FFCP PHASE1:Hg19::chr10:74068396..74068437,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr10:74068396..74068437,- | |||
|id=chr10:74068396..74068437,- | |||
|ontology_enrichment_celltype=CL:0002057!9.05e-46!42;CL:0000860!6.07e-42!45;CL:0000766!1.23e-36!76;CL:0000839!1.37e-34!70;CL:0000557!6.34e-34!71;CL:0002194!1.62e-31!63;CL:0000576!1.62e-31!63;CL:0000040!1.62e-31!63;CL:0000559!1.62e-31!63;CL:0002009!3.40e-30!65;CL:0000763!1.04e-21!112;CL:0000049!1.04e-21!112;CL:0000738!1.14e-17!140;CL:0002031!3.58e-16!124;CL:0002087!3.17e-15!119;CL:0000037!1.23e-12!172;CL:0000566!1.23e-12!172;CL:0002032!3.52e-12!165;CL:0000837!3.52e-12!165;CL:0000988!3.13e-11!182;CL:0000134!8.61e-11!358;CL:0000048!1.48e-10!430;CL:0002320!3.20e-10!365;CL:0000723!4.05e-10!436;CL:0000034!4.21e-10!444;CL:0000219!3.03e-08!390;CL:0002371!3.51e-08!591;CL:0000569!1.42e-07!4;CL:0000011!1.42e-07!4;CL:0000144!2.40e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.76e-99;33!CL:0002057;1.76e-99;33!CL:0000473;1.82e-68;39!CL:0000234;1.82e-68;39!CL:0000576;6.70e-58;48!CL:0000766;5.14e-36;69!CL:0000763;8.52e-16;100!CL:0002087;2.72e-14;104!CL:0002393;2.79e-09;6!CL:0002397;2.79e-09;6!CL:0000738;6.83e-09;136!CL:0000767;1.82e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.31e-106,42;CL:0002057,2.31e-106,42;CL:0000473,2.04e-92,48;CL:0000234,2.04e-92,48;CL:0002194,6.91e-73,59;CL:0000576,6.91e-73,59;CL:0000040,6.91e-73,59;CL:0000559,6.91e-73,59;CL:0002009,2.29e-70,61;CL:0000766,5.65e-68,72;CL:0000839,1.01e-64,66;CL:0000557,1.08e-63,67;CL:0000763,1.02e-43,108;CL:0000049,1.02e-43,108;CL:0002087,4.03e-35,115;CL:0000738,1.20e-33,136;CL:0002031,1.91e-33,120;CL:0002032,1.37e-27,161;CL:0000837,1.37e-27,161;CL:0000037,3.25e-26,168;CL:0000988,1.33e-24,177;CL:0000134,2.25e-11,354;CL:0002320,4.87e-11,361;CL:0000219,7.48e-10,386;CL:0000767,2.04e-08,3;CL:0000048,2.13e-08,427;CL:0000723,3.38e-08,433;CL:0000034,6.14e-08,441 | |||
|ontology_enrichment_development_v019=CL:0002057;6.34e-78;42!CL:0000049;1.62e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.09e-28!80;UBERON:0001474!2.95e-27!86;UBERON:0004765!9.80e-24!101;UBERON:0001434!9.80e-24!101;UBERON:0002390!2.65e-22!102;UBERON:0003061!2.65e-22!102;UBERON:0002193!3.51e-19!112;UBERON:0002405!3.61e-18!115;UBERON:0002204!3.07e-17!167;UBERON:0003081!1.42e-14!216;UBERON:0002384!1.87e-10!375;UBERON:0000926!9.63e-09!448;UBERON:0004120!9.63e-09!448;UBERON:0006603!9.63e-09!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.26e-55,76;UBERON:0001474,3.20e-51,82;UBERON:0004765,3.01e-46,90;UBERON:0002405,1.33e-44,93;UBERON:0002390,4.46e-42,98;UBERON:0003061,4.46e-42,98;UBERON:0001434,3.88e-41,100;UBERON:0002193,1.01e-37,108;UBERON:0002204,1.46e-22,167;UBERON:0003081,1.87e-22,203;UBERON:0000926,1.52e-13,315;UBERON:0004120,1.52e-13,315;UBERON:0006603,1.52e-13,315;UBERON:0002384,1.40e-10,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18009283054671,0.383829398097213,1.39334510984468,0,0,0.369754010166788,0,0,0,1.66198622559563,2.60707781711184,3.25516306073778,0,0,0,0.872389432677388,0.377875943688809,1.21292030593908,3.48643555358527,3.28934310417461,2.47765096716083,8.34307937734236,4.35473201099471,8.0403958162119,21.0294865249337,3.22742341791913,9.47985406160392,2.63539275359647,1.36453075028923,2.02251136000576,26.6292986362685,18.9348125974895,12.1474053901818,0,0.598390972864896,0,30.4719700560013,22.1280237629545,15.5705562248894,3.26623264833766,2.08593167368081,2.6062661364614,7.87019353423379,19.5187147073409,13.9243450473989,0.422510572623884,0.637812899895131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89853131913626,0,0,0,0.436094052142534,0,0,0.397227542439656,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0.201504196455281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0.234004265139238,0.148631162288728,0,0,0.141775097242386,0,0,0,0,0.088048434013226,0.829312462163088,0.864719720501769,0.6312121671319,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.320182673410333,0,1.66435439510497,0,0,0.306923946576125,0,0.128139149255701,0,0,0,0,0.177561725313127,0.0821271560138091,0,0,0,0,0.184161977871793,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0.165018999841176,0,0,0,0,0,0,0.137836572484531,0,0,0.0852266274161009,0,0,0,0,0.10115778085555,0,0.31481234683064,0,0,0.532306030317022,0,0.18532421910392,0.143124886741991,0,0,0.38126038784765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0.563391205064483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0.447352215784832,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0.593929361665277,0,0,0,0,0.659215496907038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.60129367765797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0.285465333544967,0,0,0,0.149254802886874,0.701139929541673,0,0,0,0,0.686520205190771,0.151230923763239,1.24349760466224,0.295710299979268,0.318593534327405,0,0,0.414706207840855,0,0,0.150257608997218,0,0.406870733204662,1.27294061441792,0.751873899297419,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0.47775168788705,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0.196300467230486,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727345877715,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p@chr10:74068396..74068437,- | |||
}} |
Revision as of 03:27, 11 January 2014
Short description: | p@chr10:74068396..74068437, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:74068396..74068437, - |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.31e-106 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.31e-106 | 42 |
defensive cell | 2.04e-92 | 48 |
phagocyte | 2.04e-92 | 48 |
monopoietic cell | 6.91e-73 | 59 |
monocyte | 6.91e-73 | 59 |
monoblast | 6.91e-73 | 59 |
promonocyte | 6.91e-73 | 59 |
macrophage dendritic cell progenitor | 2.29e-70 | 61 |
myeloid leukocyte | 5.65e-68 | 72 |
myeloid lineage restricted progenitor cell | 1.01e-64 | 66 |
granulocyte monocyte progenitor cell | 1.08e-63 | 67 |
myeloid cell | 1.02e-43 | 108 |
common myeloid progenitor | 1.02e-43 | 108 |
nongranular leukocyte | 4.03e-35 | 115 |
leukocyte | 1.20e-33 | 136 |
hematopoietic lineage restricted progenitor cell | 1.91e-33 | 120 |
hematopoietic oligopotent progenitor cell | 1.37e-27 | 161 |
hematopoietic multipotent progenitor cell | 1.37e-27 | 161 |
hematopoietic stem cell | 3.25e-26 | 168 |
hematopoietic cell | 1.33e-24 | 177 |
mesenchymal cell | 2.25e-11 | 354 |
connective tissue cell | 4.87e-11 | 361 |
motile cell | 7.48e-10 | 386 |
basophil | 2.04e-08 | 3 |
multi fate stem cell | 2.13e-08 | 427 |
somatic stem cell | 3.38e-08 | 433 |
stem cell | 6.14e-08 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.26e-55 | 76 |
bone element | 3.20e-51 | 82 |
skeletal element | 3.01e-46 | 90 |
immune system | 1.33e-44 | 93 |
hematopoietic system | 4.46e-42 | 98 |
blood island | 4.46e-42 | 98 |
skeletal system | 3.88e-41 | 100 |
hemolymphoid system | 1.01e-37 | 108 |
musculoskeletal system | 1.46e-22 | 167 |
lateral plate mesoderm | 1.87e-22 | 203 |
mesoderm | 1.52e-13 | 315 |
mesoderm-derived structure | 1.52e-13 | 315 |
presumptive mesoderm | 1.52e-13 | 315 |
connective tissue | 1.40e-10 | 371 |