07;6!CL:0002397;6.83e-07;6!CL:0000738;7.37e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,9.00e-83,42;CL:0002057,9.00e-83,42;CL:0000473,9.87e-77,48;CL:0000234,9.87e-77,48;CL:0002194,5.83e-60,59;CL:0000576,5.83e-60,59;CL:0000040,5.83e-60,59;CL:0000559,5.83e-60,59;CL:0002009,8.51e-58,61;CL:0000839,5.97e-53,66;CL:0000557,4.57e-52,67;CL:0000766,2.08e-51,72;CL:0000763,5.14e-32,108;CL:0000049,5.14e-32,108;CL:0002087,1.44e-27,115;CL:0002031,3.90e-26,120;CL:0000738,5.55e-24,136;CL:0002032,3.67e-19,161;CL:0000837,3.67e-19,161;CL:0000037,4.55e-18,168;CL:0000988,8.63e-17,177;CL:0000134,3.56e-12,354;CL:0002320,9.04e-12,361;CL:0000219,3.72e-11,386;CL:0000048,2.31e-09,427;CL:0000723,4.13e-09,433;CL:0000034,8.75e-09,441 | |||
|ontology_enrichment_development_v019=CL:0002057;2.09e-62;42!CL:0000049;7.29e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!8.47e-18!80;UBERON:0002193!8.83e-17!112;UBERON:0002405!2.39e-16!115;UBERON:0001474!1.83e-15!86;UBERON:0002390!7.26e-15!102;UBERON:0003061!7.26e-15!102;UBERON:0004765!4.01e-13!101;UBERON:0001434!4.01e-13!101;UBERON:0002204!9.19e-12!167;UBERON:0002384!1.39e-10!375;UBERON:0003081!2.17e-10!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.80e-45,76;UBERON:0001474,2.29e-41,82;UBERON:0002405,2.81e-38,93;UBERON:0004765,4.21e-37,90;UBERON:0002390,1.58e-33,98;UBERON:0003061,1.58e-33,98;UBERON:0001434,1.01e-32,100;UBERON:0002193,5.27e-32,108;UBERON:0002204,2.94e-18,167;UBERON:0003081,3.96e-16,203;UBERON:0002384,3.22e-11,371;UBERON:0000926,4.17e-10,315;UBERON:0004120,4.17e-10,315;UBERON:0006603,4.17e-10,315 | |||
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| |||
|short_description=p10@MSC | |||
}} |
Revision as of 05:59, 14 September 2013
Short description: | p10@MSC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_MSC_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 0bp_to_ENST00000518440_5end |
EntrezGene: | MSC |
HGNC: | 7321 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 9.00e-83 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.00e-83 | 42 |
defensive cell | 9.87e-77 | 48 |
phagocyte | 9.87e-77 | 48 |
monopoietic cell | 5.83e-60 | 59 |
monocyte | 5.83e-60 | 59 |
monoblast | 5.83e-60 | 59 |
promonocyte | 5.83e-60 | 59 |
macrophage dendritic cell progenitor | 8.51e-58 | 61 |
myeloid lineage restricted progenitor cell | 5.97e-53 | 66 |
granulocyte monocyte progenitor cell | 4.57e-52 | 67 |
myeloid leukocyte | 2.08e-51 | 72 |
myeloid cell | 5.14e-32 | 108 |
common myeloid progenitor | 5.14e-32 | 108 |
nongranular leukocyte | 1.44e-27 | 115 |
hematopoietic lineage restricted progenitor cell | 3.90e-26 | 120 |
leukocyte | 5.55e-24 | 136 |
hematopoietic oligopotent progenitor cell | 3.67e-19 | 161 |
hematopoietic multipotent progenitor cell | 3.67e-19 | 161 |
hematopoietic stem cell | 4.55e-18 | 168 |
hematopoietic cell | 8.63e-17 | 177 |
mesenchymal cell | 3.56e-12 | 354 |
connective tissue cell | 9.04e-12 | 361 |
motile cell | 3.72e-11 | 386 |
multi fate stem cell | 2.31e-09 | 427 |
somatic stem cell | 4.13e-09 | 433 |
stem cell | 8.75e-09 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.80e-45 | 76 |
bone element | 2.29e-41 | 82 |
immune system | 2.81e-38 | 93 |
skeletal element | 4.21e-37 | 90 |
hematopoietic system | 1.58e-33 | 98 |
blood island | 1.58e-33 | 98 |
skeletal system | 1.01e-32 | 100 |
hemolymphoid system | 5.27e-32 | 108 |
musculoskeletal system | 2.94e-18 | 167 |
lateral plate mesoderm | 3.96e-16 | 203 |
connective tissue | 3.22e-11 | 371 |
mesoderm | 4.17e-10 | 315 |
mesoderm-derived structure | 4.17e-10 | 315 |
presumptive mesoderm | 4.17e-10 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.