FFCP PHASE1:Hg19::chrX:56589703..56589717,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=29978|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=12509|TSSclassifier=N|UniProt=Q9UHD9|association_with_transcript=-308bp_to_ENST00000338222,NM_013444_5end|coexpression_cluster_id=C7|description=CAGE_peak_5_at_UBQLN2_5end|id=chrX:56589703..56589717,+|ontology_enrichment_celltype=CL:0002009!1.20e-36!65;CL:0002194!1.25e-36!63;CL:0000576!1.25e-36!63;CL:0000040!1.25e-36!63;CL:0000559!1.25e-36!63;CL:0000860!2.70e-35!45;CL:0000557!4.66e-35!71;CL:0000839!3.60e-34!70;CL:0002057!7.48e-34!42;CL:0000766!8.52e-33!76;CL:0000763!4.24e-27!112;CL:0000049!4.24e-27!112;CL:0000738!1.02e-18!140;CL:0000037!9.74e-18!172;CL:0000566!9.74e-18!172;CL:0002087!2.68e-17!119;CL:0000988!1.10e-16!182;CL:0002031!3.77e-16!124;CL:0002032!1.13e-15!165;CL:0000837!1.13e-15!165|ontology_enrichment_celltype_v019=CL:0000860;6.23e-118;33!CL:0002057;6.23e-118;33!CL:0000473;2.83e-85;39!CL:0000234;2.83e-85;39!CL:0000576;1.98e-66;48!CL:0000766;1.01e-37;69!CL:0000763;1.57e-18;100!CL:0002087;2.32e-16;104!CL:0000738;1.06e-11;136!CL:0000037;3.40e-07;1!CL:0001024;3.40e-07;1|ontology_enrichment_celltype_v019_2=CL:0000860,1.97e-109,42;CL:0002057,1.97e-109,42;CL:0000473,2.81e-102,48;CL:0000234,2.81e-102,48;CL:0002194,1.50e-86,59;CL:0000576,1.50e-86,59;CL:0000040,1.50e-86,59;CL:0000559,1.50e-86,59;CL:0002009,1.37e-83,61;CL:0000839,5.78e-77,66;CL:0000557,9.34e-76,67;CL:0000766,3.28e-70,72;CL:0000763,2.81e-45,108;CL:0000049,2.81e-45,108;CL:0002087,3.19e-42,115;CL:0002031,2.95e-40,120;CL:0000738,6.30e-35,136;CL:0000037,2.18e-29,168;CL:0002032,1.06e-28,161;CL:0000837,1.06e-28,161;CL:0000988,1.26e-27,177;CL:0000134,4.91e-11,354;CL:0002320,1.04e-10,361;CL:0000219,1.46e-09,386;CL:0000048,5.07e-09,427;CL:0000723,8.16e-09,433;CL:0000034,1.51e-08,441;CL:0001024,4.34e-07,1|ontology_enrichment_development_v019=CL:0002057;8.99e-82;42!CL:0000049;1.25e-14;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!8.70e-35!80;UBERON:0001474!5.71e-32!86;UBERON:0002390!3.19e-29!102;UBERON:0003061!3.19e-29!102;UBERON:0002193!1.52e-27!112;UBERON:0004765!3.84e-27!101;UBERON:0001434!3.84e-27!101;UBERON:0002405!2.58e-24!115;UBERON:0002204!1.18e-18!167;UBERON:0003081!1.48e-11!216|ontology_enrichment_uberon_v019=UBERON:0007195;3.40e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.02e-75,76;UBERON:0001474,7.31e-70,82;UBERON:0004765,2.96e-63,90;UBERON:0002405,4.57e-61,93;UBERON:0002390,1.03e-57,98;UBERON:0003061,1.03e-57,98;UBERON:0001434,1.83e-56,100;UBERON:0002193,6.29e-52,108;UBERON:0002204,4.26e-34,167;UBERON:0003081,4.17e-27,203;UBERON:0000926,1.68e-15,315;UBERON:0004120,1.68e-15,315;UBERON:0006603,1.68e-15,315;UBERON:0002384,3.02e-11,371;UBERON:0007195,4.90e-07,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.436882744260345,0,0.123766352960047,0,0.672325146451775,0,1.46062018077475,0,0.123121058076788,0,0,0,0.273748850145768,0,0,0,0,0.393364276848904,0,0.309632246632152,0,0,0,0.232401601740905,0.142169232487422,1.17440175733939,0.553995408531877,0,0.217010870715852,1.11957737119962,0.32389366601898,0.77272670290256,1.74477886535478,1.51150377475524,0.485168122375632,2.78914844286822,3.28934310417461,1.23882548358041,4.02769349251011,7.68482119587302,5.67557351732605,1.72372840368309,1.29096936716765,0,2.82363509313907,3.27487380069415,1.79778787556068,3.97909060082173,3.53021929783703,1.27867425159808,5.93732340336089,5.58498241340569,6.39337125799041,2.03146467040009,2.26954089876456,0,8.29120595347253,9.38669253156363,4.77815458351257,1.21079900526674,3.68277635987565,2.84816148696796,1.26753171787165,0.425208599930087,0.419317291016752,0.561643155732475,0.750884464207532,0,0.285012743741249,0,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0.590129310341499,0,0,0.167186495390678,0,0,0,0,0,0,0,0.128091319725675,0,0.164437904603676,0,0,0.14828656316206,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0,0,0,0,0.189069634328136,0,0.175669571386252,0,0.364295288292542,0,0,0.174129737299267,0,0.476981248610684,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0.33472061276467,0.402829317109147,0,0,0,0,0.0892997282840798,0,0,0,0.949265659568129,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277064115484183,0,0,0,0,0.179389635688862,0.213557388818567,0,0,0,0.257640540045629,0,0,0,0.252433774244115,0,0,0,0,0,0.386521706326594,0.272746120590835,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0.721879481669586,0,0.168584690078102,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0.109750285408626,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0.190254152234598,0,0,0.492434012174795,0.468008530278475,0.297262324577456,0,0.335964256397719,0,0,0,0,0.492663237895943,0.352193736052904,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,2.10833939483032,0,0,0,0,0.205476322550383,0,0,0,0.215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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=29978 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12509 | |||
|TSSclassifier=N | |||
|UniProt=Q9UHD9 | |||
|association_with_transcript=-308bp_to_ENST00000338222,NM_013444_5end | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_5_at_UBQLN2_5end | |||
|id=chrX:56589703..56589717,+ | |||
|ontology_enrichment_celltype=CL:0002009!1.20e-36!65;CL:0002194!1.25e-36!63;CL:0000576!1.25e-36!63;CL:0000040!1.25e-36!63;CL:0000559!1.25e-36!63;CL:0000860!2.70e-35!45;CL:0000557!4.66e-35!71;CL:0000839!3.60e-34!70;CL:0002057!7.48e-34!42;CL:0000766!8.52e-33!76;CL:0000763!4.24e-27!112;CL:0000049!4.24e-27!112;CL:0000738!1.02e-18!140;CL:0000037!9.74e-18!172;CL:0000566!9.74e-18!172;CL:0002087!2.68e-17!119;CL:0000988!1.10e-16!182;CL:0002031!3.77e-16!124;CL:0002032!1.13e-15!165;CL:0000837!1.13e-15!165 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.23e-118;33!CL:0002057;6.23e-118;33!CL:0000473;2.83e-85;39!CL:0000234;2.83e-85;39!CL:0000576;1.98e-66;48!CL:0000766;1.01e-37;69!CL:0000763;1.57e-18;100!CL:0002087;2.32e-16;104!CL:0000738;1.06e-11;136!CL:0000037;3.40e-07;1!CL:0001024;3.40e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.97e-109,42;CL:0002057,1.97e-109,42;CL:0000473,2.81e-102,48;CL:0000234,2.81e-102,48;CL:0002194,1.50e-86,59;CL:0000576,1.50e-86,59;CL:0000040,1.50e-86,59;CL:0000559,1.50e-86,59;CL:0002009,1.37e-83,61;CL:0000839,5.78e-77,66;CL:0000557,9.34e-76,67;CL:0000766,3.28e-70,72;CL:0000763,2.81e-45,108;CL:0000049,2.81e-45,108;CL:0002087,3.19e-42,115;CL:0002031,2.95e-40,120;CL:0000738,6.30e-35,136;CL:0000037,2.18e-29,168;CL:0002032,1.06e-28,161;CL:0000837,1.06e-28,161;CL:0000988,1.26e-27,177;CL:0000134,4.91e-11,354;CL:0002320,1.04e-10,361;CL:0000219,1.46e-09,386;CL:0000048,5.07e-09,427;CL:0000723,8.16e-09,433;CL:0000034,1.51e-08,441;CL:0001024,4.34e-07,1 | |||
|ontology_enrichment_development_v019=CL:0002057;8.99e-82;42!CL:0000049;1.25e-14;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!8.70e-35!80;UBERON:0001474!5.71e-32!86;UBERON:0002390!3.19e-29!102;UBERON:0003061!3.19e-29!102;UBERON:0002193!1.52e-27!112;UBERON:0004765!3.84e-27!101;UBERON:0001434!3.84e-27!101;UBERON:0002405!2.58e-24!115;UBERON:0002204!1.18e-18!167;UBERON:0003081!1.48e-11!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0007195;3.40e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.02e-75,76;UBERON:0001474,7.31e-70,82;UBERON:0004765,2.96e-63,90;UBERON:0002405,4.57e-61,93;UBERON:0002390,1.03e-57,98;UBERON:0003061,1.03e-57,98;UBERON:0001434,1.83e-56,100;UBERON:0002193,6.29e-52,108;UBERON:0002204,4.26e-34,167;UBERON:0003081,4.17e-27,203;UBERON:0000926,1.68e-15,315;UBERON:0004120,1.68e-15,315;UBERON:0006603,1.68e-15,315;UBERON:0002384,3.02e-11,371;UBERON:0007195,4.90e-07,1 | |||
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| |||
|short_description=p5@UBQLN2 | |||
}} |
Revision as of 12:17, 14 September 2013
Short description: | p5@UBQLN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_UBQLN2_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | -308bp_to_ENST00000338222, NM_013444_5end |
EntrezGene: | UBQLN2 |
HGNC: | 12509 |
UniProt: | Q9UHD9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.97e-109 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.97e-109 | 42 |
defensive cell | 2.81e-102 | 48 |
phagocyte | 2.81e-102 | 48 |
monopoietic cell | 1.50e-86 | 59 |
monocyte | 1.50e-86 | 59 |
monoblast | 1.50e-86 | 59 |
promonocyte | 1.50e-86 | 59 |
macrophage dendritic cell progenitor | 1.37e-83 | 61 |
myeloid lineage restricted progenitor cell | 5.78e-77 | 66 |
granulocyte monocyte progenitor cell | 9.34e-76 | 67 |
myeloid leukocyte | 3.28e-70 | 72 |
myeloid cell | 2.81e-45 | 108 |
common myeloid progenitor | 2.81e-45 | 108 |
nongranular leukocyte | 3.19e-42 | 115 |
hematopoietic lineage restricted progenitor cell | 2.95e-40 | 120 |
leukocyte | 6.30e-35 | 136 |
hematopoietic stem cell | 2.18e-29 | 168 |
hematopoietic oligopotent progenitor cell | 1.06e-28 | 161 |
hematopoietic multipotent progenitor cell | 1.06e-28 | 161 |
hematopoietic cell | 1.26e-27 | 177 |
mesenchymal cell | 4.91e-11 | 354 |
connective tissue cell | 1.04e-10 | 361 |
motile cell | 1.46e-09 | 386 |
multi fate stem cell | 5.07e-09 | 427 |
somatic stem cell | 8.16e-09 | 433 |
stem cell | 1.51e-08 | 441 |
CD34-positive, CD38-negative hematopoietic stem cell | 4.34e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.02e-75 | 76 |
bone element | 7.31e-70 | 82 |
skeletal element | 2.96e-63 | 90 |
immune system | 4.57e-61 | 93 |
hematopoietic system | 1.03e-57 | 98 |
blood island | 1.03e-57 | 98 |
skeletal system | 1.83e-56 | 100 |
hemolymphoid system | 6.29e-52 | 108 |
musculoskeletal system | 4.26e-34 | 167 |
lateral plate mesoderm | 4.17e-27 | 203 |
mesoderm | 1.68e-15 | 315 |
mesoderm-derived structure | 1.68e-15 | 315 |
presumptive mesoderm | 1.68e-15 | 315 |
connective tissue | 3.02e-11 | 371 |
stroma of bone marrow | 4.90e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.