FFCP PHASE1:Hg19::chr12:65362955..65362961,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C186 | |||
|description=CAGE_peak_at_chr12:65362955..65362961,- | |||
|id=chr12:65362955..65362961,- | |||
|ontology_enrichment_celltype=CL:0000066!7.19e-18!254;CL:0002368!1.05e-12!13;CL:0000076!1.71e-11!62;CL:0000223!7.38e-10!59;CL:0002076!1.45e-09!43;CL:0000220!3.27e-09!246;CL:0002321!5.33e-09!248;CL:0002202!1.28e-08!9;CL:0002632!1.28e-08!9;CL:0000548!1.96e-07!679;CL:0000004!1.96e-07!679;CL:0000255!1.96e-07!679;CL:0000012!3.03e-07!682 | |||
|ontology_enrichment_celltype_v019=CL:0002202;1.30e-23;9!CL:0002632;1.30e-23;9!CL:0002368;5.46e-22;13!CL:0000307;6.50e-19;3!CL:0000317;4.66e-13;2!CL:1000448;4.66e-13;2!CL:0002308;4.66e-13;2!CL:0002140;4.66e-13;2!CL:0002076;4.71e-09;42!CL:0002328;4.88e-09;3!CL:0002336;3.96e-07;1!CL:0002261;3.96e-07;1!CL:0002170;3.96e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002202,1.62e-23,9;CL:0002632,1.62e-23,9;CL:0002368,6.23e-22,13;CL:0000068,5.29e-19,3;CL:0000069,5.29e-19,3;CL:0000307,5.29e-19,3;CL:0000377,5.29e-19,3;CL:0000317,4.97e-13,2;CL:1000448,4.97e-13,2;CL:0002308,4.97e-13,2;CL:0002140,4.97e-13,2;CL:0002076,2.18e-12,42;CL:0002328,4.60e-09,3;CL:0000066,1.44e-08,253;CL:0000223,1.73e-08,58;CL:0000076,1.14e-07,63;CL:0002336,6.97e-07,1;CL:0002261,6.97e-07,1;CL:0002170,6.97e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000377;6.50e-19;3 | |||
|ontology_enrichment_disease=DOID:14566!3.20e-17!239;DOID:0050687!4.14e-17!143;DOID:162!5.40e-16!235;DOID:305!1.69e-14!106;DOID:1749!2.33e-11!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;6.24e-15;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,4.83e-15,14 | |||
|ontology_enrichment_uberon=UBERON:0000065!3.13e-07!53 | |||
|ontology_enrichment_uberon_v019=UBERON:0007196;5.85e-14;15!UBERON:0001558;5.85e-14;15!UBERON:0002419;4.66e-13;2!UBERON:0007771;4.66e-13;2!UBERON:0003297;4.66e-13;2!UBERON:0001821;4.66e-13;2!UBERON:0003487;4.66e-13;2!UBERON:0001820;4.66e-13;2!UBERON:0004815;4.88e-09;3!UBERON:0002031;4.88e-09;3!UBERON:0003126;2.18e-08;7!UBERON:0001005;2.18e-08;7!UBERON:0005178;1.44e-07;34!UBERON:0002224;1.44e-07;34!UBERON:0007195;3.96e-07;1!UBERON:0004913;3.96e-07;1!UBERON:0003703;3.96e-07;1!UBERON:0001174;3.96e-07;1!UBERON:0004914;3.96e-07;1!UBERON:0003343;6.88e-07;4!UBERON:0004785;6.88e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007196,6.66e-14,15;UBERON:0001558,6.66e-14,15;UBERON:0002419,4.97e-13,2;UBERON:0007771,4.97e-13,2;UBERON:0003297,4.97e-13,2;UBERON:0001821,4.97e-13,2;UBERON:0003487,4.97e-13,2;UBERON:0001820,4.97e-13,2;UBERON:0005089,4.97e-13,2;UBERON:0005088,4.97e-13,2;UBERON:0004815,4.60e-09,3;UBERON:0002031,4.60e-09,3;UBERON:0003126,2.00e-08,7;UBERON:0001005,2.00e-08,7;UBERON:0005178,9.28e-08,34;UBERON:0002224,9.28e-08,34;UBERON:0005181,1.64e-07,35;UBERON:0000065,1.80e-07,54;UBERON:0007195,5.19e-07,1;UBERON:0004913,6.57e-07,1;UBERON:0003703,6.57e-07,1;UBERON:0001174,6.57e-07,1;UBERON:0004914,6.57e-07,1;UBERON:0000072,6.59e-07,47;UBERON:0008947,7.52e-07,38;UBERON:0003258,7.52e-07,38;UBERON:0003343,8.34e-07,4;UBERON:0004785,8.34e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,2.09340350391728,0,0,0.247532705920093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,1.204823675113,4.06729411183466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0.0945348171640679,0.221729397462564,0,0,0.364295288292542,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0,0.117434498643765,0,0.280901613404497,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0.330881918197182,0,0,0.269662616320329,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0.703702806881416,1.01847289674383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.283550194484773,1.43293636324557,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.36669142910475,0.129271715757778,0,0,0,0,0.514414748524284,0,0.266422179016099,0,0,0.823240336780769,0,0,1.58390374586686,0,0,0.099972991182057,0,0,0,0,0,0,0.289562613335158,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.616838775210622,0,0.492762936082855,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0.895499018888713,0,0,0,0,0,0,0,0,1.14853107599234,3.25030123018261,0,0.193341436584244,0.462145851343933,0.307007349452259,1.10269257987624,0,0,0.170453254832202,0,0.661139661443912,0.192190067365106,3.95599408733211,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.78494864019923,0,0,0,0,0,0,0.48763373908959,0,0,0,0.141405431953713,0,0,0,0,0,0,0.405820753925408,0,0,0.143411352204052,0,0,0.709522128141196,0,0,0,0,1.53955380360819,2.01090682660736,7.62236894029258,0,0,1.68471475667626,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0.33307196799782,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0.329607748453519,0,0,0,0,0,0,0,0,0,0,0,0,1.11136990144637,0,0,0,0,0.174919999992391,0,1.70690172428249,1.01701460117107,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0.227884111694002,0,0,0,0,0,0,0,0,0,0.225595660617181,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0.569219092059585,0,0,0.195984794828755,1.65412492502765,0,0,0,0.0730893170861856,0,0,0,0,2.74083849293502,0.993573058514948,0,0,1.04206466326994,0,0.19980960958213,0,0,0,0.288109595976299,0.124252535565433,0.235694034616795,0.951329442515298,0,0.203996435272644,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0.0824158583811665,0,0.0984274815147488,0.508039992394707,0,0,0,0.137539436597234,0.415440338029185,0,0,0,0,0,0,0.528001682597033,0,0.767660789277781,0,0,0,0.542999601753713,0,0,1.19730191562487,0.410462603746695,0,0.113312091520126,0,0,0,0,0.171086837884329,1.40963004463334,0,0,0,0,0,0,2.55336503108073,0,0,0,0,0,0,0,0,0,0,0,0,1.49976489554528,1.81978941049977,0.570930667089935,0.235265819698172,0,0,0.597019211547496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0.761610424337591,0,0,0,0,0,3.20022211730523,0,0,0,0,0.857766365499703,0,0.226705925512272,0.694567422971502,0,0.179088841081487,0.308801447160972,0.438568099157414,0.176689145945881,0,0.675769762612291,0.76872455576384,0,0.303859956177382,0,0,0,0,0.327609848846413,0.245772908753719,0.211312123358627,0,0.106691729694141,0,1.13503190713367,0.368211900503681,0,0,0,0,0,0,0.169732529954025,0,0,1.11728983594649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353909170043221,2.56800037930351,1.03973099535304,0,0,0,0,0,0,0,0.982631505060581,1.03499260351932,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0,0.115233987555779,0.514464028312255,0,0,0,0.667388411352415,0,0,0.280272163313789,0,0.863710364874486,0,0,0,0,0,0,0,0,0,0,0.236664001461131,0.170426809518315,0,0.4582137370881,0,0,0,0,0.365753774946808,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.357107877211315,15.1744794837747,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,3.81248332774086,0,0,0,0,0,0,0,0,0,0,0.179650404213174,0,0,0,0,0,0 | |||
|short_description=p@chr12:65362955..65362961,- | |||
}} |
Revision as of 14:24, 11 January 2014
Short description: | p@chr12:65362955..65362961, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:65362955..65362961, - |
Coexpression cluster: | C186_squamous_papillotubular_large_Tracheal_oral_Small_epidermoid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of tracheobronchial tree | 1.62e-23 | 9 |
epithelial cell of lower respiratory tract | 1.62e-23 | 9 |
respiratory epithelial cell | 6.23e-22 | 13 |
duct epithelial cell | 5.29e-19 | 3 |
branched duct epithelial cell | 5.29e-19 | 3 |
tracheal epithelial cell | 5.29e-19 | 3 |
tracheoblast | 5.29e-19 | 3 |
sebum secreting cell | 4.97e-13 | 2 |
epithelial cell of sweat gland | 4.97e-13 | 2 |
epithelial cell of skin gland | 4.97e-13 | 2 |
acinar cell of sebaceous gland | 4.97e-13 | 2 |
endo-epithelial cell | 2.18e-12 | 42 |
bronchial epithelial cell | 4.60e-09 | 3 |
epithelial cell | 1.44e-08 | 253 |
endodermal cell | 1.73e-08 | 58 |
squamous epithelial cell | 1.14e-07 | 63 |
buccal mucosa cell | 6.97e-07 | 1 |
endothelial cell of viscerocranial mucosa | 6.97e-07 | 1 |
keratinized cell of the oral mucosa | 6.97e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
tracheobronchial tree | 6.66e-14 | 15 |
lower respiratory tract | 6.66e-14 | 15 |
skin gland | 4.97e-13 | 2 |
epidermis gland | 4.97e-13 | 2 |
gland of integumental system | 4.97e-13 | 2 |
sebaceous gland | 4.97e-13 | 2 |
skin sebaceous gland | 4.97e-13 | 2 |
sweat gland | 4.97e-13 | 2 |
sweat gland placode | 4.97e-13 | 2 |
sebaceous gland placode | 4.97e-13 | 2 |
lower respiratory tract epithelium | 4.60e-09 | 3 |
epithelium of bronchus | 4.60e-09 | 3 |
trachea | 2.00e-08 | 7 |
respiratory airway | 2.00e-08 | 7 |
thoracic cavity element | 9.28e-08 | 34 |
thoracic cavity | 9.28e-08 | 34 |
thoracic segment organ | 1.64e-07 | 35 |
respiratory tract | 1.80e-07 | 54 |
stroma of bone marrow | 5.19e-07 | 1 |
hepatopancreatic ampulla | 6.57e-07 | 1 |
extrahepatic bile duct | 6.57e-07 | 1 |
common bile duct | 6.57e-07 | 1 |
duodenal papilla | 6.57e-07 | 1 |
segment of respiratory tract | 6.59e-07 | 47 |
respiratory primordium | 7.52e-07 | 38 |
endoderm of foregut | 7.52e-07 | 38 |
mucosa of oral region | 8.34e-07 | 4 |
respiratory system mucosa | 8.34e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 4.83e-15 | 14 |