FFCP PHASE1:Hg19::chr12:7168041..7168058,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=716 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1247 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000488701_5end | |||
|coexpression_cluster_id=C424 | |||
|description=CAGE_peak_2_at_C1S_5end | |||
|id=chr12:7168041..7168058,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.26e-22!180;CL:0000057!1.28e-17!75;CL:0000680!1.07e-10!57;CL:0000056!1.07e-10!57;CL:0000355!1.07e-10!57;CL:0000187!1.58e-10!54;CL:0000183!3.45e-09!59;CL:0000192!3.57e-09!42;CL:0000514!3.57e-09!42;CL:0000393!6.21e-09!60;CL:0000211!6.21e-09!60;CL:0000136!1.82e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0000192;1.66e-07;43!CL:0000057;5.18e-07;73!CL:0000136;7.73e-07;13!CL:0002334;9.55e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.04e-18,76;CL:0000680,5.97e-11,58;CL:0000056,5.97e-11,58;CL:0000355,5.97e-11,58;CL:0000187,9.87e-11,55;CL:0000192,8.37e-10,43;CL:0000514,8.37e-10,43;CL:0000393,2.78e-08,61;CL:0000211,2.78e-08,61;CL:0000136,6.91e-08,15;CL:0002334,9.50e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000514;1.66e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!4.84e-14!365;UBERON:0000914!3.75e-13!83;UBERON:0002329!3.75e-13!83;UBERON:0003077!3.75e-13!83;UBERON:0003059!3.75e-13!83;UBERON:0007282!3.75e-13!83;UBERON:0009618!3.75e-13!83;UBERON:0007285!3.75e-13!83;UBERON:0000481!6.63e-13!347;UBERON:0005256!3.54e-12!143;UBERON:0002385!4.17e-12!63;UBERON:0001015!4.17e-12!63;UBERON:0000383!4.17e-12!63;UBERON:0004290!1.90e-11!70;UBERON:0001134!1.95e-11!61;UBERON:0002036!1.95e-11!61;UBERON:0003082!1.95e-11!61;UBERON:0002100!1.35e-10!216;UBERON:0003104!1.03e-09!238;UBERON:0009142!1.03e-09!238;UBERON:0000486!1.17e-09!82;UBERON:0007100!1.11e-08!27;UBERON:0000468!2.34e-08!659;UBERON:0007023!3.68e-08!115;UBERON:0000948!4.05e-08!24;UBERON:0005498!4.05e-08!24;UBERON:0004140!4.05e-08!24;UBERON:0009881!4.05e-08!24;UBERON:0004141!4.05e-08!24;UBERON:0003084!4.05e-08!24;UBERON:0007005!4.05e-08!24;UBERON:0004139!4.05e-08!24;UBERON:0004291!4.05e-08!24;UBERON:0003102!4.72e-08!95;UBERON:0000477!1.27e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;4.41e-09;25!UBERON:0000948;2.18e-08;22!UBERON:0002384;7.68e-07;198 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005256,4.64e-13,122;UBERON:0002385,1.52e-12,64;UBERON:0001015,1.52e-12,64;UBERON:0000383,1.52e-12,64;UBERON:0003104,3.81e-12,160;UBERON:0009142,3.81e-12,160;UBERON:0001134,8.55e-12,62;UBERON:0002036,8.55e-12,62;UBERON:0003082,8.55e-12,62;UBERON:0007524,3.25e-11,73;UBERON:0002329,3.59e-11,71;UBERON:0003059,3.59e-11,71;UBERON:0007282,3.59e-11,71;UBERON:0004290,3.59e-11,71;UBERON:0009618,3.59e-11,71;UBERON:0003077,8.99e-11,72;UBERON:0007285,8.99e-11,72;UBERON:0007100,8.28e-10,27;UBERON:0002100,1.85e-09,199;UBERON:0000486,1.93e-09,83;UBERON:0000948,3.71e-09,24;UBERON:0005498,3.71e-09,24;UBERON:0004140,3.71e-09,24;UBERON:0009881,3.71e-09,24;UBERON:0004141,3.71e-09,24;UBERON:0003084,3.71e-09,24;UBERON:0007005,3.71e-09,24;UBERON:0004139,3.71e-09,24;UBERON:0004291,3.71e-09,24;UBERON:0007503,1.17e-08,78;UBERON:0004872,5.01e-07,83 | |||
|phase1_expression=27.7967920283952,18.6267455785155,37.4938714895283,52.0381151436278,66.1502419752386,41.8722491568177,5.06599756336621,27.1639545573537,32.1258322685801,0.491467873003018,0,0,0,3.21792517696121,6.62794751455832,12.101852636132,11.4511960324556,9.49403117503585,7.80692478064811,0.984968464614303,0,0.313454721478088,0.85870796139317,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,1.66198622559563,0,0,1.11957737119962,0.647787332037959,0.77272670290256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,3.02699751316684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.9426179682566,6.70700859703636,19.051521714686,21.686349143074,22.560205978615,28.6796107542431,37.3784395114017,53.5298357332899,0.0945348171640679,0,0.087834785693126,3.99486180268024,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.4364109856017,12.4097901431288,35.4856604579426,101.54016374508,12.4133933769425,10.6528744027038,2.1349799145941,2.22000793575444,7.46906484959439,3.09834545760283,3.26923806226917,9.53551794163068,5.76175924479999,1.17160715916898,1.24864030732128,0.570471821544449,3.58676833324323,0.23486899728753,0.161872944368132,0,2.44985005505872,0.491337269247072,4.44300859055791,96.2282314398463,47.4752504214829,2.73048408581408,3.59309070908119,0.168336113954066,0.125118519871964,2.21651292387346,5.70670907145089,6.12975591598039,46.4235602021384,3.85669422744072,5.56107870635472,17.298148494304,26.2795557437857,9.60291507470087,13.4998813302355,11.3361837620077,12.0975956615533,8.77636927654584,9.15907848515267,8.07788077581166,21.9999257755095,71.7708492275525,7.10019185033229,2.21654616100809,5.76506013855658,0.386521706326594,1.63647672354501,0,0.365921118388786,0,0.116193942869518,0.207322110030741,0,0,10.9514672630871,7.07565032012174,2.76269842704961,10.6804623447355,4.33127689001751,2.36613600079688,1.85443159085912,0.482022059766964,1.32352767278873,0.871517776369625,1.89816495288877,1.07865046528132,0.98110732562673,1.15424147083917,0,0,13.1703683626048,7.3504355692771,173.654397705908,88.4544495009863,133.518518909997,0,0.245976877086227,2.05881372358231,0.109750285408626,0,0.201057944823262,0.0925884451585296,0.651616610620649,2.07986957055916,0,0.231860809950154,2.23076519048061,0.433099343283221,0,0.570762456703795,0,0,0.984868024349589,0,0.148631162288728,5.62403003920662,0.503946384596579,0.992425680696705,0.0895585227028483,0,0,0,0,0,0.288239906833923,0.37872730027914,0.190493682876507,0,0,6.84289784090821,0,0.300343057843917,0,0.448524337381443,7.41132117016576,0,17.0638664800267,3.57656445851882,0.845302752556,14.6265964121679,5.2003718455683,0.257207374262142,0,0,25.3071048774921,7.05408087008876,2.46972101034231,4.23457039581856,29.1421397968888,3.16780749173372,39.4885583948058,36.6044052612123,30.2918163281633,0,0,0,0.239624855491583,6.89171615004683,0,1.73737568001095,1.02738161275192,2.50685348535854,0,0,0,0,0,2.60279707715243,0,0.167516265334349,0.637938751653163,0,0,0,12.0237661884757,1.00034104211935,2.44138521329762,20.3811444300191,9.8135943838439,16.4010511635292,29.1682123331856,5.11608369537122,18.1926003244788,9.31257641632544,1.99267679560631,0.737476674166813,17.2898392791485,1.56640925970192,3.43143423810856,0,0,0,0,0,0,11.6610669674825,23.6331438863616,15.9976253826852,17.2987851495196,35.8195074346692,20.5893019063818,23.7468906311986,3.08419387605311,5.14929003408069,4.84550220481474,5.19254429183621,4.41599438147845,0,0.200506470303285,0,33.6406333122298,9.10455840033585,55.7278763577553,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0.512900250232778,1.31205858279882,0.650756789328606,41.8346507289752,0,0,0,0,56.2393754454558,4.25351160485337,2.00263202249038,1.38153307253517,0.413509717453592,4.61907052933577,2.0302337147992,0.93749290157711,10.3277161350215,0.330569830721956,0.384380134730212,0.893288987462089,0.708104465988849,0.464845549297286,34.6293581513704,3.485186350803,18.1739812303892,1.06461206063404,1.73986598415015,2.40921484835096,1.43124886741991,1.48863347743867,1.89827654831236,19.2536495863063,1.02359116524534,9.41465773674625,5.09125196681499,3.92474320099615,10.9722199125822,6.03981465419321,5.77280771493864,2.62837226045311,1.58510321173008,5.47635993110675,3.90106991271672,45.5744225610502,6.33900880540533,18.97348768571,29.4123298463723,21.4715421578461,6.61638412255349,4.64407282668854,9.64591947558278,7.52408194546694,10.4943160327461,0.405820753925408,1.239293992399,0.281695602532241,1.14729081763241,2.65272410735427,0,2.12856638442359,45.3881415889978,74.0913509159779,0,0.349934720244983,0.0962221127255121,0,0,39.8228277285776,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.96255619048879,0,0,0,0.23874448473769,0,0,0,0.984685914873589,0.556543525114529,0,0.211125408127993,6.37593562403423,9.39365312805902,0,0.306806047506464,0,11.5084647434869,0,1.79021174675609,0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| |||
|short_description=p2@C1S | |||
}} |
Revision as of 11:51, 11 January 2014
Short description: | p2@C1S |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_C1S_5end |
Coexpression cluster: | C424_Hepatocyte_liver_Synoviocyte_tenocyte_Fibroblast_Adipocyte_Cardiac |
Association with transcript: | 0bp_to_ENST00000488701_5end |
EntrezGene: | C1S |
HGNC: | 1247 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.04e-18 | 76 |
muscle precursor cell | 5.97e-11 | 58 |
myoblast | 5.97e-11 | 58 |
multi-potent skeletal muscle stem cell | 5.97e-11 | 58 |
muscle cell | 9.87e-11 | 55 |
smooth muscle cell | 8.37e-10 | 43 |
smooth muscle myoblast | 8.37e-10 | 43 |
electrically responsive cell | 2.78e-08 | 61 |
electrically active cell | 2.78e-08 | 61 |
fat cell | 6.91e-08 | 15 |
preadipocyte | 9.50e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
trunk mesenchyme | 4.64e-13 | 122 |
muscle tissue | 1.52e-12 | 64 |
musculature | 1.52e-12 | 64 |
musculature of body | 1.52e-12 | 64 |
mesenchyme | 3.81e-12 | 160 |
entire embryonic mesenchyme | 3.81e-12 | 160 |
skeletal muscle tissue | 8.55e-12 | 62 |
striated muscle tissue | 8.55e-12 | 62 |
myotome | 8.55e-12 | 62 |
dense mesenchyme tissue | 3.25e-11 | 73 |
somite | 3.59e-11 | 71 |
presomitic mesoderm | 3.59e-11 | 71 |
presumptive segmental plate | 3.59e-11 | 71 |
dermomyotome | 3.59e-11 | 71 |
trunk paraxial mesoderm | 3.59e-11 | 71 |
paraxial mesoderm | 8.99e-11 | 72 |
presumptive paraxial mesoderm | 8.99e-11 | 72 |
primary circulatory organ | 8.28e-10 | 27 |
trunk | 1.85e-09 | 199 |
multilaminar epithelium | 1.93e-09 | 83 |
heart | 3.71e-09 | 24 |
primitive heart tube | 3.71e-09 | 24 |
primary heart field | 3.71e-09 | 24 |
anterior lateral plate mesoderm | 3.71e-09 | 24 |
heart tube | 3.71e-09 | 24 |
heart primordium | 3.71e-09 | 24 |
cardiac mesoderm | 3.71e-09 | 24 |
cardiogenic plate | 3.71e-09 | 24 |
heart rudiment | 3.71e-09 | 24 |
epithelial vesicle | 1.17e-08 | 78 |
splanchnic layer of lateral plate mesoderm | 5.01e-07 | 83 |