FFCP PHASE1:Hg19::chr11:28792916..28792929,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C277 | |||
|description=CAGE_peak_at_chr11:28792916..28792929,+ | |||
|id=chr11:28792916..28792929,+ | |||
|ontology_enrichment_celltype=CL:0000077!7.46e-21!19;CL:0000864!1.57e-12!1;CL:0000091!1.57e-12!1;CL:1000306!8.87e-12!4;CL:0002547!8.87e-12!4;CL:0000213!6.27e-09!57;CL:0000215!6.27e-09!57;CL:0000076!3.73e-08!62;CL:0000054!5.73e-07!2;CL:0000137!5.73e-07!2;CL:0000092!5.73e-07!2;CL:0002097!8.06e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000054;6.96e-21;2!CL:0000137;6.96e-21;2!CL:0000092;6.96e-21;2!CL:0000077;1.31e-19;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000054,6.96e-21,2;CL:0000137,6.96e-21,2;CL:0000092,6.96e-21,2;CL:0000077,1.31e-19,19;CL:0000213,5.78e-07,58;CL:0000215,5.78e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060085!1.11e-12!1;DOID:3165!1.11e-12!1;DOID:0060121!1.11e-12!1;DOID:2438!1.11e-12!1;DOID:4418!1.11e-12!1;DOID:3571!1.57e-12!1;DOID:200!5.73e-07!2;DOID:4305!5.73e-07!2;DOID:3350!6.80e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:0060085;3.30e-40;1!DOID:3165;3.30e-40;1!DOID:0060121;3.30e-40;1!DOID:2438;3.30e-40;1!DOID:4418;3.30e-40;1!DOID:200;6.96e-21;2!DOID:4305;6.96e-21;2!DOID:0060072;3.79e-11;4!DOID:201;7.25e-08;6!DOID:0060100;7.25e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,3.30e-40,1;DOID:3165,3.30e-40,1;DOID:0060121,3.30e-40,1;DOID:2438,3.30e-40,1;DOID:4418,3.30e-40,1;DOID:200,6.96e-21,2;DOID:4305,6.96e-21,2;DOID:0060072,3.79e-11,4;DOID:201,7.25e-08,6;DOID:0060100,7.25e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0001282!9.92e-13!1;UBERON:0009842!9.92e-13!1;UBERON:0003704!9.92e-13!1;UBERON:0001171!9.92e-13!1;UBERON:0001172!9.92e-13!1;UBERON:0001280!3.09e-12!4;UBERON:0004647!3.09e-12!4;UBERON:0000415!8.87e-12!4;UBERON:0007240!8.87e-12!4;UBERON:0005742!8.87e-12!4;UBERON:0005734!8.87e-12!4;UBERON:0004664!8.87e-12!4;UBERON:0004663!8.87e-12!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001282;2.21e-40;1!UBERON:0009842;2.21e-40;1!UBERON:0003704;2.21e-40;1!UBERON:0001171;2.21e-40;1!UBERON:0001172;2.21e-40;1!UBERON:0001280;1.83e-14;3!UBERON:0004647;1.83e-14;3!UBERON:0002394;3.42e-11;4!UBERON:0003928;3.42e-11;4!UBERON:0000014;3.79e-11;4!UBERON:0002294;6.04e-07;7!UBERON:0001173;6.04e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,2.21e-40,1;UBERON:0009842,2.21e-40,1;UBERON:0003704,2.21e-40,1;UBERON:0001171,2.21e-40,1;UBERON:0001172,2.21e-40,1;UBERON:0001280,1.83e-14,3;UBERON:0004647,1.83e-14,3;UBERON:0005171,1.83e-14,3;UBERON:0000014,3.79e-11,4;UBERON:0002394,6.78e-08,6;UBERON:0003928,6.78e-08,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.30431961956303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38457534043588,0,0,0,0,0,0,0,0,0.14405479798815,0.49701014226173,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385239660814607,0,0.260994291965212,0,0,112.823620777482,10.3871527827263,0,0,0,38.0040655393702,0.337884881306145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.955538938977433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.803892390468535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:28792916..28792929,+ | |||
}} |
Revision as of 07:02, 11 January 2014
Short description: | p@chr11:28792916..28792929, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:28792916..28792929, + |
Coexpression cluster: | C277_mesothelioma_epithelioid_thyroid_extraskeletal_alveolar_glioblastoma_adenocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone matrix secreting cell | 6.96e-21 | 2 |
osteocyte | 6.96e-21 | 2 |
osteoclast | 6.96e-21 | 2 |
mesothelial cell | 1.31e-19 | 19 |
lining cell | 5.78e-07 | 58 |
barrier cell | 5.78e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 2.21e-40 | 1 |
acinus | 2.21e-40 | 1 |
intrahepatic bile duct | 2.21e-40 | 1 |
portal lobule | 2.21e-40 | 1 |
hepatic acinus | 2.21e-40 | 1 |
liver parenchyma | 1.83e-14 | 3 |
liver lobule | 1.83e-14 | 3 |
hepatic duct | 1.83e-14 | 3 |
zone of skin | 3.79e-11 | 4 |
bile duct | 6.78e-08 | 6 |
digestive system duct | 6.78e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 3.30e-40 | 1 |
skin benign neoplasm | 3.30e-40 | 1 |
integumentary system benign neoplasm | 3.30e-40 | 1 |
dermis tumor | 3.30e-40 | 1 |
cutaneous fibrous histiocytoma | 3.30e-40 | 1 |
giant cell tumor | 6.96e-21 | 2 |
bone giant cell tumor | 6.96e-21 | 2 |
benign neoplasm | 3.79e-11 | 4 |
connective tissue cancer | 7.25e-08 | 6 |
musculoskeletal system cancer | 7.25e-08 | 6 |