FFCP PHASE1:Hg19::chr10:6625605..6625634,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-3bp_to_ENST00000414894_5end | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_1_at_ENST00000414894_5end | |||
|id=chr10:6625605..6625634,+ | |||
|ontology_enrichment_celltype=CL:0000791!7.68e-27!18;CL:0000789!7.68e-27!18;CL:0002420!7.68e-27!18;CL:0002419!7.68e-27!18;CL:0000790!7.68e-27!18;CL:0000738!1.89e-25!140;CL:0002087!6.04e-24!119;CL:0000037!4.52e-21!172;CL:0000566!4.52e-21!172;CL:0002031!8.90e-20!124;CL:0000988!8.79e-19!182;CL:0002032!4.05e-18!165;CL:0000837!4.05e-18!165;CL:0000084!1.69e-17!25;CL:0000827!1.69e-17!25;CL:0000625!4.11e-17!11;CL:0000838!3.61e-12!52;CL:0000542!8.64e-12!53;CL:0000051!8.64e-12!53;CL:0000766!4.44e-11!76;CL:0002194!3.75e-10!63;CL:0000576!3.75e-10!63;CL:0000040!3.75e-10!63;CL:0000559!3.75e-10!63;CL:0000624!4.00e-10!6;CL:0002057!6.46e-10!42;CL:0002009!1.33e-09!65;CL:0000839!4.34e-09!70;CL:0000860!7.44e-09!45;CL:0000557!7.49e-09!71;CL:0000763!6.58e-08!112;CL:0000049!6.58e-08!112 | |||
|ontology_enrichment_celltype_v019=CL:0000791;7.08e-48;18!CL:0000789;7.08e-48;18!CL:0002419;7.08e-48;18!CL:0000084;5.39e-33;25!CL:0000625;5.33e-30;11!CL:0000624;3.40e-17;6!CL:0000542;8.80e-12;53!CL:0000898;1.92e-09;3!CL:0000226;8.19e-09;3!CL:0000842;8.19e-09;3!CL:0000623;1.22e-08;3!CL:0002087;6.04e-07;104!CL:0000815;7.90e-07;2!CL:0000792;7.90e-07;2!CL:0002677;7.90e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,7.19e-48,18;CL:0000789,7.19e-48,18;CL:0002420,7.19e-48,18;CL:0002419,7.19e-48,18;CL:0000790,7.19e-48,18;CL:0000084,5.45e-33,25;CL:0000827,5.45e-33,25;CL:0000625,5.42e-30,11;CL:0000838,2.52e-22,52;CL:0000542,8.80e-22,53;CL:0000051,8.80e-22,53;CL:0000624,3.41e-17,6;CL:0000738,8.35e-17,136;CL:0002087,1.65e-16,115;CL:0000037,1.05e-12,168;CL:0002031,4.49e-12,120;CL:0000988,1.37e-11,177;CL:0002032,4.69e-10,161;CL:0000837,4.69e-10,161;CL:0000898,1.89e-09,3;CL:0000226,8.30e-09,3;CL:0000842,8.30e-09,3;CL:0000623,1.21e-08,3;CL:0000825,1.21e-08,3;CL:0000815,7.90e-07,2;CL:0000792,7.90e-07,2;CL:0002677,7.90e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000790;7.08e-48;18!CL:0000051;8.80e-12;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.93e-18!102;UBERON:0003061!3.93e-18!102;UBERON:0002193!2.96e-17!112;UBERON:0000178!5.03e-13!15;UBERON:0000179!5.03e-13!15;UBERON:0000463!5.03e-13!15;UBERON:0007023!3.36e-11!115;UBERON:0002405!9.57e-08!115;UBERON:0002371!5.12e-07!80;UBERON:0004177!6.32e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.41e-23;15!UBERON:0000179;1.41e-23;15!UBERON:0000463;1.41e-23;15!UBERON:0002390;8.06e-11;32!UBERON:0002193;7.86e-08;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.47e-23,15;UBERON:0000179,1.47e-23,15;UBERON:0000463,1.47e-23,15;UBERON:0002193,1.46e-07,108;UBERON:0002390,4.07e-07,98;UBERON:0003061,4.07e-07,98 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57345710739562,0.767658796194425,2.32224184974114,0,0,0,0,0,0,1.66198622559563,4.61252229181326,7.81239134577067,0.447830948479849,1.6194683300949,0.257575567634187,0,0,0.242584061187816,0,0.411167888021826,0.309706370895104,0.28769239232215,0.768482119587302,0,0,0,0,0.188242339542605,0.818718450173537,0,0.306083892370903,0.320929027076094,1.27867425159808,0.329851300186716,0,0.852449501065388,0.290209238628584,2.26954089876456,1.24564449799115,0,0.521482918420201,0.217188844705117,0.605399502633369,0.368277635987565,0.316462387440884,0,0,0,0,0,0,0,0,0,0,1.09227722252426,0,0.426730222566507,0,0,1.32208974556972,0,0,0.587237189370939,0,0,3.92355994087075,0,60.3898994249468,56.2005390731306,27.1393978679352,69.0480225963501,102.013669456314,152.450193446584,120.792571612905,27.8526142212934,24.4522903204115,30.7932113471233,17.331447280961,30.6138254144364,28.4829971156133,23.843496167533,34.543752223231,31.0089301736506,115.811805829569,137.783526466202,135.89618094647,29.5737384440648,42.9206952834152,50.8568619314292,26.8200873540673,68.4915640796808,54.0399266700827,68.4325472002829,58.1219959640203,73.9762612472538,42.4764470277976,78.8468249306576,59.9423437752364,10.2819439044614,7.2208852861547,31.8613688542158,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0.324547393654683,0.174129737299267,0.26591592103773,0.238490624305342,1.14398982156026,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.74264123149513,15.9594915763561,20.9158747613732,17.4546529340458,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.5715549780092,28.0428461064202,12.8073069364133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0,0,0,0,0,12.1787426215721,18.351292971417,25.0644762356632,33.828912115006,17.6885777427064,14.9148861574325,17.2810059916197,34.1043825806536,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.597743964753209,3.03912307084262,0,0,0,0,0,0,0,0.295930216910801,21.5534783112246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0.451191321234361,0.392125068635479,1.51039428278258,0.189753732724185,0,0,0,0,0,0.995261931078505,0.265372693510018,5.49927130440263,0,0,0,0,0,0,0,0,0,0,3.62972148145992,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0.229160424011684,0,0,0.429226048136571,0.223171457441873,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.157611414598396,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.533937062838473,0.471612915298998,1.65695622138878,21.8313049597258,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0.221858103073705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265729680626726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385870790539723,0.218559560503957,0,0,0,0.588925401344836,0,0,0,0.751871343838829,1.35361564744512,0,0,0,0,1.46067277649303,4.12856355064087,0.143339583151451,0,0,0,3.7031878836078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639701945702943,0,0.322944549180031,0.744896571550295,0,0.12729431655633,0.202117188958219,0,0,3.90641907484608,0.358611026963382,0,0,0,0,0,0,0.244482888365733,0,0,3.42165449104745,0 | |||
|short_description=p1@ENST00000414894 | |||
}} |
Revision as of 01:36, 11 January 2014
Short description: | p1@ENST00000414894 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000414894_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | -3bp_to_ENST00000414894_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 7.19e-48 | 18 |
alpha-beta T cell | 7.19e-48 | 18 |
immature T cell | 7.19e-48 | 18 |
mature T cell | 7.19e-48 | 18 |
immature alpha-beta T cell | 7.19e-48 | 18 |
T cell | 5.45e-33 | 25 |
pro-T cell | 5.45e-33 | 25 |
CD8-positive, alpha-beta T cell | 5.42e-30 | 11 |
lymphoid lineage restricted progenitor cell | 2.52e-22 | 52 |
lymphocyte | 8.80e-22 | 53 |
common lymphoid progenitor | 8.80e-22 | 53 |
CD4-positive, alpha-beta T cell | 3.41e-17 | 6 |
leukocyte | 8.35e-17 | 136 |
nongranular leukocyte | 1.65e-16 | 115 |
hematopoietic stem cell | 1.05e-12 | 168 |
hematopoietic lineage restricted progenitor cell | 4.49e-12 | 120 |
hematopoietic cell | 1.37e-11 | 177 |
hematopoietic oligopotent progenitor cell | 4.69e-10 | 161 |
hematopoietic multipotent progenitor cell | 4.69e-10 | 161 |
naive T cell | 1.89e-09 | 3 |
single nucleate cell | 8.30e-09 | 3 |
mononuclear cell | 8.30e-09 | 3 |
natural killer cell | 1.21e-08 | 3 |
pro-NK cell | 1.21e-08 | 3 |
regulatory T cell | 7.90e-07 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 7.90e-07 | 2 |
naive regulatory T cell | 7.90e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 1.47e-23 | 15 |
haemolymphatic fluid | 1.47e-23 | 15 |
organism substance | 1.47e-23 | 15 |
hemolymphoid system | 1.46e-07 | 108 |
hematopoietic system | 4.07e-07 | 98 |
blood island | 4.07e-07 | 98 |