FFCP PHASE1:Hg19::chr10:105881020..105881051,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=119392 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=29574 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=143bp_to_AK123954_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_4_at_SFR1_5end | |||
|id=chr10:105881020..105881051,+ | |||
|ontology_enrichment_celltype=CL:0000860!1.10e-42!45;CL:0002057!2.09e-41!42;CL:0000766!1.68e-34!76;CL:0002009!1.04e-31!65;CL:0002194!2.50e-30!63;CL:0000576!2.50e-30!63;CL:0000040!2.50e-30!63;CL:0000559!2.50e-30!63;CL:0000557!1.15e-29!71;CL:0000839!1.28e-27!70;CL:0000738!8.14e-21!140;CL:0000763!1.10e-18!112;CL:0000049!1.10e-18!112;CL:0002087!7.55e-18!119;CL:0002031!1.95e-17!124;CL:0002032!5.92e-13!165;CL:0000837!5.92e-13!165;CL:0000037!7.28e-13!172;CL:0000566!7.28e-13!172;CL:0000988!6.62e-11!182;CL:0000048!5.50e-10!430;CL:0000134!7.12e-10!358;CL:0002320!9.29e-10!365;CL:0000034!2.22e-09!444;CL:0000723!2.51e-09!436;CL:0002393!1.82e-08!9;CL:0002397!1.82e-08!9;CL:0000219!3.01e-07!390;CL:0000094!7.75e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.29e-93;33!CL:0002057;1.29e-93;33!CL:0000473;4.75e-65;39!CL:0000234;4.75e-65;39!CL:0000576;5.26e-51;48!CL:0000766;5.16e-33;69!CL:0000763;1.28e-16;100!CL:0000094;6.66e-16;8!CL:0002087;6.94e-16;104!CL:0000767;6.99e-12;3!CL:0000081;2.18e-11;11!CL:0000738;2.85e-11;136!CL:0000623;1.01e-10;3!CL:0000771;4.27e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.62e-96,42;CL:0002057,1.62e-96,42;CL:0000473,2.29e-83,48;CL:0000234,2.29e-83,48;CL:0000766,1.35e-73,72;CL:0002009,1.88e-66,61;CL:0002194,5.88e-65,59;CL:0000576,5.88e-65,59;CL:0000040,5.88e-65,59;CL:0000559,5.88e-65,59;CL:0000557,8.32e-60,67;CL:0000839,2.90e-57,66;CL:0000763,1.17e-48,108;CL:0000049,1.17e-48,108;CL:0000738,1.50e-47,136;CL:0002087,6.47e-40,115;CL:0000037,1.42e-36,168;CL:0002031,1.15e-35,120;CL:0002032,9.67e-35,161;CL:0000837,9.67e-35,161;CL:0000988,3.39e-34,177;CL:0000094,6.24e-16,8;CL:0000134,2.13e-15,354;CL:0002320,6.87e-15,361;CL:0000219,4.28e-13,386;CL:0000767,7.26e-12,3;CL:0000034,9.64e-12,441;CL:0000081,2.08e-11,11;CL:0000048,6.68e-11,427;CL:0000723,1.34e-10,433;CL:0000623,1.41e-10,3;CL:0000825,1.41e-10,3;CL:0000771,4.04e-08,2 | |||
|ontology_enrichment_development_v019=CL:0002057;5.89e-71;42!CL:0000049;2.12e-13;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.58e-27!80;UBERON:0001474!6.88e-24!86;UBERON:0004765!9.23e-24!101;UBERON:0001434!9.23e-24!101;UBERON:0002390!5.76e-19!102;UBERON:0003061!5.76e-19!102;UBERON:0002405!9.84e-18!115;UBERON:0002193!5.68e-17!112;UBERON:0002204!7.19e-17!167;UBERON:0003081!1.57e-12!216;UBERON:0002384!2.10e-09!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.82e-52,76;UBERON:0001474,2.13e-47,82;UBERON:0002390,2.53e-43,98;UBERON:0003061,2.53e-43,98;UBERON:0004765,1.87e-42,90;UBERON:0002405,8.11e-41,93;UBERON:0002193,1.66e-38,108;UBERON:0001434,2.24e-37,100;UBERON:0002204,5.43e-19,167;UBERON:0003081,1.15e-18,203;UBERON:0002384,3.40e-14,371;UBERON:0000926,1.62e-09,315;UBERON:0004120,1.62e-09,315;UBERON:0006603,1.62e-09,315 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,11.8009283054671,7.29275856384704,7.1215416725395,0,0.30120591877825,0,0,0,0,15.5118714388926,9.42558903109666,13.8886957258145,0,0,0.257575567634187,2.18097358169347,2.26725566213286,4.36651310138069,10.9241647345672,8.63452564845834,11.7688420940139,8.91846416198666,11.0149103807513,19.1550606209754,45.161684176497,41.3110197493649,55.5248595036801,7.52969358170419,7.36846605156184,13.7081325511502,30.9144731294612,46.2137798989575,45.3929359317319,1.9791078011203,1.39624560335142,4.68847225585964,67.0383341232029,56.1711372444228,67.2648028915221,3.26623264833766,5.73631210262222,8.68755378820467,37.5347691632689,76.6017482854134,93.9893290699427,0.845021145247767,0.425208599930087,0.628975936525128,0.44931452458598,0.901061357049038,1.44653028027372,0.570025487482497,0.39783335439818,0.182664153764634,0,0,0,0,0,0,0,0,0,0.587237189370939,0,1.32171328579026,3.92355994087075,0,0.196709770113833,0.393010762749165,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0.236777252044017,0,0.403213486449465,0.267440195783507,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0.130979075497713,0,0,0,0,0.132957960518865,0.476981248610684,0,0,0.198762407366705,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,3.87780264148325,0,0.496971951695318,0.12663051166458,0.794455084879313,0.573673241497627,0,0,1.06748995729705,0,0.311211035399766,0.134710672069688,0.163461903113459,0,0,0,0,0,0.298897361103602,0,0,0,0,0.122834317311768,0,0,0.247266929278557,0,0,0,0,0,0.438977620880838,0,0.150238058906597,0.113432183160021,0,0,0,0,0,0,0.18611685633159,0,0,0.252433774244115,0,0,0,0,0,0.193260853163297,0.545492241181669,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0.217879444092406,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0.144366447761074,0,0.761016608938393,0,0,0,0.234004265139238,0,0,0.335964256397719,0.567100388969546,0.179117045405697,0,0.383382679165211,0,0,0.207328115540772,0,0.25248486685276,0.063497894292169,0,0,0,0,0,0,0,0,0,0.517086863031111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.410952645100767,0,0,1.37921532141349,1.2937654491571,1.15508732651774,0,0,0,0,0,0,2.99161459204025,0.828831026872071,0.12269149171914,0,0,0,0.178428988797162,0.157702415033935,0,0,0,0,0,0,0,0,0,0,2.37285620900479,3.41528184971022,0.303127571446259,0,0,0,0,0,0.128139149255701,0,0.482561763430822,0,0,0,0.0821271560138091,0,0,0,0.40101294060657,0.0920809889358963,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.096670718292122,0,0.15350367472613,0,0,0,0.170453254832202,0,0.495854746082934,0.576570202095319,0.893288987462089,0,0,0,0.6970372701606,0.616067160352178,0.532306030317022,0.869932992075073,0.37064843820784,0.143124886741991,0,0,0,0,0,0.636406495851874,0.78494864019923,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0.551365343546124,0,0.438450885253763,0,0,0.608731130888112,0,0,0,0,0,0,0.422215270595328,0.329294892959902,0,0,0.192444225451024,0,0,0.0941438007767792,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0.296964680832639,0,0.994147647766298,0.140669416410513,0.222617410045812,0,0.211125408127993,0.19924798825107,0,0,0,0.123084805461069,0,0.269605053441981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0.0769502585037971,0.455768223388005,0,0.0897576444097721,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0.330991955875499,0,0,0,0,0,0.195984794828755,0,0,0.171986032471617,0.290268993867255,0.292357268344742,0.164230914106418,0,0,0,0,0.19871461170299,0,0,0.0801588202515337,0,0,0,0.114536596165916,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0.279282401272254,0,1.43574604915363,0.199679000498991,0,0.223171457441873,0.0671834724867263,0,0,0.0787831823072236,0.164831716762333,0,0.0984274815147488,0,0,0.272406812223151,0,0,0.415440338029185,0.2249738915515,1.5476039091159,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19730191562487,0,0,0,0,1.32506888912221,0,0.39669780522807,0,0,0.320362237703084,0,0,0,0,0,0,0.544017803369474,1.5041393641362,0,1.31149052283922,0,0.886068179966986,0.122026264901963,0,0,0.332787154610557,0.124192805882767,0,0,0,0,0,0,0,0,0,0.554805861502613,0.189403005275089,0,0.889811221596536,0.915360273587694,0,0.15543720058278,0.443565449968902,0.318593534327405,0.449803112163605,0.310525913752519,1.24411862352257,0,0,0.150257608997218,0.380805212168795,0.406870733204662,0.545545977607678,0.107410557042488,0.464033759878494,0,0,0,0.336749488765919,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0.38582807654183,0.337884881306145,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0.172214979660816,0,0.368211900503681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| |||
|short_description=p4@SFR1 | |||
}} |
Revision as of 04:51, 11 January 2014
Short description: | p4@SFR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SFR1_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 143bp_to_AK123954_5end |
EntrezGene: | SFR1 |
HGNC: | 29574 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.82e-52 | 76 |
bone element | 2.13e-47 | 82 |
hematopoietic system | 2.53e-43 | 98 |
blood island | 2.53e-43 | 98 |
skeletal element | 1.87e-42 | 90 |
immune system | 8.11e-41 | 93 |
hemolymphoid system | 1.66e-38 | 108 |
skeletal system | 2.24e-37 | 100 |
musculoskeletal system | 5.43e-19 | 167 |
lateral plate mesoderm | 1.15e-18 | 203 |
connective tissue | 3.40e-14 | 371 |
mesoderm | 1.62e-09 | 315 |
mesoderm-derived structure | 1.62e-09 | 315 |
presumptive mesoderm | 1.62e-09 | 315 |