FFCP PHASE1:Hg19::chr1:1447517..1447556,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55210 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25567 | |||
|TSSclassifier=strong | |||
|UniProt=Q9NVI7,E9PDY1,D2K8Q1 | |||
|association_with_transcript=0bp_to_ENST00000378755,ENST00000378756,ENST00000378759,NM_001170535,NM_018188,uc001afz.1,uc001aga.1_5end | |||
|coexpression_cluster_id=C1171 | |||
|description=CAGE_peak_1_at_ATAD3A_5end | |||
|id=chr1:1447517..1447556,+ | |||
|ontology_enrichment_celltype=CL:0000548!1.36e-27!679;CL:0000004!1.36e-27!679;CL:0000255!1.36e-27!679;CL:0000012!7.19e-27!682;CL:0000066!1.35e-21!254;CL:0002321!4.90e-20!248;CL:0000220!8.24e-20!246;CL:0000144!7.89e-16!625;CL:0000055!1.49e-14!180;CL:0000003!1.82e-14!722;CL:0002371!6.95e-13!591;CL:0000222!1.68e-12!119;CL:0000063!1.78e-10!578;CL:0000183!3.46e-09!59;CL:0000393!3.33e-08!60;CL:0000211!3.33e-08!60;CL:0000187!1.00e-07!54;CL:0000680!1.30e-07!57;CL:0000056!1.30e-07!57;CL:0000355!1.30e-07!57;CL:0000192!9.20e-07!42;CL:0000514!9.20e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:1000449;5.42e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,8.36e-22,253;CL:0002321,3.29e-20,250;CL:0000222,1.29e-12,121;CL:0000393,6.17e-08,61;CL:0000211,6.17e-08,61;CL:0000187,1.88e-07,55;CL:0000680,2.36e-07,58;CL:0000056,2.36e-07,58;CL:0000355,2.36e-07,58;CL:1000449,5.18e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!2.07e-18!239;DOID:162!4.05e-18!235;DOID:0050686!3.78e-11!137;DOID:1240!7.73e-11!39;DOID:2531!1.02e-10!51;DOID:0060083!1.02e-10!51;DOID:8692!2.61e-09!31;DOID:0050687!1.81e-07!143;DOID:305!2.85e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:8692;3.70e-09;31!DOID:1240;4.69e-09;39!DOID:2531;5.73e-07;51!DOID:0060083;5.73e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:14566,2.08e-18,239;DOID:162,4.07e-18,235;DOID:0050686,3.79e-11,137;DOID:1240,7.73e-11,39;DOID:2531,1.02e-10,51;DOID:0060083,1.02e-10,51;DOID:8692,2.61e-09,31;DOID:0050687,1.82e-07,143;DOID:305,2.86e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0003914!6.36e-12!118;UBERON:0003104!9.88e-12!238;UBERON:0009142!9.88e-12!238;UBERON:0000490!3.33e-10!138;UBERON:0000486!4.54e-10!82;UBERON:0005256!6.40e-10!143;UBERON:0004290!2.20e-09!70;UBERON:0002100!8.80e-09!216;UBERON:0001637!1.25e-08!42;UBERON:0003509!1.25e-08!42;UBERON:0004572!1.25e-08!42;UBERON:0001981!1.38e-08!60;UBERON:0007500!1.38e-08!60;UBERON:0004537!1.38e-08!60;UBERON:0006965!1.38e-08!60;UBERON:0000119!1.51e-08!312;UBERON:0002049!1.73e-08!79;UBERON:0007798!1.73e-08!79;UBERON:0000055!2.18e-08!69;UBERON:0000914!5.86e-08!83;UBERON:0002329!5.86e-08!83;UBERON:0003077!5.86e-08!83;UBERON:0003059!5.86e-08!83;UBERON:0007282!5.86e-08!83;UBERON:0009618!5.86e-08!83;UBERON:0007285!5.86e-08!83;UBERON:0000483!5.98e-08!309;UBERON:0004872!1.40e-07!84;UBERON:0001134!4.29e-07!61;UBERON:0002036!4.29e-07!61;UBERON:0003082!4.29e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0003914;1.47e-07;74!UBERON:0006555;5.42e-07;15!UBERON:0004819;5.42e-07;15!UBERON:0001285;5.42e-07;15!UBERON:0007684;5.42e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000490,3.50e-12,148;UBERON:0003914,3.72e-12,117;UBERON:0007503,7.40e-12,78;UBERON:0002100,3.03e-10,199;UBERON:0000486,8.18e-10,83;UBERON:0005256,3.86e-09,122;UBERON:0002329,4.08e-09,71;UBERON:0003059,4.08e-09,71;UBERON:0007282,4.08e-09,71;UBERON:0004290,4.08e-09,71;UBERON:0009618,4.08e-09,71;UBERON:0007500,5.57e-09,59;UBERON:0001981,5.57e-09,59;UBERON:0004537,5.57e-09,59;UBERON:0006965,5.57e-09,59;UBERON:0003077,7.89e-09,72;UBERON:0007285,7.89e-09,72;UBERON:0002049,8.12e-09,78;UBERON:0007798,8.12e-09,78;UBERON:0003104,9.33e-09,160;UBERON:0009142,9.33e-09,160;UBERON:0000055,9.64e-09,68;UBERON:0001637,1.25e-08,42;UBERON:0003509,1.25e-08,42;UBERON:0004572,1.25e-08,42;UBERON:0007524,1.32e-08,73;UBERON:0000119,1.75e-08,309;UBERON:0000483,6.90e-08,306;UBERON:0004872,7.18e-08,83;UBERON:0004211,5.18e-07,15;UBERON:0009773,5.18e-07,15;UBERON:0001231,5.18e-07,15;UBERON:0001285,5.18e-07,15;UBERON:0007684,5.18e-07,15;UBERON:0004208,5.18e-07,15;UBERON:0001134,7.36e-07,62;UBERON:0002036,7.36e-07,62;UBERON:0003082,7.36e-07,62 | |||
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| |||
|short_description=p1@ATAD3A | |||
}} |
Revision as of 15:48, 10 January 2014
Short description: | p1@ATAD3A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ATAD3A_5end |
Coexpression cluster: | C1171_Alveolar_Renal_Bronchial_Mesenchymal_Smooth_Keratinocyte_embryonic |
Association with transcript: | 0bp_to_ENST00000378755, ENST00000378756, ENST00000378759, NM_001170535, NM_018188, uc001afz.1, uc001aga.1_5end |
EntrezGene: | ATAD3A |
HGNC: | 25567 |
UniProt: | Q9NVI7E9PDY1D2K8Q1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 8.36e-22 | 253 |
embryonic cell | 3.29e-20 | 250 |
mesodermal cell | 1.29e-12 | 121 |
electrically responsive cell | 6.17e-08 | 61 |
electrically active cell | 6.17e-08 | 61 |
muscle cell | 1.88e-07 | 55 |
muscle precursor cell | 2.36e-07 | 58 |
myoblast | 2.36e-07 | 58 |
multi-potent skeletal muscle stem cell | 2.36e-07 | 58 |
epithelial cell of nephron | 5.18e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 2.08e-18 | 239 |
cancer | 4.07e-18 | 235 |
organ system cancer | 3.79e-11 | 137 |
leukemia | 7.73e-11 | 39 |
hematologic cancer | 1.02e-10 | 51 |
immune system cancer | 1.02e-10 | 51 |
myeloid leukemia | 2.61e-09 | 31 |
cell type cancer | 1.82e-07 | 143 |
carcinoma | 2.86e-07 | 106 |