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FFCP PHASE1:Mm9::chrX:16488592..16488604,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=17986|HGNC=|UniProt=P48744|association_with_transcript=285bp_to_NM_010883,uc009ssc.1_5end|description=CAGE_peak_1_at_Ndp_5end|id=chrX:16488592..16488604,-|ontology_enrichment_celltype=CL:0000221!6.04e-15!44;CL:0000133!6.04e-15!44;CL:0002319!3.19e-14!43;CL:0000540!1.10e-10!33;CL:0000047!1.10e-10!33;CL:0000031!1.10e-10!33;CL:0000404!1.10e-10!33;CL:0000055!5.07e-10!50;CL:0000393!2.73e-07!39;CL:0000211!2.73e-07!39|ontology_enrichment_celltype_v019_2=CL:0000221,1.64e-13,44;CL:0000133,1.64e-13,44;CL:0002319,2.34e-12,43;CL:0000540,4.31e-08,33;CL:0000047,4.31e-08,33;CL:0000031,4.31e-08,33;CL:0000404,4.31e-08,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!5.64e-20!102;UBERON:0000924!5.64e-20!102;UBERON:0006601!5.64e-20!102;UBERON:0000073!1.20e-18!75;UBERON:0001016!1.20e-18!75;UBERON:0001017!3.05e-17!73;UBERON:0005743!3.05e-17!73;UBERON:0002346!3.91e-13!71;UBERON:0003075!3.91e-13!71;UBERON:0007284!3.91e-13!71;UBERON:0000033!5.43e-10!63;UBERON:0001049!2.59e-09!52;UBERON:0005068!2.59e-09!52;UBERON:0006241!2.59e-09!52;UBERON:0007135!2.59e-09!52;UBERON:0000955!9.06e-08!50;UBERON:0006238!9.06e-08!50;UBERON:0000010!2.41e-07!11;UBERON:0002616!2.85e-07!49;UBERON:0003056!7.49e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.18e-20,75;UBERON:0004121,8.21e-19,95;UBERON:0000924,8.21e-19,95;UBERON:0006601,8.21e-19,95;UBERON:0001017,2.74e-18,73;UBERON:0010371,7.84e-12,73;UBERON:0002346,7.86e-11,64;UBERON:0003075,7.86e-11,64;UBERON:0007284,7.86e-11,64;UBERON:0000073,6.43e-09,54;UBERON:0001049,1.71e-08,52;UBERON:0005068,1.71e-08,52;UBERON:0006241,1.71e-08,52;UBERON:0007135,1.71e-08,52;UBERON:0000010,5.37e-08,11;UBERON:0003076,8.24e-08,12;UBERON:0003057,8.24e-08,12;UBERON:0010314,3.28e-07,92;UBERON:0010313,5.64e-07,3;UBERON:0002342,5.64e-07,3;UBERON:0002005,5.64e-07,3;UBERON:0005428,5.64e-07,3;UBERON:0005062,5.64e-07,3;UBERON:0000955,7.12e-07,47;UBERON:0006238,7.12e-07,47|phase1_expression=5.92550734287738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,4.39372365468944,0.388859798148567,0.279972843250725,1.43752564364972,0,0,0,0,0,0,0.404632921719196,1.5869729378161,0,0,0.889294796111139,0,0,0,1.49800055259202,1.92109152660777,0.518448061542388,0.135005938331691,0.420649922702764,0.856952953211411,3.09215957332259,0.489963196859816,0.287536413054709,0.919218786610021,0,1.78762273319263,1.68967186581868,0.131886287730194,0.457438218012048,0,1.3959149950069,1.12552522006336,1.68078072554491,1.47314292736834,1.13897344639282,0.745597783301202,2.95332153999418,4.38315048619356,0,0,0,0,0,0,0.842666520790511,0,0,0,4.22530259330042,0,0,0,0,0,0,0,0,0.29688427812965,0.693941307064543,0.304465478312141,0,0.301445281105245,0.352766121407114,0,0,0,0,0,0,0,0,2.92780797011547,3.14170060220183,0,0,0,0,1.9472783122627,0.457500602818626,0.753926112677186,1.04294592115366,2.04572365864264,2.28566849015516,2.43361894601636,1.83310854930569,0.622034853050465,0,0.420883711772948,0.130120442962704,0.229902104433473,0.360124259610698,0.452114453507145,0.408218994907967,1.15302348256365,1.3118241438362,0.776110112217047,0,0,0.351902248327898,0.219195732427575,1.39023624612799,0.348252166522167,0.411564272815887,0,0,0,0,0.207125772535502,0.234526059981096,0.540186184383045,0,0,0.308534225774757,0.232533944750408,0.536546802799238,0,0.16455984991348,0.164167464079095,0.162137619091711,0.146199987425332,0,0.134206418760372,1.68231958851302,1.54356918568927,0,0,0.213288250535234,0.232236671860439,0,0,0.22237804384487,0,0,0,0,0,0.19496408711912,0,0,0,0.569003702859245,0.228497025219458,0,0,0.775809948670503,0.210407459670956,2.84564417059158,0.147610147979602,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568474235311454,0.977789858652155,0.678980343100753,0,0.167506257441816,0,0.195133647857799,1.41871629695572,2.21464689648775,1.91345722388985,0.163863314715738,0.345369963731791,0.144649058581512,0,0,0,0,2.0871576698413,1.64096361229084,0,0.252470927204373,5.36363973007636,8.58965237452605,8.61693590931196,0.716906393857656,0.445597348164788,0.283076530788832,3.23848561339915,2.33804686329049,0.790575555893047,2.57057053137446,0.99358059645788,0.712262414669021,1.79175655288934,7.09371528781903,0,0,0.302323556964751,0,0,0,0,0,0,0.316036757935816,0,0,0,0.36012218806262,0.129358683782755,0,0.532020700926821,0,0.493647061806363,0,0,0,0,0.49465875882444,0.968786560175433,1.14594557363496,0.358117032009409,0,0,2.22510362412612,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0.134864346384821,0.165306911450672,0,0,0,0,0,0.827292452285488,1.94451188344048,1.93739735216597,3.54807863530634,3.63807439801837,1.3020438484395,0.419437377702843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0.375364950902364,2.74727436400898,0,0,0,0.920650473014354,1.71868654031819,1.71853182343688,0,0,0,1.35096360967266,0,0,0.415149390336707,0,0.170733605754134,0.243106717068294,0.838452650511929,0.367687016900028,0,0.618105171716683,0.320919209591815,0.505394423527595,0,0.565879024158229,0.37456602987953,0.512201219238954,0.516919220600519,0,0.579421629724277,0.192909220463705,0.412085900803307,0.441596760403192,0.342869252385415,0.70990322463735,0.953744759789284,0.290692833264657,0.470546902076653,0.0846146078916765,0.365855945745545,1.31534855718921,0.135804113845862,0,0.474540072496697,0.29551344712669,0.409231043169689,0.464810523557898,0,0.249810577937946,0.233931608445408,0.214871054048298,0.765153328275374,0,0.695603506861264|short_description=p1@Ndp}}
|EntrezGene=17986
|HGNC=
|UniProt=P48744
|association_with_transcript=285bp_to_NM_010883,uc009ssc.1_5end
|description=CAGE_peak_1_at_Ndp_5end
|id=chrX:16488592..16488604,-
|ontology_enrichment_celltype=CL:0000221!6.04e-15!44;CL:0000133!6.04e-15!44;CL:0002319!3.19e-14!43;CL:0000540!1.10e-10!33;CL:0000047!1.10e-10!33;CL:0000031!1.10e-10!33;CL:0000404!1.10e-10!33;CL:0000055!5.07e-10!50;CL:0000393!2.73e-07!39;CL:0000211!2.73e-07!39
|ontology_enrichment_celltype_v019_2=CL:0000221,1.64e-13,44;CL:0000133,1.64e-13,44;CL:0002319,2.34e-12,43;CL:0000540,4.31e-08,33;CL:0000047,4.31e-08,33;CL:0000031,4.31e-08,33;CL:0000404,4.31e-08,33
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!5.64e-20!102;UBERON:0000924!5.64e-20!102;UBERON:0006601!5.64e-20!102;UBERON:0000073!1.20e-18!75;UBERON:0001016!1.20e-18!75;UBERON:0001017!3.05e-17!73;UBERON:0005743!3.05e-17!73;UBERON:0002346!3.91e-13!71;UBERON:0003075!3.91e-13!71;UBERON:0007284!3.91e-13!71;UBERON:0000033!5.43e-10!63;UBERON:0001049!2.59e-09!52;UBERON:0005068!2.59e-09!52;UBERON:0006241!2.59e-09!52;UBERON:0007135!2.59e-09!52;UBERON:0000955!9.06e-08!50;UBERON:0006238!9.06e-08!50;UBERON:0000010!2.41e-07!11;UBERON:0002616!2.85e-07!49;UBERON:0003056!7.49e-07!49
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.18e-20,75;UBERON:0004121,8.21e-19,95;UBERON:0000924,8.21e-19,95;UBERON:0006601,8.21e-19,95;UBERON:0001017,2.74e-18,73;UBERON:0010371,7.84e-12,73;UBERON:0002346,7.86e-11,64;UBERON:0003075,7.86e-11,64;UBERON:0007284,7.86e-11,64;UBERON:0000073,6.43e-09,54;UBERON:0001049,1.71e-08,52;UBERON:0005068,1.71e-08,52;UBERON:0006241,1.71e-08,52;UBERON:0007135,1.71e-08,52;UBERON:0000010,5.37e-08,11;UBERON:0003076,8.24e-08,12;UBERON:0003057,8.24e-08,12;UBERON:0010314,3.28e-07,92;UBERON:0010313,5.64e-07,3;UBERON:0002342,5.64e-07,3;UBERON:0002005,5.64e-07,3;UBERON:0005428,5.64e-07,3;UBERON:0005062,5.64e-07,3;UBERON:0000955,7.12e-07,47;UBERON:0006238,7.12e-07,47
|phase1_expression=5.92550734287738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,4.39372365468944,0.388859798148567,0.279972843250725,1.43752564364972,0,0,0,0,0,0,0.404632921719196,1.5869729378161,0,0,0.889294796111139,0,0,0,1.49800055259202,1.92109152660777,0.518448061542388,0.135005938331691,0.420649922702764,0.856952953211411,3.09215957332259,0.489963196859816,0.287536413054709,0.919218786610021,0,1.78762273319263,1.68967186581868,0.131886287730194,0.457438218012048,0,1.3959149950069,1.12552522006336,1.68078072554491,1.47314292736834,1.13897344639282,0.745597783301202,2.95332153999418,4.38315048619356,0,0,0,0,0,0,0.842666520790511,0,0,0,4.22530259330042,0,0,0,0,0,0,0,0,0.29688427812965,0.693941307064543,0.304465478312141,0,0.301445281105245,0.352766121407114,0,0,0,0,0,0,0,0,2.92780797011547,3.14170060220183,0,0,0,0,1.9472783122627,0.457500602818626,0.753926112677186,1.04294592115366,2.04572365864264,2.28566849015516,2.43361894601636,1.83310854930569,0.622034853050465,0,0.420883711772948,0.130120442962704,0.229902104433473,0.360124259610698,0.452114453507145,0.408218994907967,1.15302348256365,1.3118241438362,0.776110112217047,0,0,0.351902248327898,0.219195732427575,1.39023624612799,0.348252166522167,0.411564272815887,0,0,0,0,0.207125772535502,0.234526059981096,0.540186184383045,0,0,0.308534225774757,0.232533944750408,0.536546802799238,0,0.16455984991348,0.164167464079095,0.162137619091711,0.146199987425332,0,0.134206418760372,1.68231958851302,1.54356918568927,0,0,0.213288250535234,0.232236671860439,0,0,0.22237804384487,0,0,0,0,0,0.19496408711912,0,0,0,0.569003702859245,0.228497025219458,0,0,0.775809948670503,0.210407459670956,2.84564417059158,0.147610147979602,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568474235311454,0.977789858652155,0.678980343100753,0,0.167506257441816,0,0.195133647857799,1.41871629695572,2.21464689648775,1.91345722388985,0.163863314715738,0.345369963731791,0.144649058581512,0,0,0,0,2.0871576698413,1.64096361229084,0,0.252470927204373,5.36363973007636,8.58965237452605,8.61693590931196,0.716906393857656,0.445597348164788,0.283076530788832,3.23848561339915,2.33804686329049,0.790575555893047,2.57057053137446,0.99358059645788,0.712262414669021,1.79175655288934,7.09371528781903,0,0,0.302323556964751,0,0,0,0,0,0,0.316036757935816,0,0,0,0.36012218806262,0.129358683782755,0,0.532020700926821,0,0.493647061806363,0,0,0,0,0.49465875882444,0.968786560175433,1.14594557363496,0.358117032009409,0,0,2.22510362412612,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0.134864346384821,0.165306911450672,0,0,0,0,0,0.827292452285488,1.94451188344048,1.93739735216597,3.54807863530634,3.63807439801837,1.3020438484395,0.419437377702843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0.375364950902364,2.74727436400898,0,0,0,0.920650473014354,1.71868654031819,1.71853182343688,0,0,0,1.35096360967266,0,0,0.415149390336707,0,0.170733605754134,0.243106717068294,0.838452650511929,0.367687016900028,0,0.618105171716683,0.320919209591815,0.505394423527595,0,0.565879024158229,0.37456602987953,0.512201219238954,0.516919220600519,0,0.579421629724277,0.192909220463705,0.412085900803307,0.441596760403192,0.342869252385415,0.70990322463735,0.953744759789284,0.290692833264657,0.470546902076653,0.0846146078916765,0.365855945745545,1.31534855718921,0.135804113845862,0,0.474540072496697,0.29551344712669,0.409231043169689,0.464810523557898,0,0.249810577937946,0.233931608445408,0.214871054048298,0.765153328275374,0,0.695603506861264
|short_description=p1@Ndp
}}

Revision as of 19:41, 14 September 2013

Short description:p1@Ndp
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Ndp_5end
Coexpression cluster:NA
Association with transcript: 285bp_to_NM_010883, uc009ssc.1_5end
EntrezGene:Ndp
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p1@Ndp

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G75.93
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.77
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B84.39
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.50
Mouse Microglia, donor2.CNhs12634.11736-123E81.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.52
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.09
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.29
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.79
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.69
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.46
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.68
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.75
Mouse Schwann, donor1.CNhs12507.11728-123D92.95
Mouse Schwann, donor2.CNhs12573.11746-123F94.38
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.84
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G64.23
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.93
cerebellum, neonate N30.CNhs11135.1395-42I23.14
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.95
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.75
cortex, adult.CNhs10473.12-14D51.04
cortex, neonate N30.CNhs11107.1392-42F22.05
diencephalon, adult.CNhs10482.20-12F22.29
diencephalon, neonate N30.CNhs11201.1388-42B22.43
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.83
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.62
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.41
eyeball, neonate N01.CNhs11140.1532-43E71.15
eyeball, neonate N02.CNhs11205.1551-44G81.31
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E71.39
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E81.68
hippocampus, neonate N00.CNhs11228.627-43G11.54
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D52.85
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.98
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E51.42
lung, neonate N07.CNhs11111.715-19A32.21
lung, neonate N10.CNhs11219.750-23E61.91
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C22.09
medulla oblongata, neonate N30.CNhs11200.1396-42A31.64
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E15.36
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E28.59
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E38.62
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D43.24
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.34
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I92.57
ovary, adult.CNhs10507.91-2I70.99
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I41.79
oviduct, adult pregnant day01.CNhs10500.988-6G67.09
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.97
skin, neonate N03.CNhs11215.662-22H31.15
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C92.23
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.83
testis, embryo E16.CNhs11033.470-26G51.94
testis, embryo E17.CNhs11029.486-18I51.94
testis, embryo E18.CNhs11027.503-18G53.55
testis, neonate N00.CNhs11189.1300-22B73.64
testis, neonate N07.CNhs11222.726-26I41.30
testis, neonate N10.CNhs11204.763-44D90.42
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E52.75
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.72
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.52
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.08
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
ectodermal cell1.64e-1344
neurectodermal cell1.64e-1344
neural cell2.34e-1243
neuron4.31e-0833
neuronal stem cell4.31e-0833
neuroblast4.31e-0833
electrically signaling cell4.31e-0833







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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