FFCP PHASE1:Hg19::chr12:53242770..53242783,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=196374 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28926 | |||
|TSSclassifier=strong | |||
|UniProt=Q8N1N4,B4DQ49 | |||
|association_with_transcript=0bp_to_ENST00000304620,ENST00000539860,NM_173352,uc001sbc.1_5end | |||
|coexpression_cluster_id=C60 | |||
|description=CAGE_peak_1_at_KRT78_5end | |||
|id=chr12:53242770..53242783,- | |||
|ontology_enrichment_celltype=CL:0002368!1.03e-17!13;CL:0002076!1.39e-16!43;CL:0000622!3.33e-16!5;CL:0002159!9.01e-14!13;CL:0000154!1.93e-13!6;CL:0002202!3.08e-12!9;CL:0002632!3.08e-12!9;CL:0000223!6.06e-11!59;CL:0002623!8.04e-11!3;CL:0000068!3.91e-10!3;CL:0000069!3.91e-10!3;CL:0000307!3.91e-10!3;CL:0000377!3.91e-10!3;CL:0000362!3.22e-09!8;CL:0000150!7.95e-09!9;CL:0000575!1.09e-07!2;CL:0001014!2.92e-07!2;CL:0001016!2.92e-07!2;CL:0002077!3.41e-07!33;CL:0000317!4.37e-07!2;CL:1000448!4.37e-07!2;CL:0002308!4.37e-07!2;CL:0002140!4.37e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000622;2.19e-18;5!CL:0002623;5.96e-18;3!CL:0000154;2.37e-15;6!CL:0000575;1.77e-12;2!CL:0001014;8.81e-12;2!CL:0001016;8.81e-12;2!CL:0000150;2.81e-10;9!CL:0002202;3.67e-10;9!CL:0002632;3.67e-10;9!CL:0002328;1.63e-08;3!CL:0000307;2.42e-08;3!CL:0002368;4.63e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000622,1.96e-18,5;CL:0002623,5.17e-18,3;CL:0000154,2.16e-15,6;CL:0000575,1.87e-12,2;CL:0001014,1.07e-11,2;CL:0001016,1.07e-11,2;CL:0000150,2.64e-10,9;CL:0002202,3.54e-10,9;CL:0002632,3.54e-10,9;CL:0002328,1.43e-08,3;CL:0000068,2.60e-08,3;CL:0000069,2.60e-08,3;CL:0000307,2.60e-08,3;CL:0000377,2.60e-08,3;CL:0002076,1.88e-07,42;CL:0002368,4.52e-07,13 | |||
|ontology_enrichment_development_v019=CL:0000377;2.42e-08;3!UBERON:0009143;2.22e-07;1!UBERON:0004874;7.36e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001004!7.67e-19!72;UBERON:0000166!1.36e-13!21;UBERON:0007196!1.63e-13!14;UBERON:0001558!1.63e-13!14;UBERON:0000065!7.65e-13!53;UBERON:0003126!1.87e-11!7;UBERON:0001005!1.87e-11!7;UBERON:0004119!2.54e-11!169;UBERON:0000925!2.54e-11!169;UBERON:0006595!2.54e-11!169;UBERON:0003408!5.91e-11!10;UBERON:0000161!2.02e-10!35;UBERON:0000165!1.18e-09!28;UBERON:0000930!1.18e-09!28;UBERON:0003102!3.90e-09!95;UBERON:0001044!4.30e-09!6;UBERON:0003293!4.30e-09!6;UBERON:0003294!4.30e-09!6;UBERON:0010047!4.30e-09!6;UBERON:0000167!4.30e-09!6;UBERON:0005178!5.47e-09!34;UBERON:0002224!5.47e-09!34;UBERON:0000072!7.64e-09!46;UBERON:0005181!1.15e-08!35;UBERON:0001444!2.36e-08!48;UBERON:0000078!3.05e-08!18;UBERON:0001041!5.24e-08!98;UBERON:0001042!6.48e-08!10;UBERON:0009145!6.48e-08!10;UBERON:0000077!8.70e-08!130;UBERON:0003127!9.28e-08!2;UBERON:0001007!1.12e-07!155;UBERON:0001555!1.12e-07!155;UBERON:0007026!1.12e-07!155;UBERON:0000341!1.24e-07!2;UBERON:0000974!2.12e-07!10;UBERON:0001003!3.04e-07!14;UBERON:0007376!3.04e-07!14;UBERON:0007383!3.04e-07!14;UBERON:0006562!3.71e-07!11;UBERON:0002419!4.37e-07!2;UBERON:0007771!4.37e-07!2;UBERON:0003297!4.37e-07!2;UBERON:0001821!4.37e-07!2;UBERON:0003487!4.37e-07!2;UBERON:0001820!4.37e-07!2;UBERON:0005089!4.37e-07!2;UBERON:0005088!4.37e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001044;1.86e-15;6!UBERON:0003293;1.86e-15;6!UBERON:0003294;1.86e-15;6!UBERON:0010047;1.86e-15;6!UBERON:0003408;1.86e-15;6!UBERON:0000167;1.86e-15;6!UBERON:0003126;3.81e-13;7!UBERON:0001005;3.81e-13;7!UBERON:0007196;4.61e-13;15!UBERON:0001558;4.61e-13;15!UBERON:0003127;1.49e-12;2!UBERON:0000341;2.64e-12;2!UBERON:0000165;4.83e-12;28!UBERON:0000161;2.34e-10;19!UBERON:0000166;2.34e-10;19!UBERON:0001041;3.98e-10;14!UBERON:0001723;6.42e-09;3!UBERON:0001033;6.42e-09;3!UBERON:0000153;8.90e-09;54!UBERON:0007811;1.36e-08;52!UBERON:0004815;1.63e-08;3!UBERON:0002031;1.63e-08;3!UBERON:0002372;2.36e-07;1!UBERON:0001961;2.36e-07;1!UBERON:0001744;2.36e-07;1!UBERON:0001042;2.36e-07;1!UBERON:0001735;2.36e-07;1!UBERON:0005795;4.51e-07;1!UBERON:0007029;7.36e-07;1!UBERON:0006834;7.36e-07;1!UBERON:0000989;7.36e-07;1!UBERON:0008811;7.36e-07;1!UBERON:0005178;7.82e-07;34!UBERON:0002224;7.82e-07;34!UBERON:0000033;9.43e-07;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000166,1.20e-15,22;UBERON:0001044,1.93e-15,6;UBERON:0003293,1.93e-15,6;UBERON:0003294,1.93e-15,6;UBERON:0010047,1.93e-15,6;UBERON:0000167,1.93e-15,6;UBERON:0003126,3.93e-13,7;UBERON:0001005,3.93e-13,7;UBERON:0007196,4.37e-13,15;UBERON:0001558,4.37e-13,15;UBERON:0003127,1.41e-12,2;UBERON:0000341,2.35e-12,2;UBERON:0001004,3.32e-12,74;UBERON:0000165,1.43e-11,29;UBERON:0000930,1.43e-11,29;UBERON:0000153,6.12e-11,62;UBERON:0007811,6.12e-11,62;UBERON:0001041,5.24e-10,87;UBERON:0001444,6.03e-10,49;UBERON:0003408,2.60e-09,10;UBERON:0000161,4.41e-09,36;UBERON:0001723,6.42e-09,3;UBERON:0001033,6.42e-09,3;UBERON:0010056,6.42e-09,3;UBERON:0004815,1.43e-08,3;UBERON:0002031,1.43e-08,3;UBERON:0000033,1.77e-08,56;UBERON:0000072,2.08e-08,47;UBERON:0005178,2.35e-07,34;UBERON:0002224,2.35e-07,34;UBERON:0002372,2.36e-07,1;UBERON:0001961,2.36e-07,1;UBERON:0001744,2.36e-07,1;UBERON:0001735,2.36e-07,1;UBERON:0000065,3.99e-07,54;UBERON:0005181,4.04e-07,35;UBERON:0003102,4.67e-07,99;UBERON:0000989,6.76e-07,1;UBERON:0008811,6.76e-07,1;UBERON:0006258,6.76e-07,1;UBERON:0005876,6.76e-07,1;UBERON:0004874,6.76e-07,1;UBERON:0007029,7.15e-07,1;UBERON:0006834,7.57e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.0330546937471,3.91567694411725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.654895377488563,6.19301990097322,6.67411997011973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.25173876959253,0.818238361772504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.768251997860379,2.24803506515239,0.201057944823262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21251028578504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460404944679482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29706215198469,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0.960950336825531,0.255225424989168,0.50578890427775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.865999014529609,12.0654409596442,1.08890984861323,0,0,0,3.10401107475673,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.1623345421307,0,2.45728561679386,0,0,0,0,0,1.19548792950642,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0.762760950878299,0,0,0,0,0,0,0,0,0,0,0,4.60098356119391,36.5513727893036,0,0,0,0,0.638002319463839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195984794828755,0,0,0,0,0,0,494.353017041474,0,2.25980740780532,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0.604651252380536,0,0,0,0,0,0,0,0,0,0,0,0,1.1248694577575,3.0952078182318,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,2.51783113895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.47347824872506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,3.52267479077163,13.8281966446099,85.7161980649474,3.01159151174194,0,0,0,0,0,0,0,0,0,0,0,0,3.39997695141398,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,611.981528055815,1.42838658878244,0.645889098360061,0.558672428662721,0,0,0.606351566874658,197.904523838338,388.092563430709,472.878764215419,22.0904392609443,4.65724499164419,0,0,0,0,0,3.17827754875453,6.91723503136755,0,0,0 | |||
|short_description=p1@KRT78 | |||
}} |
Revision as of 13:39, 11 January 2014
Short description: | p1@KRT78 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KRT78_5end |
Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
Association with transcript: | 0bp_to_ENST00000304620, ENST00000539860, NM_173352, uc001sbc.1_5end |
EntrezGene: | KRT78 |
HGNC: | 28926 |
UniProt: | Q8N1N4B4DQ49 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell | 1.96e-18 | 5 |
acinar cell of salivary gland | 5.17e-18 | 3 |
protein secreting cell | 2.16e-15 | 6 |
corneal epithelial cell | 1.87e-12 | 2 |
CD1a-positive Langerhans cell | 1.07e-11 | 2 |
immature CD1a-positive Langerhans cell | 1.07e-11 | 2 |
glandular epithelial cell | 2.64e-10 | 9 |
epithelial cell of tracheobronchial tree | 3.54e-10 | 9 |
epithelial cell of lower respiratory tract | 3.54e-10 | 9 |
bronchial epithelial cell | 1.43e-08 | 3 |
duct epithelial cell | 2.60e-08 | 3 |
branched duct epithelial cell | 2.60e-08 | 3 |
tracheal epithelial cell | 2.60e-08 | 3 |
tracheoblast | 2.60e-08 | 3 |
endo-epithelial cell | 1.88e-07 | 42 |
respiratory epithelial cell | 4.52e-07 | 13 |