FFCP PHASE1:Hg19::chr10:63701218..63701240,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr10:63701218..63701240,+ | |||
|id=chr10:63701218..63701240,+ | |||
|ontology_enrichment_celltype=CL:0002057!5.27e-90!42;CL:0000860!2.70e-83!45;CL:0000766!2.36e-58!76;CL:0002194!2.00e-55!63;CL:0000576!2.00e-55!63;CL:0000040!2.00e-55!63;CL:0000559!2.00e-55!63;CL:0002009!2.00e-53!65;CL:0000839!6.36e-49!70;CL:0000557!4.25e-48!71;CL:0000738!1.26e-40!140;CL:0002087!3.09e-39!119;CL:0000763!4.74e-38!112;CL:0000049!4.74e-38!112;CL:0002031!1.86e-33!124;CL:0000037!3.11e-32!172;CL:0000566!3.11e-32!172;CL:0002032!5.87e-31!165;CL:0000837!5.87e-31!165;CL:0000988!9.25e-30!182;CL:0002393!8.96e-20!9;CL:0002397!8.96e-20!9;CL:0000134!1.30e-09!358;CL:0002320!3.40e-09!365;CL:0000767!6.66e-09!3;CL:0000219!6.89e-09!390;CL:0000875!9.04e-09!3;CL:0002396!9.04e-09!3;CL:0000094!1.33e-08!8;CL:0000048!5.41e-07!430;CL:0000034!6.44e-07!444;CL:0000723!9.92e-07!436 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.51e-95;33!CL:0002057;3.51e-95;33!CL:0000473;1.84e-66;39!CL:0000234;1.84e-66;39!CL:0000576;1.18e-56;48!CL:0000766;5.65e-34;69!CL:0002393;3.45e-21;6!CL:0002397;3.45e-21;6!CL:0002087;1.50e-17;104!CL:0000763;1.60e-14;100!CL:0000738;9.11e-09;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.81e-115,42;CL:0002057,5.81e-115,42;CL:0000473,3.56e-100,48;CL:0000234,3.56e-100,48;CL:0002194,1.83e-79,59;CL:0000576,1.83e-79,59;CL:0000040,1.83e-79,59;CL:0000559,1.83e-79,59;CL:0002009,8.64e-77,61;CL:0000839,8.37e-71,66;CL:0000557,1.03e-69,67;CL:0000766,1.06e-64,72;CL:0000763,3.59e-42,108;CL:0000049,3.59e-42,108;CL:0002087,2.07e-39,115;CL:0002031,1.24e-37,120;CL:0000738,8.11e-33,136;CL:0002032,3.44e-27,161;CL:0000837,3.44e-27,161;CL:0000037,6.55e-26,168;CL:0000988,2.06e-24,177;CL:0002393,3.10e-14,9;CL:0002397,3.10e-14,9;CL:0000134,2.56e-10,354;CL:0002320,4.84e-10,361;CL:0000219,4.58e-09,386;CL:0000048,7.22e-08,427;CL:0000723,1.06e-07,433;CL:0000034,1.73e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;1.62e-79;42!CL:0000049;1.10e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.37e-41!80;UBERON:0001474!5.27e-38!86;UBERON:0002390!2.83e-36!102;UBERON:0003061!2.83e-36!102;UBERON:0002193!5.18e-34!112;UBERON:0004765!6.78e-31!101;UBERON:0001434!6.78e-31!101;UBERON:0002405!3.00e-29!115;UBERON:0002204!6.52e-17!167;UBERON:0003081!1.10e-11!216;UBERON:0002384!1.26e-08!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.69e-61,76;UBERON:0001474,1.74e-56,82;UBERON:0004765,3.26e-51,90;UBERON:0002405,1.82e-49,93;UBERON:0002390,8.64e-47,98;UBERON:0003061,8.64e-47,98;UBERON:0001434,8.57e-46,100;UBERON:0002193,3.59e-42,108;UBERON:0002204,4.36e-26,167;UBERON:0003081,7.95e-21,203;UBERON:0000926,4.41e-12,315;UBERON:0004120,4.41e-12,315;UBERON:0006603,4.41e-12,315;UBERON:0002384,1.15e-09,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0,0,0,0,0.393364276848904,0.383829398097213,0.309632246632152,0,0,0,0,0,0,7.75593571944628,1.00272223735071,1.95309783644267,0,0,0,0.145398238779565,0,0.242584061187816,1.85943229524548,0.411167888021826,1.23882548358041,4.60307827715441,2.0492856522328,9.69577142543199,3.44745680736619,4.51839278508678,2.70852973188684,0,0,1.12361742222542,8.57034898638527,7.70229664982625,3.83602275479425,0,0.797854630486527,1.27867425159808,4.93355705668593,2.8369261234557,3.73693349397345,3.01498398308092,0.521482918420201,4.12658804939722,4.84319602106695,8.83866326370155,17.4054313092486,0,1.70083439972035,0.838634582033504,0.898629049171961,0.150176892841506,0.48217676009124,0.285012743741249,0.39783335439818,0.182664153764634,0,0,0,0.426730222566507,0.400395987036012,0.574752439954483,0.661044872784862,0.954053754535364,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.749007023947182,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422250816255987,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.913158720509496,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr10:63701218..63701240,+ | |||
}} |
Revision as of 03:01, 11 January 2014
Short description: | p@chr10:63701218..63701240, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:63701218..63701240, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.81e-115 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.81e-115 | 42 |
defensive cell | 3.56e-100 | 48 |
phagocyte | 3.56e-100 | 48 |
monopoietic cell | 1.83e-79 | 59 |
monocyte | 1.83e-79 | 59 |
monoblast | 1.83e-79 | 59 |
promonocyte | 1.83e-79 | 59 |
macrophage dendritic cell progenitor | 8.64e-77 | 61 |
myeloid lineage restricted progenitor cell | 8.37e-71 | 66 |
granulocyte monocyte progenitor cell | 1.03e-69 | 67 |
myeloid leukocyte | 1.06e-64 | 72 |
myeloid cell | 3.59e-42 | 108 |
common myeloid progenitor | 3.59e-42 | 108 |
nongranular leukocyte | 2.07e-39 | 115 |
hematopoietic lineage restricted progenitor cell | 1.24e-37 | 120 |
leukocyte | 8.11e-33 | 136 |
hematopoietic oligopotent progenitor cell | 3.44e-27 | 161 |
hematopoietic multipotent progenitor cell | 3.44e-27 | 161 |
hematopoietic stem cell | 6.55e-26 | 168 |
hematopoietic cell | 2.06e-24 | 177 |
intermediate monocyte | 3.10e-14 | 9 |
CD14-positive, CD16-positive monocyte | 3.10e-14 | 9 |
mesenchymal cell | 2.56e-10 | 354 |
connective tissue cell | 4.84e-10 | 361 |
motile cell | 4.58e-09 | 386 |
multi fate stem cell | 7.22e-08 | 427 |
somatic stem cell | 1.06e-07 | 433 |
stem cell | 1.73e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.69e-61 | 76 |
bone element | 1.74e-56 | 82 |
skeletal element | 3.26e-51 | 90 |
immune system | 1.82e-49 | 93 |
hematopoietic system | 8.64e-47 | 98 |
blood island | 8.64e-47 | 98 |
skeletal system | 8.57e-46 | 100 |
hemolymphoid system | 3.59e-42 | 108 |
musculoskeletal system | 4.36e-26 | 167 |
lateral plate mesoderm | 7.95e-21 | 203 |
mesoderm | 4.41e-12 | 315 |
mesoderm-derived structure | 4.41e-12 | 315 |
presumptive mesoderm | 4.41e-12 | 315 |
connective tissue | 1.15e-09 | 371 |