FFCP PHASE1:Hg19::chr1:203152777..203152814,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C283 | |||
|description=CAGE_peak_at_chr1:203152777..203152814,+ | |||
|id=chr1:203152777..203152814,+ | |||
|ontology_enrichment_celltype=CL:0000153!6.80e-14!9;CL:0000447!6.80e-14!9;CL:0000235!4.65e-12!10;CL:0000667!8.95e-10!6;CL:0000058!8.95e-10!6;CL:0000138!8.95e-10!6;CL:0000327!1.21e-08!14;CL:0000188!1.71e-08!9;CL:0000499!3.52e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0000235;1.27e-37;6!CL:0000153;2.61e-36;9!CL:0000447;2.61e-36;9!CL:0000138;1.09e-24;6!CL:0000327;1.17e-21;15!CL:0000499;4.19e-20;28!CL:0002540;2.62e-14;6!CL:0000135;1.76e-13;3!CL:0000388;1.76e-13;3!CL:0000214;2.32e-13;3!CL:0002092;8.50e-09;10!CL:0000151;5.40e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,1.59e-37,6;CL:0000153,2.53e-36,9;CL:0000447,2.53e-36,9;CL:0000058,1.13e-24,6;CL:0000138,1.13e-24,6;CL:0000327,1.14e-21,15;CL:0000499,4.19e-20,28;CL:0002540,2.39e-14,6;CL:0000135,1.81e-13,3;CL:0000388,1.81e-13,3;CL:0000214,2.18e-13,3;CL:0002092,8.05e-09,10;CL:0000151,8.88e-09,36;CL:0000134,3.59e-07,354;CL:0000219,3.62e-07,386;CL:0002320,5.73e-07,361 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5662;2.87e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:5662,2.74e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0006331!4.57e-10!3;UBERON:0002148!2.89e-07!2;UBERON:0009662!2.89e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;1.76e-13;3!UBERON:0000043;1.76e-13;3!UBERON:0007845;1.76e-13;3!UBERON:0006915;2.32e-13;3!UBERON:0007616;2.32e-13;3!UBERON:0002217;2.32e-13;3!UBERON:0002018;2.32e-13;3!UBERON:0001282;9.38e-11;1!UBERON:0009842;9.38e-11;1!UBERON:0003704;9.38e-11;1!UBERON:0001171;9.38e-11;1!UBERON:0001172;9.38e-11;1!UBERON:0002371;2.07e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,1.81e-13,3;UBERON:0000043,1.81e-13,3;UBERON:0007845,1.81e-13,3;UBERON:0006915,2.18e-13,3;UBERON:0007616,2.18e-13,3;UBERON:0002217,2.18e-13,3;UBERON:0002018,2.18e-13,3;UBERON:0001282,8.95e-11,1;UBERON:0009842,8.95e-11,1;UBERON:0003704,8.95e-11,1;UBERON:0001171,8.95e-11,1;UBERON:0001172,8.95e-11,1;UBERON:0001434,3.75e-09,100;UBERON:0002371,2.91e-08,76;UBERON:0001474,1.42e-07,82;UBERON:0002204,5.06e-07,167;UBERON:0004765,8.47e-07,90 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1686349143074,4.51204119572301,9.12533069453189,0,6.32625331393427,0,0,0,0,0,0,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,5.38209809820247,4.01304138179566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0.258543431515556,0,0.845302752556,0,0,0,0,0,0,0,0,0.65147236858747,0,0,0,0,0,3.64871341923571,1.00451418286425,6.32501818449095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,2.0694614258501,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462145851343933,0.921022048356777,0,0,0.290033387828457,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.8775657531575,4.93942339439853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.921722292925374,1.3420566473545,0.333698283423817,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361789315876224,0,0,0,0,0,0,0,9.3432485794541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,0,0,0,0,0,0,0,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.864221491201268,0,0,0,0,0,0.732761168390412,0,0.129282956361551,0.66116300871345,0,0,0.106787412567695,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,3.78806010550178,24.6536543717524,2.66943366478961,0,0.151230923763239,0,0,0,0,0,0,0,0,0.450772826991655,0,0,0,0,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22934412268644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.801711364730253,0.207216164163037,0,0,0,0.118332000730565,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286679166302903,0,0,0,0,5.20793025433452,72.0993980665013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:203152777..203152814,+ | |||
}} |
Revision as of 23:28, 10 January 2014
Short description: | p@chr1:203152777..203152814, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:203152777..203152814, + |
Coexpression cluster: | C283_tenocyte_Chondrocyte_mesenchymal_Macrophage_pleomorphic_Synoviocyte_cholangiocellular |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 1.59e-37 | 6 |
GAG secreting cell | 2.53e-36 | 9 |
carbohydrate secreting cell | 2.53e-36 | 9 |
chondroblast | 1.13e-24 | 6 |
chondrocyte | 1.13e-24 | 6 |
extracellular matrix secreting cell | 1.14e-21 | 15 |
stromal cell | 4.19e-20 | 28 |
mesenchymal stem cell of the bone marrow | 2.39e-14 | 6 |
fibrocyte | 1.81e-13 | 3 |
tendon cell | 1.81e-13 | 3 |
synovial cell | 2.18e-13 | 3 |
bone marrow cell | 8.05e-09 | 10 |
secretory cell | 8.88e-09 | 36 |
mesenchymal cell | 3.59e-07 | 354 |
motile cell | 3.62e-07 | 386 |
connective tissue cell | 5.73e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 1.81e-13 | 3 |
tendon | 1.81e-13 | 3 |
regular connective tissue | 1.81e-13 | 3 |
stratified squamous epithelium | 2.18e-13 | 3 |
layer of synovial tissue | 2.18e-13 | 3 |
synovial joint | 2.18e-13 | 3 |
synovial membrane of synovial joint | 2.18e-13 | 3 |
intralobular bile duct | 8.95e-11 | 1 |
acinus | 8.95e-11 | 1 |
intrahepatic bile duct | 8.95e-11 | 1 |
portal lobule | 8.95e-11 | 1 |
hepatic acinus | 8.95e-11 | 1 |
skeletal system | 3.75e-09 | 100 |
bone marrow | 2.91e-08 | 76 |
bone element | 1.42e-07 | 82 |
musculoskeletal system | 5.06e-07 | 167 |
skeletal element | 8.47e-07 | 90 |
Ontology term | p-value | n |
---|---|---|
pleomorphic carcinoma | 2.74e-10 | 1 |