FFCP PHASE1:Hg19::chr1:156830678..156830696,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4914 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8031 | |||
|TSSclassifier=strong | |||
|UniProt=P04629 | |||
|association_with_transcript=0bp_to_ENST00000358660,ENST00000524377_5end | |||
|description=CAGE_peak_2_at_NTRK1_5end | |||
|id=chr1:156830678..156830696,+ | |||
|ontology_enrichment_celltype=CL:0000080!4.03e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000333;1.70e-17;5!CL:0000764;7.91e-08;2!CL:0000558;7.91e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,2.97e-08,108;CL:0000049,2.97e-08,108;CL:0000764,5.03e-08,2;CL:0000765,5.03e-08,2;CL:0000050,5.03e-08,2;CL:0000038,5.03e-08,2;CL:0000558,5.03e-08,2;CL:0000547,5.03e-08,2;CL:0000549,5.03e-08,2;CL:0000550,5.03e-08,2;CL:0000552,5.03e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8692!2.31e-09!31;DOID:1036!8.06e-09!8;DOID:171!2.49e-08!10;DOID:1240!5.89e-08!39;DOID:2531!8.16e-07!51;DOID:0060083!8.16e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;4.27e-19;31!DOID:171;3.18e-16;10!DOID:1036;4.61e-16;8!DOID:169;1.57e-14;6!DOID:1240;1.81e-11;39!DOID:3095;6.03e-09;22!DOID:2994;6.03e-09;22!DOID:2531;2.28e-07;51!DOID:0060083;2.28e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.58e-19,31;DOID:171,2.74e-16,10;DOID:1036,4.45e-16,8;DOID:1240,7.96e-15,39;DOID:169,1.69e-14,6;DOID:2531,1.46e-10,51;DOID:0060083,1.46e-10,51;DOID:3095,5.64e-09,22;DOID:2994,5.64e-09,22 | |||
|ontology_enrichment_uberon=UBERON:0000178!4.08e-10!15;UBERON:0000179!4.08e-10!15;UBERON:0000463!4.08e-10!15;UBERON:0007023!1.06e-09!115;UBERON:0000013!1.00e-07!5;UBERON:0002410!1.00e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;1.70e-17;5!UBERON:0002410;1.70e-17;5!UBERON:0000178;4.20e-10;15!UBERON:0000179;4.20e-10;15!UBERON:0000463;4.20e-10;15!UBERON:0000010;1.40e-09;8!UBERON:0001905;1.51e-08;2!UBERON:0002757;1.51e-08;2!UBERON:0010134;1.51e-08;2!UBERON:0005408;1.51e-08;2!UBERON:0001899;1.51e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,1.86e-17,5;UBERON:0002410,1.86e-17,5;UBERON:0000178,4.57e-10,15;UBERON:0000179,4.57e-10,15;UBERON:0000463,4.57e-10,15;UBERON:0000010,1.47e-09,8;UBERON:0001905,1.54e-08,2;UBERON:0002757,1.54e-08,2;UBERON:0010134,1.54e-08,2;UBERON:0005408,1.54e-08,2;UBERON:0001899,1.54e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.7677496897116,1.91914699048606,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0.251248665256743,0,0.217188844705117,0,0.368277635987565,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64342657158052,1.68152568894461,1.05353633910031,0,0,0,0,0,0,0,0.111410456885174,0.294605907474837,0,0,0.128091319725675,0,2.30213066445147,1.38175008892924,1.44901542867526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.403213486449465,0.534880391567015,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,1.12135520028461,0,0.24666754841716,0,0,0,0.756787138224657,1.15235184896,0.468642863667593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0.232387885739037,0.829288440122964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.6184883705891,21.7479632012668,0.414656231081544,0.576479813667846,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0.197030760201927,0,0.256686072559497,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0.902838299183157,6.82222512167955,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.213455115606889,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97333888981341,3.66009631434861,0,0,0,0,0.27470839445503,0.165018999841176,0,0,0,0.096670718292122,0,0,0,0.107420244868274,0.145016693914229,0,1.69160867728801,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0.744316738719335,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,3.82318603571188,1.70894156152249,0.476463550915578,0,1.29694662238543,0.540031437238115,0,0,0,0,0,0,0.0711418433484141,0,1.79621434289535,0,0.211673582723883,0,0.842391534340376,0,0,0,1.35433422241283,0,0,0,0,0,0,0,0,25.6133679983623,1.23087398947712,9.19549306818343,3.3307196799782,12.6888304579065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,1.37897349296586,2.91604613383254,0.173624994933292,0.885741385813839,0.964771509003264,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,17.1108479470577,21.6075186470203,2.03036094555463,2.94093801476609,3.5242533264927,0.75901493089674,15.4168481610967,0,0,0,0,0,0.176915129006678,0,2.6686901581256,2.22415090103705,1.56632924258183,0,0,0.234264445725339,0.182454789215666,0,0,0,0,0.30607276163049,0.126373159256976,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0.0969890164884194,0,0.677942222341597,0,0,0,0,0.0801588202515337,1.06726497369676,0,0,0,0.857974989309823,0,0,0,0,0,0,0,1.20084057741958,0.410716136675979,0,0,0,0.279282401272254,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0.35857467866569,0,0,0,0,0,0,0,0,13.9557285273876,0,0,0,0,1.0342636508924,0,0,0,0.640724475406168,0,0.414239055347196,0,0.988058159489721,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0.443716206147409,1.42821726765182,3.18201860353331,0,0.151649117541648,0,0.235265819698172,0.936669811613763,0.28984205722165,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,8.31313413473736,21.5649622793364,1.88719130227076,2.29340240203229,0.33946505990805,1.91317428091515,3.34626563499306,1.11728983594649,0,0.47317047000752,0,0,0,0.192687675289379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0.202612753855184,0,0,0,0.546974809018219,0,0,0,0,9.64263304580916,13.451348888753,0,0,0,0.115233987555779,0,7.88448902531248,0,0,0,0.313972371402056,0.314231179832004,0,0,0,0,0.285906176706625,5.53047641064543,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0,0,0.485710993059139,0,6.16747403000242,0,0,1.97892930141772,0.301925687133347,0.154348316215889,0.218559560503957,0,0.490296643507811,0,0.588925401344836,0.297046400327086,1.6906229103336,0,0,0.45120521581504,0,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0.462175628631418,0,0,0,12.4164530991208,0,0,0.275684698604535,0,0.606229585745915,0.535928260312357,0,0.413731983447581,0,0,0.0645889098360061,0.806971285846153,0,0,0,0,0,0.134704106029175,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,0.402547587182052,0 | |||
|short_description=p2@NTRK1 | |||
}} |
Revision as of 21:31, 10 January 2014
Short description: | p2@NTRK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NTRK1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000358660, ENST00000524377_5end |
EntrezGene: | NTRK1 |
HGNC: | 8031 |
UniProt: | P04629 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 2.97e-08 | 108 |
common myeloid progenitor | 2.97e-08 | 108 |
erythroid lineage cell | 5.03e-08 | 2 |
erythroblast | 5.03e-08 | 2 |
megakaryocyte-erythroid progenitor cell | 5.03e-08 | 2 |
erythroid progenitor cell | 5.03e-08 | 2 |
reticulocyte | 5.03e-08 | 2 |
proerythroblast | 5.03e-08 | 2 |
basophilic erythroblast | 5.03e-08 | 2 |
polychromatophilic erythroblast | 5.03e-08 | 2 |
orthochromatic erythroblast | 5.03e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 1.86e-17 | 5 |
autonomic nervous system | 1.86e-17 | 5 |
blood | 4.57e-10 | 15 |
haemolymphatic fluid | 4.57e-10 | 15 |
organism substance | 4.57e-10 | 15 |
peripheral nervous system | 1.47e-09 | 8 |
pineal body | 1.54e-08 | 2 |
regional part of epithalamus | 1.54e-08 | 2 |
secretory circumventricular organ | 1.54e-08 | 2 |
circumventricular organ | 1.54e-08 | 2 |
epithalamus | 1.54e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.58e-19 | 31 |
neuroectodermal tumor | 2.74e-16 | 10 |
chronic leukemia | 4.45e-16 | 8 |
leukemia | 7.96e-15 | 39 |
neuroendocrine tumor | 1.69e-14 | 6 |
hematologic cancer | 1.46e-10 | 51 |
immune system cancer | 1.46e-10 | 51 |
germ cell and embryonal cancer | 5.64e-09 | 22 |
germ cell cancer | 5.64e-09 | 22 |