FFCP PHASE1:Hg19::chr12:69747735..69747742,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C501 | |||
|description=CAGE_peak_at_chr12:69747735..69747742,+ | |||
|id=chr12:69747735..69747742,+ | |||
|ontology_enrichment_celltype=CL:0002194!7.36e-83!63;CL:0000576!7.36e-83!63;CL:0000040!7.36e-83!63;CL:0000559!7.36e-83!63;CL:0002009!5.70e-80!65;CL:0002057!3.11e-79!42;CL:0000839!1.85e-73!70;CL:0000860!2.91e-73!45;CL:0000766!3.06e-73!76;CL:0000557!2.88e-72!71;CL:0000763!8.43e-53!112;CL:0000049!8.43e-53!112;CL:0002087!1.67e-44!119;CL:0000738!1.38e-39!140;CL:0002031!2.21e-36!124;CL:0000037!1.59e-34!172;CL:0000566!1.59e-34!172;CL:0000988!6.80e-32!182;CL:0002032!9.98e-32!165;CL:0000837!9.98e-32!165;CL:0000134!1.66e-12!358;CL:0002320!5.27e-12!365;CL:0002393!1.40e-10!9;CL:0002397!1.40e-10!9;CL:0000219!3.03e-10!390;CL:0000842!1.06e-08!3;CL:0000048!3.66e-08!430;CL:0000723!7.19e-08!436;CL:0000034!1.71e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.45e-33;33!CL:0002057;6.45e-33;33!CL:0000473;1.36e-32;39!CL:0000234;1.36e-32;39!CL:0000576;1.46e-19;48!CL:0000766;2.81e-16;69!CL:0000763;1.06e-12;100!CL:0000235;8.76e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,4.19e-43,48;CL:0000234,4.19e-43,48;CL:0000860,1.27e-37,42;CL:0002057,1.27e-37,42;CL:0002194,5.73e-34,59;CL:0000576,5.73e-34,59;CL:0000040,5.73e-34,59;CL:0000559,5.73e-34,59;CL:0002009,8.67e-33,61;CL:0000839,3.80e-30,66;CL:0000557,1.15e-29,67;CL:0000766,1.88e-27,72;CL:0000763,4.86e-20,108;CL:0000049,4.86e-20,108;CL:0002087,2.77e-16,115;CL:0002031,1.69e-15,120;CL:0000738,2.28e-13,136;CL:0002032,1.53e-12,161;CL:0000837,1.53e-12,161;CL:0000037,6.68e-12,168;CL:0000988,3.75e-11,177;CL:0000235,9.15e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;9.44e-31;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!7.46e-63!80;UBERON:0001474!1.16e-57!86;UBERON:0002390!2.07e-56!102;UBERON:0003061!2.07e-56!102;UBERON:0002193!2.94e-50!112;UBERON:0004765!2.32e-47!101;UBERON:0001434!2.32e-47!101;UBERON:0002405!2.50e-46!115;UBERON:0002204!3.06e-25!167;UBERON:0003081!2.35e-22!216;UBERON:0002384!2.54e-11!375;UBERON:0000926!5.08e-11!448;UBERON:0004120!5.08e-11!448;UBERON:0006603!5.08e-11!448;UBERON:0003127!2.90e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0003127;1.20e-18;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.87e-26,76;UBERON:0001474,7.94e-24,82;UBERON:0004765,1.69e-21,90;UBERON:0002405,1.00e-20,93;UBERON:0002390,1.52e-19,98;UBERON:0003061,1.52e-19,98;UBERON:0001434,4.20e-19,100;UBERON:0003127,1.56e-18,2;UBERON:0002193,1.67e-17,108;UBERON:0002204,2.15e-10,167;UBERON:0003081,2.46e-09,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0.464448369948228,0,0,0,0,0,0,0.553995408531877,1.80490002723128,2.38711957787437,0.447830948479849,0,0.257575567634187,0.436194716338694,0.377875943688809,0.727752183563449,1.85943229524548,0.411167888021826,0.929119112685311,2.8769239232215,2.81776777182011,0.709446689665756,2.75796544589295,0.645484683583826,0,0.188242339542605,0,0.674170453335254,0.306083892370903,0.320929027076094,1.91801137739712,1.9791078011203,1.19678194572979,1.27867425159808,0.290209238628584,1.70215567407342,0,1.7587406567972,0.521482918420201,0.868755378820466,2.42159801053347,0.736555271975129,0.949387162322653,0.633765858935825,0.212604299965044,0,1.01095768031846,0.750884464207532,0.803627933485401,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,0.696518949197069,0.398873881556595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47730203652438,0.468008530278475,0.891786973732369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.43335757932127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.431428401637234,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.403599414382095,5.11015485228392,0,0.307240764308458,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.59022384726391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.41981432097328,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472699093843342,0.164831716762333,0.26961417541674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.65168194123259,0.917458566809082,0,0,0,0,4.2322147241232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.852935927603924,0,0,0,0,0,0,0,0.342233301085281,0,2.15166616178029,2.66128285236811,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:69747735..69747742,+ | |||
}} |
Revision as of 14:35, 11 January 2014
Short description: | p@chr12:69747735..69747742, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_at_chr12:69747735..69747742, + |
Coexpression cluster: | C501_CD14_trachea_throat_Basophils_acute_Peripheral_Macrophage |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 4.19e-43 | 48 |
phagocyte | 4.19e-43 | 48 |
classical monocyte | 1.27e-37 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.27e-37 | 42 |
monopoietic cell | 5.73e-34 | 59 |
monocyte | 5.73e-34 | 59 |
monoblast | 5.73e-34 | 59 |
promonocyte | 5.73e-34 | 59 |
macrophage dendritic cell progenitor | 8.67e-33 | 61 |
myeloid lineage restricted progenitor cell | 3.80e-30 | 66 |
granulocyte monocyte progenitor cell | 1.15e-29 | 67 |
myeloid leukocyte | 1.88e-27 | 72 |
myeloid cell | 4.86e-20 | 108 |
common myeloid progenitor | 4.86e-20 | 108 |
nongranular leukocyte | 2.77e-16 | 115 |
hematopoietic lineage restricted progenitor cell | 1.69e-15 | 120 |
leukocyte | 2.28e-13 | 136 |
hematopoietic oligopotent progenitor cell | 1.53e-12 | 161 |
hematopoietic multipotent progenitor cell | 1.53e-12 | 161 |
hematopoietic stem cell | 6.68e-12 | 168 |
hematopoietic cell | 3.75e-11 | 177 |
macrophage | 9.15e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.87e-26 | 76 |
bone element | 7.94e-24 | 82 |
skeletal element | 1.69e-21 | 90 |
immune system | 1.00e-20 | 93 |
hematopoietic system | 1.52e-19 | 98 |
blood island | 1.52e-19 | 98 |
skeletal system | 4.20e-19 | 100 |
open tracheal system trachea | 1.56e-18 | 2 |
hemolymphoid system | 1.67e-17 | 108 |
musculoskeletal system | 2.15e-10 | 167 |
lateral plate mesoderm | 2.46e-09 | 203 |