FFCP PHASE1:Hg19::chr1:38273528..38273541,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=127687 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24789 | |||
|TSSclassifier=strong | |||
|UniProt=E9PQ13,Q6ZSJ8 | |||
|association_with_transcript=55bp_to_NM_001142726,NM_198446,uc001ccd.2,uc010oii.1_5end | |||
|description=CAGE_peak_8_at_C1orf122_5end | |||
|id=chr1:38273528..38273541,+ | |||
|ontology_enrichment_celltype=CL:0000220!5.80e-19!246;CL:0002321!1.78e-18!248;CL:0000066!1.27e-17!254;CL:0000222!2.33e-12!119;CL:0000548!2.20e-11!679;CL:0000004!2.20e-11!679;CL:0000255!2.20e-11!679;CL:0000192!8.09e-11!42;CL:0000514!8.09e-11!42;CL:0000012!9.94e-11!682;CL:0000680!1.61e-10!57;CL:0000056!1.61e-10!57;CL:0000355!1.61e-10!57;CL:0000359!1.70e-10!32;CL:0000187!5.30e-10!54;CL:0000183!3.97e-09!59;CL:0000223!1.40e-08!59;CL:0000055!1.72e-08!180;CL:0000393!4.64e-08!60;CL:0000211!4.64e-08!60;CL:0000077!9.03e-08!19;CL:0002076!9.33e-08!43;CL:0000144!3.07e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.38e-11;32!CL:0000192;3.35e-10;43!CL:0000077;7.64e-10;19!CL:0002368;1.48e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,9.52e-17,250;CL:0000192,6.31e-14,43;CL:0000514,6.31e-14,43;CL:0000222,3.29e-13,121;CL:0000680,1.52e-12,58;CL:0000056,1.52e-12,58;CL:0000355,1.52e-12,58;CL:0000359,3.03e-12,32;CL:0000187,7.17e-12,55;CL:0000077,4.99e-10,19;CL:0000393,1.03e-09,61;CL:0000211,1.03e-09,61;CL:0000066,4.72e-09,253;CL:0002368,1.50e-07,13;CL:0002076,8.80e-07,42 | |||
|ontology_enrichment_development_v019=CL:0000514;3.35e-10;43!CL:0000355;5.97e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002100!4.90e-20!216;UBERON:0003104!1.03e-15!238;UBERON:0009142!1.03e-15!238;UBERON:0003914!1.08e-14!118;UBERON:0005256!7.31e-14!143;UBERON:0000490!1.68e-13!138;UBERON:0009569!2.31e-12!113;UBERON:0000486!5.00e-12!82;UBERON:0001637!2.47e-11!42;UBERON:0003509!2.47e-11!42;UBERON:0004572!2.47e-11!42;UBERON:0000926!5.03e-11!448;UBERON:0004120!5.03e-11!448;UBERON:0006603!5.03e-11!448;UBERON:0004872!2.20e-10!84;UBERON:0000466!8.11e-10!126;UBERON:0004119!9.28e-10!169;UBERON:0000925!9.28e-10!169;UBERON:0006595!9.28e-10!169;UBERON:0001048!1.14e-09!168;UBERON:0004290!7.82e-09!70;UBERON:0004573!8.60e-09!33;UBERON:0004571!8.60e-09!33;UBERON:0001134!1.00e-08!61;UBERON:0002036!1.00e-08!61;UBERON:0003082!1.00e-08!61;UBERON:0000475!1.09e-08!365;UBERON:0000914!1.90e-08!83;UBERON:0002329!1.90e-08!83;UBERON:0003077!1.90e-08!83;UBERON:0003059!1.90e-08!83;UBERON:0007282!1.90e-08!83;UBERON:0009618!1.90e-08!83;UBERON:0007285!1.90e-08!83;UBERON:0001981!2.12e-08!60;UBERON:0007500!2.12e-08!60;UBERON:0004537!2.12e-08!60;UBERON:0006965!2.12e-08!60;UBERON:0005911!2.35e-08!82;UBERON:0002385!3.33e-08!63;UBERON:0001015!3.33e-08!63;UBERON:0000383!3.33e-08!63;UBERON:0000481!3.67e-08!347;UBERON:0000483!4.20e-08!309;UBERON:0000119!7.91e-08!312;UBERON:0000464!1.10e-07!104;UBERON:0000055!2.23e-07!69;UBERON:0001007!3.16e-07!155;UBERON:0001555!3.16e-07!155;UBERON:0007026!3.16e-07!155;UBERON:0002049!3.96e-07!79;UBERON:0007798!3.96e-07!79;UBERON:0000915!4.60e-07!52 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;7.17e-07;42!UBERON:0003509;7.17e-07;42!UBERON:0004572;7.17e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,2.72e-18,199;UBERON:0000486,3.18e-14,83;UBERON:0005256,2.98e-13,122;UBERON:0000490,1.39e-11,148;UBERON:0007524,2.12e-11,73;UBERON:0007503,2.59e-11,78;UBERON:0003104,2.66e-11,160;UBERON:0009142,2.66e-11,160;UBERON:0002329,3.48e-11,71;UBERON:0003059,3.48e-11,71;UBERON:0007282,3.48e-11,71;UBERON:0004290,3.48e-11,71;UBERON:0009618,3.48e-11,71;UBERON:0001134,4.92e-11,62;UBERON:0002036,4.92e-11,62;UBERON:0003082,4.92e-11,62;UBERON:0003077,7.20e-11,72;UBERON:0007285,7.20e-11,72;UBERON:0003914,1.05e-10,117;UBERON:0002385,2.32e-10,64;UBERON:0001015,2.32e-10,64;UBERON:0000383,2.32e-10,64;UBERON:0001637,3.99e-10,42;UBERON:0003509,3.99e-10,42;UBERON:0004572,3.99e-10,42;UBERON:0009569,6.23e-10,112;UBERON:0004573,4.33e-08,33;UBERON:0004571,4.33e-08,33;UBERON:0004872,9.86e-08,83;UBERON:0007500,5.77e-07,59;UBERON:0001981,5.77e-07,59;UBERON:0004537,5.77e-07,59;UBERON:0006965,5.77e-07,59;UBERON:0000483,8.10e-07,306;UBERON:0010188,8.15e-07,6;UBERON:0002539,8.15e-07,6;UBERON:0008816,8.15e-07,6 | |||
|phase1_expression=3.08853244759946,0.214100523890983,1.40954404095971,1.0007329835313,1.34088328328186,2.61701557230111,2.53299878168311,5.68547886084148,0.522371256399677,1.22866968250754,2.79120467188971,2.40285509343189,1.84636884759917,0,0,0.672325146451775,1.20538905604795,1.46062018077475,1.46379839637152,0.246242116153576,0,0.626909442956176,0.286235987131057,0,0.376627918784408,0,0,0.0787107813136792,0,0,0,5.51652734687356,3.31326510656075,2.21852406100073,0.154934401160603,0,0.293600439334847,0,0,0.217010870715852,0,0,0,0,0,0.242584061187816,0,0.411167888021826,0.929119112685311,0,0,0,0.689491361473237,0,0,0,0.272906150057846,0.224723484445085,0,0.320929027076094,0,0,0,0,0,0.56738522469114,0.622822248995575,0,0,0,0,0.736555271975129,0.632924774881769,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0.393010762749165,0.205601498999509,0,0,0,0,0,0,0,0,0.384273959177026,0.130059347559878,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0.950452044448374,0,0,0,0,0,0.201606743224732,0.267440195783507,0.144824403882799,4.87613732627923,2.68280343881454,2.17366355134002,1.0843174571537,0,0.869079113764942,0,1.45990461090791,0,0.443458794925128,0.43917392846563,0.261958150995425,2.18577172975525,1.48313777113772,1.29818957461873,1.91542711029194,0.664789802594326,0,0,0,0.198762407366705,0.860234595106124,0.694281003215189,0,0.838998872419812,0.550236083880135,1.04497483268405,0.258416759169329,0,0,0,0,0.488124115096339,0.367663080345869,1.62028389576352,0.446498641420399,0.22452937262617,1.12611480483322,0,0.949265659568129,0.366403487860815,0,0,0.872188104285069,1.49091585508596,1.77282716330412,0.926864265692532,0.286836620748814,0.354668382198357,3.92474320099615,2.1349799145941,2.4666754841716,0.933633106199299,0.404132016209064,0.817309515567294,0.151357427644931,1.15235184896,0,0.312160076830321,1.1409436430889,0.597794722207204,0.117434498643765,0,0,0.408308342509787,0,0,1.18800285728205,0.989067717114227,0.910161361938026,2.15585442544872,0.168336113954066,0,0.554128230968366,0,0.919463387397059,0.600952235626387,2.7223723958405,0.179389635688862,0,0.423863802319124,0,0.103052529238439,1.28820270022815,0,0.337552664482532,0.487185025805993,0,0.460249493211497,0,0.355009592516614,0.403008392910561,0.508681776931463,3.09217365061275,1.90922284413584,3.15485054927904,0.121973706129595,0,0,0,0.252320850875628,0,1.56449532329816,2.57296375277154,1.38134921352481,0.928735856063958,0.721879481669586,0.828147600278907,0.674338760312407,0.964044119533928,1.43382164552112,0.435758888184812,0.71181185733329,1.61797569792197,1.76599318612811,0,0,4.20725321410337,3.2925920906512,2.94017422771084,10.1404027857465,0,1.77236972004421,0,0.122988438543114,1.54411029268673,0.98775256867763,3.37205259772859,2.11110842064425,0,0,0,0,0,2.46558257895225,0.577465791044295,0.925971025153221,0,1.58040879591855,0,0.492434012174795,1.8720341211139,1.18904929830983,10.3107217385455,2.35174979478403,1.84307626415102,0.53735113621709,0.581267877027924,2.68367875415648,0,0.088048434013226,0,0,0,0.126995788584338,0.381988425558278,0,0,0.411309970813294,0.600686115687835,0,0.112131084345361,0,0.22001485746285,2.32689088364,0,2.535908257668,0.26593811658487,3.12022310734098,0.257207374262142,0,0,0.428933980974443,0,0,0.325736184293735,0.710783897485092,0,2.41151501647669,3.48613383440118,3.99891964728228,0,0,0,0.958499421966331,0,0,2.60606352001643,1.2328579353023,0.179060963239896,0,0,0,0.128343036279748,0.254094624222463,0,0,0,0,0,0,0,0.36807447515742,0,0.542530047399471,1.24782516918484,1.60586089917446,1.57702415033935,1.17141414992713,0.300946099727719,2.27407504055985,3.10419213877515,0.664225598535437,2.02806085395873,0.781952530212746,0,0,0,0,0,1.21251028578504,0,0.907170879989041,2.48107807818777,0.767309866440312,2.52594084989766,2.30650468660262,1.53512174720011,3.53878626515936,0,1.07946785661859,2.48586415438378,0.492762936082855,1.03850885836724,0.929683027679674,1.57117284469109,3.60911646545913,1.10497186723076,1.03333003348146,2.00300284807389,0.917870904715969,0,0,0.784349769176855,1.46139224653261,0.211103257785751,0,0.340187410553031,0.647747748306418,1.54227252690289,1.08378575017541,0.501689773854853,1.78413391131527,3.3243040357149,0.447749509444357,0,0,0.256450125116389,0.984043937099117,0,0.618246069886334,0,0,0.574265537996172,1.30012049207304,1.6068392984416,0.193341436584244,0,0.307007349452259,0.137836572484531,0.107420244868274,0.435050081742686,0.170453254832202,0.979352392114111,1.98341898433174,2.30628080838127,1.40373983744043,1.31505115112215,3.253918845081,0.31481234683064,2.0911118104818,1.23213432070436,2.66153015158511,1.73986598415015,1.8532421910392,1.86062352764589,0,0.632758849437452,2.85945290885737,2.04718233049067,0,0.636406495851874,1.56989728039846,1.2591072030832,1.37268514868027,1.06031162111118,4.24583211303964,9.5106192703805,2.10629228119491,2.43816869544795,1.46228093778771,1.05650146756755,0,1.41405431953713,2.26016233240486,3.85955740482287,3.980633851447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| |||
|short_description=p8@C1orf122 | |||
}} |
Revision as of 17:55, 10 January 2014
Short description: | p8@C1orf122 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_C1orf122_5end |
Coexpression cluster: | NA |
Association with transcript: | 55bp_to_NM_001142726, NM_198446, uc001ccd.2, uc010oii.1_5end |
EntrezGene: | C1orf122 |
HGNC: | 24789 |
UniProt: | E9PQ13Q6ZSJ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 9.52e-17 | 250 |
smooth muscle cell | 6.31e-14 | 43 |
smooth muscle myoblast | 6.31e-14 | 43 |
mesodermal cell | 3.29e-13 | 121 |
muscle precursor cell | 1.52e-12 | 58 |
myoblast | 1.52e-12 | 58 |
multi-potent skeletal muscle stem cell | 1.52e-12 | 58 |
vascular associated smooth muscle cell | 3.03e-12 | 32 |
muscle cell | 7.17e-12 | 55 |
mesothelial cell | 4.99e-10 | 19 |
electrically responsive cell | 1.03e-09 | 61 |
electrically active cell | 1.03e-09 | 61 |
epithelial cell | 4.72e-09 | 253 |
respiratory epithelial cell | 1.50e-07 | 13 |
endo-epithelial cell | 8.80e-07 | 42 |