FFCP PHASE1:Hg19::chrX:19854375..19854404,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=30011|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=13867|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_AB590253,CU677457,DQ892387,DQ895600_5end|coexpression_cluster_id=C13|description=CAGE_peak_14_at_SH3KBP1_5end|id=chrX:19854375..19854404,-|ontology_enrichment_celltype=CL:0000738!2.51e-26!140;CL:0000037!3.23e-26!172;CL:0000566!3.23e-26!172;CL:0000988!7.70e-25!182;CL:0002032!1.60e-24!165;CL:0000837!1.60e-24!165;CL:0002031!5.01e-23!124;CL:0000557!1.03e-22!71;CL:0000766!1.07e-22!76;CL:0000763!3.45e-22!112;CL:0000049!3.45e-22!112;CL:0000839!3.84e-22!70;CL:0002087!9.24e-22!119;CL:0002057!1.11e-21!42;CL:0000860!1.73e-21!45;CL:0002194!5.78e-21!63;CL:0000576!5.78e-21!63;CL:0000040!5.78e-21!63;CL:0000559!5.78e-21!63;CL:0002009!7.75e-21!65;CL:0000134!9.42e-14!358;CL:0002320!1.84e-12!365;CL:0000219!1.74e-11!390;CL:0000048!6.12e-09!430;CL:0000723!3.95e-08!436;CL:0000034!1.44e-07!444|ontology_enrichment_celltype_v019=CL:0000860;1.67e-41;33!CL:0002057;1.67e-41;33!CL:0000473;2.92e-33;39!CL:0000234;2.92e-33;39!CL:0000576;3.84e-24;48!CL:0000766;2.81e-16;69!CL:0000763;3.75e-12;100!CL:0000738;4.72e-10;136!CL:0000988;1.10e-08;177!CL:0002087;1.52e-07;104|ontology_enrichment_celltype_v019_2=CL:0000473,3.98e-45,48;CL:0000234,3.98e-45,48;CL:0000860,6.79e-45,42;CL:0002057,6.79e-45,42;CL:0000763,8.87e-37,108;CL:0000049,8.87e-37,108;CL:0000766,4.25e-35,72;CL:0002194,1.10e-34,59;CL:0000576,1.10e-34,59;CL:0000040,1.10e-34,59;CL:0000559,1.10e-34,59;CL:0002009,2.44e-33,61;CL:0000839,4.46e-33,66;CL:0000557,1.75e-32,67;CL:0000037,1.78e-31,168;CL:0002032,1.85e-31,161;CL:0000837,1.85e-31,161;CL:0000988,4.56e-31,177;CL:0000738,1.56e-27,136;CL:0002087,6.69e-26,115;CL:0002031,1.54e-24,120;CL:0000134,3.41e-16,354;CL:0002320,1.18e-15,361;CL:0000219,1.16e-14,386;CL:0000048,1.93e-11,427;CL:0000723,4.04e-11,433;CL:0000034,1.04e-10,441|ontology_enrichment_development_v019=CL:0002057;2.70e-32;42!CL:0000049;1.72e-10;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!1.67e-22!102;UBERON:0003061!1.67e-22!102;UBERON:0002193!5.27e-20!112;UBERON:0002371!2.26e-19!80;UBERON:0001474!3.49e-18!86;UBERON:0002405!6.80e-14!115;UBERON:0004765!1.77e-12!101;UBERON:0001434!1.77e-12!101;UBERON:0002384!5.26e-12!375|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.73e-28,76;UBERON:0001474,1.67e-27,82;UBERON:0002390,8.46e-26,98;UBERON:0003061,8.46e-26,98;UBERON:0004765,1.98e-24,90;UBERON:0002193,1.04e-22,108;UBERON:0002405,1.66e-21,93;UBERON:0001434,2.80e-21,100;UBERON:0002384,6.39e-15,371;UBERON:0003081,3.56e-11,203;UBERON:0002204,7.00e-11,167|phase1_expression=0.181678379270557,1.2846031433459,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0.123121058076788,0,0.626909442956176,0,0,0,3.20936304141395,2.46301768349837,1.49550484495991,0,0.383829398097213,0.154816123316076,0,0,0,0.309868802321207,0,0.587200878669695,0,1.20326668482085,0.217010870715852,0.447830948479849,0.32389366601898,0,2.32637182047304,0.377875943688809,0.970336244751265,1.62700325833979,2.46700732813095,1.23882548358041,0.863077176966451,3.58624989140741,1.18241114944293,0.344745680736619,1.29096936716765,0,1.50593871634084,2.45615535052061,1.12361742222542,0.918251677112708,0.641858054152187,1.27867425159808,0.989553900560148,1.19678194572979,1.70489900213078,2.32167390902867,1.13477044938228,1.86846674698672,1.50749199154046,3.65038042894141,1.73751075764093,1.81619850790011,1.10483290796269,0.949387162322653,1.47878700418359,1.06302149982522,0.419317291016752,0.44931452458598,1.20141514273205,0.48217676009124,0,0.99458338599545,0,0,0,0,0,0.400395987036012,0,0.661044872784862,0,0.569212969109448,0.587237189370939,0.382273228125229,0,0,0,0,0,0.411202997999018,0.167186495390678,0,0,0,0,0,0.221533894583621,0.270803863765016,0.640456598628376,0.260118695119756,0.328875809207352,0.276350017785848,0.579606171470105,0.444859689486181,0,0,0.113309342697566,0.383220493601921,0,0,0.318565414324097,0,0.950452044448374,0,0.383959833463255,0,0.236777252044017,0,0,0,0.434473211648397,0,0,0.255725123687061,0.361439152384566,0.50133791063589,0,0,0,0.0945348171640679,0,0.087834785693126,0,0,0,0,0.174129737299267,0.531831842075461,0.715471872916026,0.571994910780128,0.74291500265913,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0,0,0,0,0,0,0,0,0.163461903113459,0.302714855289863,0,0,0,0,0,0,0,0,0,0.245668634623536,0.309977343527296,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0.358779271377724,0.640672166455702,0.211931901159562,0.600182192168805,0.412210116953756,0,0.18611685633159,0,0.292311015483596,0,0.0920498986422993,0.323292113637624,0,0.201504196455281,0,0.193260853163297,0.272746120590835,0,0,0.132529768321485,0,0.207322110030741,0,0,0,0,0,0,0.721879481669586,0.118306800039844,0.168584690078102,0.241011029883482,0.110293972732394,0,0,0,0,0,0.7381554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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=30011 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=13867 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_AB590253,CU677457,DQ892387,DQ895600_5end | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_14_at_SH3KBP1_5end | |||
|id=chrX:19854375..19854404,- | |||
|ontology_enrichment_celltype=CL:0000738!2.51e-26!140;CL:0000037!3.23e-26!172;CL:0000566!3.23e-26!172;CL:0000988!7.70e-25!182;CL:0002032!1.60e-24!165;CL:0000837!1.60e-24!165;CL:0002031!5.01e-23!124;CL:0000557!1.03e-22!71;CL:0000766!1.07e-22!76;CL:0000763!3.45e-22!112;CL:0000049!3.45e-22!112;CL:0000839!3.84e-22!70;CL:0002087!9.24e-22!119;CL:0002057!1.11e-21!42;CL:0000860!1.73e-21!45;CL:0002194!5.78e-21!63;CL:0000576!5.78e-21!63;CL:0000040!5.78e-21!63;CL:0000559!5.78e-21!63;CL:0002009!7.75e-21!65;CL:0000134!9.42e-14!358;CL:0002320!1.84e-12!365;CL:0000219!1.74e-11!390;CL:0000048!6.12e-09!430;CL:0000723!3.95e-08!436;CL:0000034!1.44e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.67e-41;33!CL:0002057;1.67e-41;33!CL:0000473;2.92e-33;39!CL:0000234;2.92e-33;39!CL:0000576;3.84e-24;48!CL:0000766;2.81e-16;69!CL:0000763;3.75e-12;100!CL:0000738;4.72e-10;136!CL:0000988;1.10e-08;177!CL:0002087;1.52e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,3.98e-45,48;CL:0000234,3.98e-45,48;CL:0000860,6.79e-45,42;CL:0002057,6.79e-45,42;CL:0000763,8.87e-37,108;CL:0000049,8.87e-37,108;CL:0000766,4.25e-35,72;CL:0002194,1.10e-34,59;CL:0000576,1.10e-34,59;CL:0000040,1.10e-34,59;CL:0000559,1.10e-34,59;CL:0002009,2.44e-33,61;CL:0000839,4.46e-33,66;CL:0000557,1.75e-32,67;CL:0000037,1.78e-31,168;CL:0002032,1.85e-31,161;CL:0000837,1.85e-31,161;CL:0000988,4.56e-31,177;CL:0000738,1.56e-27,136;CL:0002087,6.69e-26,115;CL:0002031,1.54e-24,120;CL:0000134,3.41e-16,354;CL:0002320,1.18e-15,361;CL:0000219,1.16e-14,386;CL:0000048,1.93e-11,427;CL:0000723,4.04e-11,433;CL:0000034,1.04e-10,441 | |||
|ontology_enrichment_development_v019=CL:0002057;2.70e-32;42!CL:0000049;1.72e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.67e-22!102;UBERON:0003061!1.67e-22!102;UBERON:0002193!5.27e-20!112;UBERON:0002371!2.26e-19!80;UBERON:0001474!3.49e-18!86;UBERON:0002405!6.80e-14!115;UBERON:0004765!1.77e-12!101;UBERON:0001434!1.77e-12!101;UBERON:0002384!5.26e-12!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.73e-28,76;UBERON:0001474,1.67e-27,82;UBERON:0002390,8.46e-26,98;UBERON:0003061,8.46e-26,98;UBERON:0004765,1.98e-24,90;UBERON:0002193,1.04e-22,108;UBERON:0002405,1.66e-21,93;UBERON:0001434,2.80e-21,100;UBERON:0002384,6.39e-15,371;UBERON:0003081,3.56e-11,203;UBERON:0002204,7.00e-11,167 | |||
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| |||
|short_description=p14@SH3KBP1 | |||
}} |
Revision as of 11:33, 14 September 2013
Short description: | p14@SH3KBP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_14_at_SH3KBP1_5end |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | 0bp_to_AB590253, CU677457, DQ892387, DQ895600_5end |
EntrezGene: | SH3KBP1 |
HGNC: | 13867 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 3.98e-45 | 48 |
phagocyte | 3.98e-45 | 48 |
classical monocyte | 6.79e-45 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.79e-45 | 42 |
myeloid cell | 8.87e-37 | 108 |
common myeloid progenitor | 8.87e-37 | 108 |
myeloid leukocyte | 4.25e-35 | 72 |
monopoietic cell | 1.10e-34 | 59 |
monocyte | 1.10e-34 | 59 |
monoblast | 1.10e-34 | 59 |
promonocyte | 1.10e-34 | 59 |
macrophage dendritic cell progenitor | 2.44e-33 | 61 |
myeloid lineage restricted progenitor cell | 4.46e-33 | 66 |
granulocyte monocyte progenitor cell | 1.75e-32 | 67 |
hematopoietic stem cell | 1.78e-31 | 168 |
hematopoietic oligopotent progenitor cell | 1.85e-31 | 161 |
hematopoietic multipotent progenitor cell | 1.85e-31 | 161 |
hematopoietic cell | 4.56e-31 | 177 |
leukocyte | 1.56e-27 | 136 |
nongranular leukocyte | 6.69e-26 | 115 |
hematopoietic lineage restricted progenitor cell | 1.54e-24 | 120 |
mesenchymal cell | 3.41e-16 | 354 |
connective tissue cell | 1.18e-15 | 361 |
motile cell | 1.16e-14 | 386 |
multi fate stem cell | 1.93e-11 | 427 |
somatic stem cell | 4.04e-11 | 433 |
stem cell | 1.04e-10 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.73e-28 | 76 |
bone element | 1.67e-27 | 82 |
hematopoietic system | 8.46e-26 | 98 |
blood island | 8.46e-26 | 98 |
skeletal element | 1.98e-24 | 90 |
hemolymphoid system | 1.04e-22 | 108 |
immune system | 1.66e-21 | 93 |
skeletal system | 2.80e-21 | 100 |
connective tissue | 6.39e-15 | 371 |
lateral plate mesoderm | 3.56e-11 | 203 |
musculoskeletal system | 7.00e-11 | 167 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.