FFCP PHASE1:Hg19::chr11:2950407..2950420,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=270bp_to_CU674966_5end | |||
|coexpression_cluster_id=C325 | |||
|description=CAGE_peak_1_at_CU674966_5end | |||
|id=chr11:2950407..2950420,+ | |||
|ontology_enrichment_celltype=CL:0002057!9.96e-30!42;CL:0000860!1.82e-28!45;CL:0000766!5.88e-22!76;CL:0000557!2.37e-18!71;CL:0002009!1.60e-17!65;CL:0000839!1.31e-16!70;CL:0002194!2.47e-16!63;CL:0000576!2.47e-16!63;CL:0000040!2.47e-16!63;CL:0000559!2.47e-16!63;CL:0000738!8.16e-15!140;CL:0002031!7.09e-11!124;CL:0002087!1.95e-10!119;CL:0000763!2.77e-10!112;CL:0000049!2.77e-10!112;CL:0000048!8.64e-10!430;CL:0000034!1.05e-09!444;CL:0000723!1.90e-09!436;CL:0002371!3.14e-09!591;CL:0000988!3.50e-09!182;CL:0002320!2.07e-08!365;CL:0000037!3.58e-08!172;CL:0000566!3.58e-08!172;CL:0000144!4.53e-08!625;CL:0000134!5.47e-08!358;CL:0000219!5.90e-08!390;CL:0000003!7.51e-08!722;CL:0000012!1.29e-07!682;CL:0002032!3.50e-07!165;CL:0000837!3.50e-07!165;CL:0000548!8.50e-07!679;CL:0000004!8.50e-07!679;CL:0000255!8.50e-07!679 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.56e-50;33!CL:0002057;3.56e-50;33!CL:0000473;1.49e-35;39!CL:0000234;1.49e-35;39!CL:0000576;5.56e-31;48!CL:0000766;9.27e-28;69!CL:0000094;2.05e-15;8!CL:0000763;4.69e-12;100!CL:0002087;3.13e-11;104!CL:0000081;7.72e-11;11!CL:0002393;2.17e-10;6!CL:0002397;2.17e-10;6!CL:0000738;5.64e-10;136!CL:0000767;1.50e-08;3!CL:0000226;2.19e-07;3!CL:0000842;2.19e-07;3!CL:0000623;3.06e-07;3!CL:0000219;9.68e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.63e-57,42;CL:0002057,1.63e-57,42;CL:0000766,2.51e-56,72;CL:0000473,5.64e-52,48;CL:0000234,5.64e-52,48;CL:0000738,4.49e-46,136;CL:0000557,4.80e-46,67;CL:0002009,8.91e-43,61;CL:0000839,7.22e-42,66;CL:0002194,2.02e-39,59;CL:0000576,2.02e-39,59;CL:0000040,2.02e-39,59;CL:0000559,2.02e-39,59;CL:0000763,7.37e-37,108;CL:0000049,7.37e-37,108;CL:0000037,3.01e-34,168;CL:0002031,6.08e-34,120;CL:0002087,4.39e-32,115;CL:0002032,6.92e-32,161;CL:0000837,6.92e-32,161;CL:0000988,1.07e-31,177;CL:0000134,1.28e-22,354;CL:0002320,8.27e-22,361;CL:0000219,5.82e-19,386;CL:0000034,3.13e-18,441;CL:0000048,8.49e-18,427;CL:0000723,2.79e-17,433;CL:0000094,2.06e-15,8;CL:0000081,7.76e-11,11;CL:0000767,1.69e-08,3;CL:0000226,1.51e-07,3;CL:0000842,1.51e-07,3;CL:0000623,2.64e-07,3;CL:0000825,2.64e-07,3;CL:0002393,6.48e-07,9;CL:0002397,6.48e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;2.46e-41;42!CL:0000049;1.02e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.27e-18!80;UBERON:0001474!4.42e-16!86;UBERON:0002390!4.85e-14!102;UBERON:0003061!4.85e-14!102;UBERON:0004765!6.05e-14!101;UBERON:0001434!6.05e-14!101;UBERON:0002204!1.45e-13!167;UBERON:0002193!1.38e-11!112;UBERON:0003081!3.31e-11!216;UBERON:0002405!5.61e-10!115;UBERON:0002384!2.14e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.03e-39,76;UBERON:0001474,1.95e-37,82;UBERON:0002390,3.95e-33,98;UBERON:0003061,3.95e-33,98;UBERON:0004765,4.50e-33,90;UBERON:0002405,5.50e-30,93;UBERON:0002193,6.17e-29,108;UBERON:0001434,1.33e-28,100;UBERON:0002384,1.05e-20,371;UBERON:0003081,1.48e-15,203;UBERON:0002204,2.53e-15,167;UBERON:0000926,2.87e-09,315;UBERON:0004120,2.87e-09,315;UBERON:0006603,2.87e-09,315 | |||
|phase1_expression=0,0,0,1.0007329835313,0,0,0,0,0,0.491467873003018,1.39560233594486,0,0,0.123766352960047,0.331397375727916,0.672325146451775,0.602694528023977,0.730310090387373,0.975865597581014,0.246242116153576,0.204000691244253,0.313454721478088,0,0.136874425072884,0.125542639594803,0,0,0,5.50709987588466,3.0706351847777,4.95411594611443,0,0.30120591877825,0,0,0,0.293600439334847,9.41792194504192,6.61796676651468,9.54847831149748,0,0,0,1.45398238779565,1.51150377475524,1.21292030593908,2.09186133215116,3.70051099219643,3.40677007984614,0.863077176966451,2.0492856522328,2.36482229888585,3.7922024881028,1.29096936716765,4.06279459783025,2.44715041405386,2.18324920046277,0.898893937780338,3.36692281607993,3.53021929783703,3.19668562899521,0.659702600373432,1.59570926097305,2.13112375266347,2.32167390902867,3.97169657283798,4.35975574296902,1.7587406567972,4.17186334736161,3.9093992046921,1.21079900526674,3.31449872388808,2.21523671208619,0.422510572623884,1.91343869968539,2.72556239160889,2.02191536063691,1.05123824989054,0.803627933485401,0.855038231223746,0.59675003159727,0.182664153764634,0,0,0,0,0,0,0,0,0.569212969109448,0.587237189370939,0,1.32171328579026,2.24203425192614,0.263384084775077,1.180258620683,1.17903228824749,0.616804496998528,0.167186495390678,1.30368906653436,1.4203434172042,1.94826728407911,0.445641827540694,0.294605907474837,1.10766947291811,0.270803863765016,0.512365278902701,0.260118695119756,0,0.552700035571697,0,0.296573126324121,0,0,0,0,0,0.759059076058509,0,0.651083453856419,0,0.150575119077773,0,0,0,0,1.61285394579786,2.67440195783507,2.02754165435919,0,0,0.12786256184353,0,1.00267582127178,0.434539556882471,0,2.43317435151318,0.378139268656271,0,0.790513071238134,0.0654895377488563,0.364295288292542,0,0,0,0,0.238490624305342,0,0.74291500265913,0,0,0,0.56530794192401,0,0,0.208994966536811,0.258416759169329,0,0,0.402829317109147,0,0,0,0.81014194788176,0.0892997282840798,0.22452937262617,0,0,0,0.183201743930407,14.495845917967,19.3890132074163,0,0.496971951695318,0.25326102332916,0.662045904066094,2.0078563452417,0.354668382198357,0,0,0.24666754841716,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0.448346041655403,0,0,0,0.408308342509787,0,0,0,0,0,0,0,0.125118519871964,0.277064115484183,0,0,0.150238058906597,0.113432183160021,1.07633781413317,0.213557388818567,0.211931901159562,0.900273288253207,0.618315175430633,1.03056216018252,0,0.337552664482532,0,1.26216887122057,0.368199594569197,0,1.77504796258307,0.10075209822764,0,0,0,0.286804595389004,0,0,0.116193942869518,0,0,0,1.56449532329816,0,1.38134921352481,1.39310378409594,0,0.118306800039844,0,0.241011029883482,0.110293972732394,0.217879444092406,0.71181185733329,0,0,0.38474715694639,0,1.40241773803446,0.4115740113314,0,0,0,0,0,0,0,0,0,0.201057944823262,0.185176890317059,0,0,0,0,0.469634776943287,0,0,0,0,0,0,0,0,0,0,0.425325291727159,0.0895585227028483,0,0,0,0.088048434013226,12.0250307013648,12.1060760870248,8.45824303956746,0.126995788584338,0,0,0,0.308482478109971,0,0.285826432630578,0.112131084345361,0,0.07333828582095,0.387815147273333,0,0.845302752556,0,0,0.514414748524284,0,0,0,0,0,0,0,0.791951872933429,0,0,0.199945982364114,1.2162378064119,0,0,0.239624855491583,0,0,0.144781306667579,0,0,0,1.18218456121156,1.50939302401662,2.43851768931522,0.254094624222463,0,0,0,0,3.74503511973591,0,3.72973962092432,0.24538298343828,0,0,0,0.178428988797162,0.157702415033935,0.117141414992713,0.300946099727719,0,0,1.32845119707087,0.737476674166813,0.173767228936166,0.391602314925481,0.343143423810856,1.86091223510599,1.2942852049117,3.30855429190677,0.303127571446259,0,0,0,0.306923946576125,0,0.128139149255701,0,0,0,0.154209693802656,0.887808626565635,0,0.519254429183621,0.348631135379878,0,0.200506470303285,0.184161977871793,0,1.27463817604702,0.262248829918848,0,0,0,0,0.211103257785751,0,0,0,0,0.270946437543853,0.501689773854853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386682873168488,0,0,0,0.214840489736547,0.435050081742686,0.255679882248303,0.267096106940212,0,0,0.382838137483752,0.4046311234222,0,0.62962469366128,0,0.308033580176089,0,0.869932992075073,0.18532421910392,0,0,0.316379424718726,0,0.255897791311334,0.42793898803392,0.636406495851874,1.56989728039846,0,0.274537029736055,0,0.404364963146632,1.58510321173008,0.421258456238981,0,0.731140468893853,0,0.136499911407986,0,0,0,0,0.876901770507525,0.578775534266688,0,0,0.6196469961995,1.12678241012897,0.573645408816206,0.196498082026242,0.7133421029625,0.709522128141196,0.422215270595328,0,0,0.349934720244983,0.0962221127255121,0,1.08890984861323,0,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0.222886768554957,0,0,0.296964680832639,0,0,0,0.667852230137435,0,0,0.796991953004279,0,0,0,0,0.311039587661807,0.179736702294654,0.358042349351218,0,0,0,0,0,0.185536196323703,0,0,0.349839999984783,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0.21787692703798,0.278847488557207,0.153900517007594,0.797594390929008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| |||
|short_description=p1@CU674966 | |||
}} |
Revision as of 06:13, 11 January 2014
Short description: | p1@CU674966 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CU674966_5end |
Coexpression cluster: | C325_Mast_Eosinophils_CD14_immature_Basophils_granulocyte_Natural |
Association with transcript: | 270bp_to_CU674966_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.03e-39 | 76 |
bone element | 1.95e-37 | 82 |
hematopoietic system | 3.95e-33 | 98 |
blood island | 3.95e-33 | 98 |
skeletal element | 4.50e-33 | 90 |
immune system | 5.50e-30 | 93 |
hemolymphoid system | 6.17e-29 | 108 |
skeletal system | 1.33e-28 | 100 |
connective tissue | 1.05e-20 | 371 |
lateral plate mesoderm | 1.48e-15 | 203 |
musculoskeletal system | 2.53e-15 | 167 |
mesoderm | 2.87e-09 | 315 |
mesoderm-derived structure | 2.87e-09 | 315 |
presumptive mesoderm | 2.87e-09 | 315 |