FFCP PHASE1:Hg19::chr1:233749739..233749761,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3775 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6272 | |||
|TSSclassifier=strong | |||
|UniProt=O00180 | |||
|association_with_transcript=0bp_to_ENST00000366621,NM_002245,uc010pxo.1_5end | |||
|description=CAGE_peak_4_at_KCNK1_5end | |||
|id=chr1:233749739..233749761,+ | |||
|ontology_enrichment_celltype=CL:0000066!3.55e-13!254;CL:0002076!9.49e-10!43 | |||
|ontology_enrichment_celltype_v019=CL:0002076;6.62e-09;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.37e-18,253;CL:0002076,3.06e-12,42;CL:0000223,7.98e-08,58 | |||
|ontology_enrichment_development_v019=UBERON:0008947;3.50e-07;29 | |||
|ontology_enrichment_disease=DOID:305!9.67e-13!106;DOID:0050687!3.26e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:1749;2.30e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.17e-16,106;DOID:0050687,1.48e-10,143;DOID:1749,3.72e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0000481!7.98e-18!347;UBERON:0000064!3.37e-17!219;UBERON:0004119!1.13e-14!169;UBERON:0000925!1.13e-14!169;UBERON:0006595!1.13e-14!169;UBERON:0007023!5.65e-14!115;UBERON:0000922!8.36e-12!612;UBERON:0001007!1.09e-11!155;UBERON:0001555!1.09e-11!155;UBERON:0007026!1.09e-11!155;UBERON:0001004!1.46e-11!72;UBERON:0000477!2.68e-10!286;UBERON:0002050!1.10e-09!605;UBERON:0005423!1.10e-09!605;UBERON:0000923!1.28e-09!604;UBERON:0005291!1.28e-09!604;UBERON:0006598!1.28e-09!604;UBERON:0002532!1.28e-09!604;UBERON:0004111!1.34e-09!241;UBERON:0004921!1.38e-09!129;UBERON:0004185!1.38e-09!129;UBERON:0000065!1.77e-09!53;UBERON:0000468!2.33e-09!659;UBERON:0000077!2.60e-09!130;UBERON:0008947!3.99e-09!38;UBERON:0003258!3.99e-09!38;UBERON:0000062!4.34e-09!511;UBERON:0001049!2.12e-08!57;UBERON:0005068!2.12e-08!57;UBERON:0006241!2.12e-08!57;UBERON:0007135!2.12e-08!57;UBERON:0003104!2.33e-08!238;UBERON:0009142!2.33e-08!238;UBERON:0000475!2.87e-08!365;UBERON:0000467!3.10e-08!625;UBERON:0000480!4.50e-08!626;UBERON:0000464!6.43e-08!104;UBERON:0000033!1.72e-07!123;UBERON:0000072!1.73e-07!46;UBERON:0001041!2.06e-07!98;UBERON:0001869!2.31e-07!32;UBERON:0002780!2.35e-07!41;UBERON:0001890!2.35e-07!41;UBERON:0006240!2.35e-07!41;UBERON:0001893!2.62e-07!34;UBERON:0000153!3.99e-07!129;UBERON:0007811!3.99e-07!129;UBERON:0002616!4.08e-07!59;UBERON:0003080!6.92e-07!42;UBERON:0000483!7.50e-07!309;UBERON:0002791!8.42e-07!33;UBERON:0002020!9.58e-07!34;UBERON:0003528!9.58e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0000065;9.82e-08;44!UBERON:0002619;1.31e-07;22!UBERON:0001737;1.71e-07;9!UBERON:0001557;1.71e-07;9!UBERON:0001869;2.87e-07;32!UBERON:0000072;4.82e-07;37!UBERON:0001950;6.68e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,4.05e-11,160;UBERON:0000925,4.05e-11,160;UBERON:0006595,4.05e-11,160;UBERON:0011216,4.95e-10,223;UBERON:0000065,6.83e-09,54;UBERON:0001004,1.00e-08,74;UBERON:0008947,1.29e-08,38;UBERON:0003258,1.29e-08,38;UBERON:0001007,2.88e-08,145;UBERON:0001555,2.88e-08,145;UBERON:0007026,2.88e-08,145;UBERON:0001869,5.64e-08,32;UBERON:0007023,8.73e-08,114;UBERON:0001737,1.48e-07,9;UBERON:0000073,1.66e-07,53;UBERON:0002616,1.66e-07,53;UBERON:0000072,2.08e-07,47;UBERON:0002619,2.42e-07,22;UBERON:0001893,3.79e-07,34;UBERON:0002791,6.81e-07,32 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.422863212287913,1.0007329835313,0,1.74467704820074,0,0,0,2.45733936501509,2.79120467188971,3.49506195408276,1.84636884759917,1.36142988256051,0.662794751455832,0,0.602694528023977,1.46062018077475,2.43966399395253,0.61560529038394,0.204000691244253,0.313454721478088,0,0.410623275218653,0.376627918784408,0.687720651731561,1.06730766284929,0.708397031823113,0,0,0.154816123316076,2.75826367343678,3.614471025339,1.47901604066715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0.222820913770347,0,0,0,0.25618263945135,0.260118695119756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,2.00535164254356,1.30361867064741,0,2.91980922181582,0.0945348171640679,0.443458794925128,0.351339142772504,0.458426764241994,1.09288586487763,1.48313777113772,0,0,0,0.476981248610684,0.571994910780128,1.11437250398869,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0.22452937262617,0.225222960966644,0,0,0.366403487860815,0,0,2.18047026071267,0,0.12663051166458,0.264818361626438,0.286836620748814,0.354668382198357,1.12135520028461,0,0.49333509683432,0,0,0.326923806226917,0,0,0,0.312160076830321,0.570471821544449,0.149448680551801,0.469737994575059,0,0.140450806702248,0.61246251376468,0.61417158655884,0.103325781175765,0,0.494533858557114,0,1.43723628363248,0,0,0,0,0.30648779579902,1.20190447125277,0.340296549480063,0,0,0,0,0,0,0,0,0.389748020644795,0,0,0,0,0,0,2.51239109112286,3.00020732649918,1.72082757233402,3.04934265323988,3.04818467139416,3.95059405756363,2.48786532036889,4.03713361401005,1.82488679537915,0,0,0,0,0.721879481669586,3.07597680103594,2.36018566109342,2.16909926895134,1.65440959098591,2.83243277320128,2.60997681022206,2.42696354688296,2.35465758150415,2.69323009862473,0,0,2.057870056657,0,0,0,0.590789906681404,0,0.245976877086227,0.343135620597051,1.20725313949488,3.37205259772859,5.12697759299317,1.29623823221941,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,1.87467667973554,2.18376766658517,1.84307626415102,0.806026704325635,1.45316969256981,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0.129271715757778,3.57656445851882,0,0.26593811658487,0,1.28603687131071,0,0.532844358032199,0,1.08524321078289,0,0,0.355391948742546,0,0.301439377059586,5.22920075160176,0.899756920638513,0,0,0,0,0,0,0.289562613335158,0.410952645100767,0.537182889719687,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,1.10422342547226,0,1.08506009479894,0.207970861530807,0,0,0,0.601892199455438,2.27407504055985,1.03473071292505,0,0.921845842708516,0.173767228936166,0,0,0,0,0,2.12189300012382,0,3.32629322662648,0.496215615637554,0,0.280660094433074,0.128139149255701,0.511707249066704,0.321707842287215,0,0,0,0,0,0,0,4.0101294060657,4.60404944679482,0.114814448164607,0.182091168006717,0.524497659837696,1.80479845162965,1.38627606787947,0,1.46139224653261,1.58327443339314,0,0,0,0,0.541892875087706,0.501689773854853,3.56826782263054,2.49322802678617,0.671624264166535,0,0,0.512900250232778,0.984043937099117,0,0.103041011647722,0,0,1.14853107599234,2.60024098414608,0,0.290012154876366,0.154048617114644,0.15350367472613,0.551346289938122,0.537101224341368,0.435050081742686,0.340906509664404,0.267096106940212,2.31398881505369,2.69066094311149,2.4246415373971,2.32662895967765,0.464845549297286,2.51849877464512,0.6970372701606,0,0.532306030317022,0.869932992075073,0.55597265731176,0,0,0,0,0.255897791311334,0.855877976067841,0,2.35484592059769,0.179872457583315,0,0.117812402345686,0.606547444719948,0,0.421258456238981,0.975267478179181,2.92456187557541,0,0.409499734223957,0.141405431953713,0,1.65409603063837,1.32687795048244,1.75380354101505,0.578775534266688,0.655894752046633,0,0.30982349809975,0,0.430234056612155,0.88424136911809,0.35667105148125,0.709522128141196,1.68886108238131,1.97576935775941,0,0.349934720244983,0.962221127255121,1.34060455107157,1.08890984861323,0.188287601553558,4.3050537267123,3.36942951335251,2.66058092122005,2.29723400206959,0.507447609232169,0,0,0,0.411362273086194,0,0,0.79312517629427,0,1.92495971052672,2.69544237579135,0,0,0,2.07254154547469,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0.223676107892416,0.500547425135725,0,0,1.23087398947712,1.08182271390393,0,2.81974010175699,5.98849729306303,0,0,0,0.284136146806413,8.35605696581915,1.18785872333055,6.14321404198464,0.994147647766298,1.54736358051564,1.11308705022906,0.329607748453519,0,0.597743964753209,0.828851746593443,0.503865495708552,0,1.6001024709939,0,2.87578723671446,9.66714343248289,0,0.986434056369336,0,0,4.84666373047609,2.41197055220813,0,1.04171104434093,3.84823999983261,0,2.84483620713749,1.01701460117107,3.07303986298317,0,0,0.173624994933292,1.77148277162768,3.49729672013683,4.5774520895125,6.41359707601103,6.50204761697804,3.51016635446356,1.52513848926586,1.53366118706464,0.769502585037971,0.683652335082007,0.922255617552241,3.59030577639089,2.28159481036217,2.55200927785536,1.74035427463538,2.13213910407454,0,0,0,0.902382642468723,0.392125068635479,0.167821586975843,0.189753732724185,0,0.210998064528027,0.652931232636591,0,0,1.99052386215701,1.59223616106011,3.05515072466813,0.296521128680622,1.11207545051853,0.730953646538188,0.471807930864739,0,0.937057782901357,0,3.32629852184552,0,2.76209081994573,1.20990716048664,0,0.821425535170343,0.901940516486955,0.518440956986236,1.99396161812156,0.330991955875499,0,0,0,0,2.60339607502696,2.93977192243133,3.74354588295731,0.873633341210151,0,1.9351266257817,3.14284063470598,2.87404099686232,1.84279131327997,0,1.35588444468319,1.09633539717401,0,3.54540457352921,1.95551382734803,2.16428814679141,2.56143593687223,2.39771531498556,1.15272333723285,0,0,1.87271237384595,1.11827282008889,0.942776138467182,0.135904206073614,0.209205692624666,0.407992870545287,0,0.600420288709789,0.684526894459965,0,0,0,2.51354161145029,0.687481272035051,3.58936512288407,1.59743200399193,0.429226048136571,1.56220020209311,0.403100834920358,0,0,0,0,0,0.885847333632739,0,1.59045937961861,1.0896272488926,0.643012593860077,1.2378549293751,2.07720169014593,0,0,1.64023802976667,1.34173875039706,1.02447419488958,0.681909645754975,0.739202355635845,1.97216073266129,1.34340638123612,2.85878130549347,0.662091970365432,0,3.25799761052228,0.864221491201268,0.326587360109409,0,1.31348033198942,0,0,1.31897010310274,2.65013777824443,0.646414781807753,0.26446520348538,2.39521573038061,2.81926008926669,0.961086713109252,1.25763444079733,0.828478110694391,0,0,0,3.83004754662109,0,0,0,0,0.471162288750703,0,1.46431517882356,2.253436752717,1.72022758707021,1.10929051536852,0.807253238237985,0.276697269872462,0.624902039810533,0,0,2.35265819698172,0,0,0,0.233713309847224,0,0.378806010550178,0.754703705257725,0,0,0.151230923763239,0.15543720058278,0,0.318593534327405,0,0.310525913752519,0.414706207840855,0.265841714557995,0,0.450772826991655,2.28483127301277,0.813741466409323,0,0.859284456339908,0.464033759878494,0.796191777397232,0,0,0,0,0.192619830407303,1.71553273099941,0.260994291965212,1.81364740409818,0.463044948647668,0,0.71635536432595,1.23520578864389,0.219284049578707,1.06013487567529,0,0.337884881306145,0.512483037175893,0,0.607719912354764,2.07387654227596,0,0,0,0,1.47463745252232,3.38099397373803,0,0.213383459388282,0,0,0,2.79759015438889,1.24415452006595,0,0,0,0,0,0.850299680406731,0,0,0.318004350653419,0,0,0.352675943690684,0,2.376481328569,1.41696576325585,1.27707087245721,3.07674546361133,0.252071696221718,2.21303207885497,2.42213468447777,1.42769420259154,1.86480665151949,4.01097059382317,1.83428598521679,1.61735932610474,0.762764190934334,2.0710797781803,1.19349733269765,0.451261970095544,1.0085253435176,2.34454203369928,0,0,2.36569737947272,3.64702956939331,2.34323429584154,2.68692835451539,3.17079050969534,0,0.548257766857182,0.496211178389294,0,3.06629826335029,0.535701835878287,0,2.42786241694653,2.73194629621557,0.975726071789027,0.345701962667338,0,3.39848664884159,1.84163765975977,0.827356886187777,2.00216523405724,0.941917114206168,3.45654297815204,3.36326595976547,0.913158720509496,1.94334832096759,0,0.142953088353313,0,0,0,0.801711364730253,1.24329698497822,0.85359238546975,3.45629830907046,0.430227358820278,0.118332000730565,0,2.11693525095465,1.60374807980835,3.72247662797184,4.77769469488717,1.78968690876468,0.490751168076215,2.92603019957447,0,0.307988420568741,0,0,1.16969731731053,0.397901550322736,0,1.6941912305844,0,1.20770274853339,3.6271854310734,0.437119121007915,0,0.245148321753905,0.471353094203252,0.588925401344836,0,0,0.169927114687817,0.0939839179798536,0,0.399764623699716,2.85686301769052,3.88184358887261,0.882655033580851,3.65168194123259,0.458729283404541,0.430018749454354,0,2.37970215668201,0,0.5290268405154,1.85997509083376,1.84870251452567,0.432626562123789,0,0.764859003745869,2.15387451719443,2.54972074354954,2.6721740526556,5.97316846976492,0,0.0757786982182394,0,0,0.724030971033267,1.0661699095049,0.714193294391221,0.0645889098360061,0.248298857183432,1.56984607612859,1.33659032384146,0.808468755832877,1.95945073107265,1.02669990325584,1.34704106029175,2.79716601031438,3.32660356546013,3.41893728166093,0,3.8614456457388,2.42528045687785,2.34640942403454,0.244482888365733,0.406896178315738,1.99727032255654,0,0 | |||
|short_description=p4@KCNK1 | |||
}} |
Revision as of 00:45, 11 January 2014
Short description: | p4@KCNK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_KCNK1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000366621, NM_002245, uc010pxo.1_5end |
EntrezGene: | KCNK1 |
HGNC: | 6272 |
UniProt: | O00180 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.37e-18 | 253 |
endo-epithelial cell | 3.06e-12 | 42 |
endodermal cell | 7.98e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 4.05e-11 | 160 |
endoderm | 4.05e-11 | 160 |
presumptive endoderm | 4.05e-11 | 160 |
organ system subdivision | 4.95e-10 | 223 |
respiratory tract | 6.83e-09 | 54 |
respiratory system | 1.00e-08 | 74 |
respiratory primordium | 1.29e-08 | 38 |
endoderm of foregut | 1.29e-08 | 38 |
digestive system | 2.88e-08 | 145 |
digestive tract | 2.88e-08 | 145 |
primitive gut | 2.88e-08 | 145 |
cerebral hemisphere | 5.64e-08 | 32 |
adult organism | 8.73e-08 | 114 |
larynx | 1.48e-07 | 9 |
regional part of nervous system | 1.66e-07 | 53 |
regional part of brain | 1.66e-07 | 53 |
segment of respiratory tract | 2.08e-07 | 47 |
regional part of cerebral cortex | 2.42e-07 | 22 |
telencephalon | 3.79e-07 | 34 |
regional part of telencephalon | 6.81e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.17e-16 | 106 |
cell type cancer | 1.48e-10 | 143 |
squamous cell carcinoma | 3.72e-08 | 14 |