FFCP PHASE1:Hg19::chr11:18548370..18548377,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7251 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15971 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-2bp_to_ENST00000542488_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_4_at_TSG101_5end | |||
|id=chr11:18548370..18548377,- | |||
|ontology_enrichment_celltype=CL:0002057!2.43e-26!42;CL:0000860!9.76e-24!45;CL:0000766!2.40e-21!76;CL:0002009!1.68e-17!65;CL:0000557!8.80e-17!71;CL:0002194!1.69e-16!63;CL:0000576!1.69e-16!63;CL:0000040!1.69e-16!63;CL:0000559!1.69e-16!63;CL:0000839!9.10e-16!70;CL:0000763!5.28e-14!112;CL:0000049!5.28e-14!112;CL:0000548!6.22e-10!679;CL:0000004!6.22e-10!679;CL:0000255!6.22e-10!679;CL:0000012!6.96e-10!682;CL:0000738!1.58e-09!140;CL:0000144!6.34e-09!625;CL:0000003!9.20e-08!722;CL:0000094!3.83e-07!8;CL:0000063!6.02e-07!578;CL:0000081!8.02e-07!11;CL:0002371!8.95e-07!591 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.48e-51;33!CL:0002057;3.48e-51;33!CL:0000473;6.58e-37;39!CL:0000234;6.58e-37;39!CL:0000576;5.93e-34;48!CL:0000766;2.89e-29;69!CL:0000094;6.02e-21;8!CL:0000081;2.65e-18;11!CL:0000763;4.81e-12;100!CL:0002393;1.60e-10;6!CL:0002397;1.60e-10;6!CL:0002087;6.30e-10;104!CL:0000775;2.79e-09;3!CL:0000767;2.83e-08;3!CL:0000738;5.92e-08;136!CL:0002166;2.12e-07;3!CL:0000771;8.61e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.88e-66,42;CL:0002057,1.88e-66,42;CL:0000766,1.34e-60,72;CL:0000473,3.86e-60,48;CL:0000234,3.86e-60,48;CL:0002009,5.31e-47,61;CL:0002194,6.32e-46,59;CL:0000576,6.32e-46,59;CL:0000040,6.32e-46,59;CL:0000559,6.32e-46,59;CL:0000557,2.19e-44,67;CL:0000839,1.81e-42,66;CL:0000763,2.83e-38,108;CL:0000049,2.83e-38,108;CL:0000738,1.93e-32,136;CL:0000988,3.90e-24,177;CL:0000037,1.02e-23,168;CL:0002087,8.36e-23,115;CL:0002032,1.03e-22,161;CL:0000837,1.03e-22,161;CL:0002031,1.95e-21,120;CL:0000094,4.42e-21,8;CL:0000081,2.40e-18,11;CL:0002393,1.18e-12,9;CL:0002397,1.18e-12,9;CL:0000775,2.85e-09,3;CL:0000034,1.13e-08,441;CL:0000723,1.40e-08,433;CL:0000767,2.07e-08,3;CL:0000048,2.19e-08,427;CL:0002166,8.32e-08,3;CL:0000134,3.48e-07,354;CL:0002320,8.27e-07,361;CL:0000771,8.55e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;7.09e-52;42!CL:0000049;6.12e-12;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.90e-13!102;UBERON:0003061!1.90e-13!102;UBERON:0002371!2.64e-13!80;UBERON:0002193!4.84e-13!112;UBERON:0001474!8.24e-12!86;UBERON:0002405!3.48e-10!115;UBERON:0004765!4.13e-10!101;UBERON:0001434!4.13e-10!101;UBERON:0003081!1.01e-09!216;UBERON:0002204!1.28e-08!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.09e-38,76;UBERON:0004765,4.00e-36,90;UBERON:0002390,8.97e-36,98;UBERON:0003061,8.97e-36,98;UBERON:0002193,1.17e-34,108;UBERON:0001474,2.51e-34,82;UBERON:0002405,2.14e-32,93;UBERON:0001434,2.26e-31,100;UBERON:0002204,1.16e-20,167;UBERON:0003081,1.64e-18,203;UBERON:0000926,1.40e-08,315;UBERON:0004120,1.40e-08,315;UBERON:0006603,1.40e-08,315 | |||
|phase1_expression=0.726713517082227,0.856402095563933,0.422863212287913,0,0,0,0,0,0.522371256399677,0.245733936501509,0,0.436882744260345,0,0.247532705920093,0,0.672325146451775,0.602694528023977,0,0,0,0,0,0,0,0.125542639594803,0.0764134057479513,0.328402357799783,0.0787107813136792,4.32700704533794,2.68680578668049,1.39334510984468,0,0,0.369754010166788,0.0774672005803016,0,0.880801318004542,3.32397245119126,2.60707781711184,2.82114131930607,0,0.647787332037959,0,2.18097358169347,4.1566353805769,1.21292030593908,1.85943229524548,3.70051099219643,2.47765096716083,1.7261543539329,3.07392847834921,1.6553756092201,1.37898272294647,4.51839278508678,2.70852973188684,2.63539275359647,4.09359225086769,2.9214052977861,2.14258724659632,7.70229664982625,6.39337125799041,0.329851300186716,2.19410023383795,0.852449501065388,3.19230162491442,3.40431134814684,0.622822248995575,0.75374599577023,3.12889751052121,2.82345498116652,2.42159801053347,8.83866326370155,5.06339819905415,0.845021145247767,1.27562579979026,2.09658645508376,1.57260083605093,0.750884464207532,2.25015821375912,1.14005097496499,0.59675003159727,1.64397738388171,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,1.12101712596307,0,0,0,0.205601498999509,0.167186495390678,0.32592226663359,0,0,0.445641827540694,0.589211814949674,0.443067789167242,0,0.384273959177026,0,0,0.276350017785848,0.579606171470105,0.14828656316206,0,0,0.226618685395132,0.383220493601921,0,0.506039384039006,0,0,0,0.301150238155546,0,0,0.473554504088034,0,0,0,0.434473211648397,2.43806866313962,0,0.12786256184353,0,0,0,0.795285947051099,0.486634870302636,0.0945348171640679,0,0,0.196468613246569,0,0,0.649094787309367,0.522389211897802,0.398873881556595,0,0,0,0.596287222100115,0.860234595106124,0.694281003215189,0,0.419499436209906,0.275118041940067,0.626984899610432,0.516833518338658,1.06729878806013,1.00416183829401,0.402829317109147,2.28081631715554,0.976248230192678,0.735326160691737,0.81014194788176,0.17859945656816,0.673588117878509,0,0,0,0,22.4026709641308,19.3890132074163,0,0.496971951695318,0.759783069987479,0.264818361626438,0,0,0,0,0.74000264525148,0.311211035399766,0.808264032418128,0.980771418680752,0.605429710579726,0.576175924479999,0,0.312160076830321,0,0.149448680551801,0,0,0.140450806702248,0.204154171254893,0,0.309977343527296,0,0,0,0,0.168336113954066,0,0.277064115484183,0,0,0,0.340296549480063,0.179389635688862,0,0.211931901159562,0.300091096084402,0.309157587715317,0,0,0,0.487185025805993,0,0.368199594569197,0,0.355009592516614,0.403008392910561,0,0.57978255948989,0.545492241181669,0.573609190778008,0.365921118388786,0.662648841607426,0.580969714347592,0.414644220061482,0.756962552626885,0,1.56449532329816,0,0,0.464367928031979,0.721879481669586,0.354920400119532,0.168584690078102,0,0.110293972732394,0.217879444092406,0.237270619111097,0.269662616320329,0.392442930250692,0.769494313892781,0.738155454624648,0,0,0,1.26755034821831,0,0.590789906681404,0,0.491953754172454,0.343135620597051,0.439001141634502,1.1240175325762,0.201057944823262,0.277765335475589,0.325808305310325,0,1.44331342025273,0.115930404975077,0.821860859650752,0.866198686566443,0.462985512576611,0,0,0,0.246217006087397,0.234004265139238,0.148631162288728,1.87467667973554,1.34385702559088,1.70130116690864,1.07470227243418,0.290633938513962,0,1.47798971368783,0.528290604079356,0,0.432359860250884,0.12624243342638,0.63497894292169,0.381988425558278,0,0,0.205654985406647,0.600686115687835,0.571652865261156,0.112131084345361,0,0.51336800074665,0.517086863031111,0,0,0.531876233169741,1.04007436911366,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0.301439377059586,0,0.099972991182057,1.2162378064119,0,0,0.958499421966331,0,0,0.434343920002738,0,0,0,0.788123040807709,0.646882724578552,1.41177339907723,1.01637849688985,2.60279707715243,0,0.335032530668698,0,8.23907726341901,5.9832291840805,22.3784377255459,0.12269149171914,0,0.542530047399471,0,0.535286966391485,0.788512075169673,0.468565659970853,1.20378439891088,0,0,0,0.184369168541703,0.260650843404249,0,0,0.82707210449155,2.15714200818617,1.921096040462,0.303127571446259,0,0.604780586659361,0.248107807818777,0.153461973288062,0.280660094433074,0.128139149255701,0,0.482561763430822,0,0.154209693802656,0.355123450626254,0.0821271560138091,0,0.348631135379878,0.846016147141356,0.802025881213139,0.184161977871793,0.114814448164607,0.364182336013434,0.131124414959424,0,0.308061348417659,0,0,0.105551628892876,0,0.170093705276516,0.863663664408557,0,0,0,0.254876273045038,0,0,0,0.261435451024901,0,0,0.325378394664303,0.515205058238611,0.0915694648183434,0.082509499920588,0,0.650060246036521,0,0.290012154876366,0,0.15350367472613,0.137836572484531,0.107420244868274,0,0.255679882248303,0.356128142586949,0.495854746082934,0.960950336825531,0.510450849978337,0.6069466851333,0.929691098594572,1.25924938732256,0,0.308033580176089,2.12922412126809,0,0.74129687641568,0.572499546967965,0.372158369359667,0.316379424718726,0.38126038784765,0,0,0,0,0,0.274537029736055,0.1178124023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| |||
|short_description=p4@TSG101 | |||
}} |
Revision as of 06:52, 11 January 2014
Short description: | p4@TSG101 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TSG101_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -2bp_to_ENST00000542488_5end |
EntrezGene: | TSG101 |
HGNC: | 15971 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.09e-38 | 76 |
skeletal element | 4.00e-36 | 90 |
hematopoietic system | 8.97e-36 | 98 |
blood island | 8.97e-36 | 98 |
hemolymphoid system | 1.17e-34 | 108 |
bone element | 2.51e-34 | 82 |
immune system | 2.14e-32 | 93 |
skeletal system | 2.26e-31 | 100 |
musculoskeletal system | 1.16e-20 | 167 |
lateral plate mesoderm | 1.64e-18 | 203 |
mesoderm | 1.40e-08 | 315 |
mesoderm-derived structure | 1.40e-08 | 315 |
presumptive mesoderm | 1.40e-08 | 315 |