FFCP PHASE1:Hg19::chr12:106632425..106632429,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=10970 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=16991 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=389bp_to_BC015436_5end | |||
|description=CAGE_peak_11_at_CKAP4_5end | |||
|id=chr12:106632425..106632429,- | |||
|ontology_enrichment_celltype=CL:0000055!1.06e-20!180;CL:0000222!2.13e-12!119;CL:0000548!1.40e-11!679;CL:0000004!1.40e-11!679;CL:0000255!1.40e-11!679;CL:0000012!5.72e-11!682;CL:0000144!6.32e-11!625;CL:0000680!7.47e-11!57;CL:0000056!7.47e-11!57;CL:0000355!7.47e-11!57;CL:0000183!2.56e-10!59;CL:0000192!2.99e-10!42;CL:0000514!2.99e-10!42;CL:0000057!3.24e-10!75;CL:0000359!3.61e-10!32;CL:0000187!1.74e-09!54;CL:0000220!2.45e-09!246;CL:0002321!2.46e-09!248;CL:0002371!2.87e-09!591;CL:0000393!3.18e-09!60;CL:0000211!3.18e-09!60 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.29e-10;32!CL:0000192;3.59e-08;43!CL:0002539;4.08e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,1.58e-11,43;CL:0000514,1.58e-11,43;CL:0000359,4.25e-11,32;CL:0000680,5.46e-11,58;CL:0000056,5.46e-11,58;CL:0000355,5.46e-11,58;CL:0000048,5.29e-10,427;CL:0000723,1.50e-09,433;CL:0000034,5.67e-09,441;CL:0000187,1.12e-08,55;CL:0000057,1.22e-08,76;CL:0000393,2.85e-07,61;CL:0000211,2.85e-07,61;CL:0002539,4.10e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000514;3.59e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!1.25e-12!79;UBERON:0007798!1.25e-12!79;UBERON:0000055!9.27e-12!69;UBERON:0001637!1.17e-11!42;UBERON:0003509!1.17e-11!42;UBERON:0004572!1.17e-11!42;UBERON:0001981!1.86e-11!60;UBERON:0007500!1.86e-11!60;UBERON:0004537!1.86e-11!60;UBERON:0006965!1.86e-11!60;UBERON:0004290!1.08e-10!70;UBERON:0000486!1.12e-10!82;UBERON:0004872!1.62e-10!84;UBERON:0000914!3.28e-10!83;UBERON:0002329!3.28e-10!83;UBERON:0003077!3.28e-10!83;UBERON:0003059!3.28e-10!83;UBERON:0007282!3.28e-10!83;UBERON:0009618!3.28e-10!83;UBERON:0007285!3.28e-10!83;UBERON:0001134!1.08e-09!61;UBERON:0002036!1.08e-09!61;UBERON:0003082!1.08e-09!61;UBERON:0002385!2.22e-09!63;UBERON:0001015!2.22e-09!63;UBERON:0000383!2.22e-09!63;UBERON:0005256!3.72e-09!143;UBERON:0003914!8.69e-09!118;UBERON:0004573!9.22e-09!33;UBERON:0004571!9.22e-09!33;UBERON:0000490!2.58e-08!138;UBERON:0004535!9.34e-08!110;UBERON:0000947!1.73e-07!21;UBERON:0010191!1.73e-07!21;UBERON:0001009!2.66e-07!113;UBERON:0002100!3.33e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;6.85e-11;42!UBERON:0003509;6.85e-11;42!UBERON:0004572;6.85e-11;42!UBERON:0004573;9.93e-11;33!UBERON:0004571;9.93e-11;33!UBERON:0001135;2.81e-07;15!UBERON:0000947;3.31e-07;21!UBERON:0010191;3.31e-07;21!UBERON:0004237;4.08e-07;10!UBERON:0004695;4.08e-07;10!UBERON:0002111;4.08e-07;10!UBERON:0004178;4.08e-07;10!UBERON:0002385;6.18e-07;31!UBERON:0001015;6.18e-07;31!UBERON:0000383;6.18e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,5.50e-15,42;UBERON:0003509,5.50e-15,42;UBERON:0004572,5.50e-15,42;UBERON:0004573,3.03e-12,33;UBERON:0004571,3.03e-12,33;UBERON:0007524,4.70e-12,73;UBERON:0002329,1.97e-11,71;UBERON:0003059,1.97e-11,71;UBERON:0007282,1.97e-11,71;UBERON:0004290,1.97e-11,71;UBERON:0009618,1.97e-11,71;UBERON:0003077,3.66e-11,72;UBERON:0007285,3.66e-11,72;UBERON:0001134,8.92e-11,62;UBERON:0002036,8.92e-11,62;UBERON:0003082,8.92e-11,62;UBERON:0000486,2.30e-10,83;UBERON:0002385,3.22e-10,64;UBERON:0001015,3.22e-10,64;UBERON:0000383,3.22e-10,64;UBERON:0007500,1.02e-09,59;UBERON:0001981,1.02e-09,59;UBERON:0004537,1.02e-09,59;UBERON:0006965,1.02e-09,59;UBERON:0007503,1.06e-09,78;UBERON:0000055,2.13e-09,68;UBERON:0005256,5.77e-09,122;UBERON:0003498,2.37e-08,5;UBERON:0005985,2.37e-08,5;UBERON:0000490,6.93e-08,148;UBERON:0003104,7.91e-08,160;UBERON:0009142,7.91e-08,160;UBERON:0000947,2.27e-07,21;UBERON:0010191,2.27e-07,21;UBERON:0001135,3.75e-07,15;UBERON:0004872,4.05e-07,83;UBERON:0004237,4.10e-07,10;UBERON:0004695,4.10e-07,10;UBERON:0002111,4.10e-07,10;UBERON:0004178,4.10e-07,10 | |||
|phase1_expression=0.363356758541113,0.642301571672949,0.281908808191942,1.0007329835313,0,0.872338524100369,0,0.631719873426831,0,0.737201809504527,0,0,0.263766978228454,0.495065411840187,0.331397375727916,1.34465029290355,1.20538905604795,1.46062018077475,2.43966399395253,0.369363174230364,0.612002073732759,0.940364164434263,0.286235987131057,0.273748850145768,0.251085279189606,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0.553995408531877,0.200544447470142,0.651032612147555,0,0,0,0.436194716338694,0.755751887377619,0.485168122375632,0.232429036905685,0,0,0.28769239232215,0.512321413058201,0.709446689665756,0.344745680736619,0,0,0.564727018627814,0.272906150057846,0.449446968890169,0.306083892370903,0.320929027076094,0,0.659702600373432,0.997318288108159,1.27867425159808,2.61188314765726,1.13477044938228,0.622822248995575,1.00499466102697,1.0429658368404,0.434377689410233,0,0.736555271975129,0.632924774881769,0,0,0,0.112328631146495,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,1.80719576192283,2.00535164254356,1.15877215168659,0.795285947051099,0.973269740605272,0.567208902984407,0.886917589850256,0.702678285545008,0.0654895377488563,1.09288586487763,0.370784442784429,0,0,0,0,0,0,0.39752481473341,1.72046919021225,0,0.56530794192401,0.419499436209906,1.10047216776027,0.417989933073621,0.258416759169329,0,0.33472061276467,1.20848795132744,0,0.488124115096339,0.367663080345869,0.81014194788176,0.0892997282840798,0.22452937262617,0.337834441449967,0,0.949265659568129,0.549605231791222,0,3.87780264148325,0.436094052142534,0.993943903390637,2.5326102332916,0.662045904066094,2.86836620748814,1.41867352879343,1.12135520028461,0,0.98667019366864,0,0.538842688278752,0.490385709340376,0.454072282934794,0.576175924479999,0.234321431833797,0.624320153660641,0.570471821544449,1.34503812496621,0.117434498643765,0.161872944368132,0.280901613404497,0,0.368502951935304,0.206651562351531,0,1.48360157567134,0,1.43723628363248,0.336672227908132,0.250237039743928,0,1.31693286264251,1.22595118319608,0,1.13432183160021,1.25572744982203,0.640672166455702,1.05965950579781,1.80054657650641,0.721367704669072,1.28820270022815,0.37223371266318,2.86919764810153,0.292311015483596,1.00973509697646,0.552299391853796,0.323292113637624,2.84007674013291,0.604512589365842,1.18692414617341,0.193260853163297,0.272746120590835,0.286804595389004,0.243947412259191,0.132529768321485,0.116193942869518,0.207322110030741,0,0,1.56449532329816,2.57296375277154,0,0,1.44375896333917,0.118306800039844,0.168584690078102,0.241011029883482,0.661763836394364,0,0,0.539325232640658,0.196221465125346,0.769494313892781,0.738155454624648,0,1.2347220339942,0,0,0,0,0,0,0.514703430895577,0.219500570817251,0,0.804231779293047,0.277765335475589,1.3032332212413,1.03993478527958,0,0.34779121492523,0.234817388471643,0.577465791044295,0.462985512576611,0.380508304469197,1.58040879591855,0,0.246217006087397,0.234004265139238,0,0,0.16798212819886,0.141775097242386,0.358234090811393,0.290633938513962,0,0,0.088048434013226,0,0,0,0.190493682876507,0,0,0,0.205654985406647,0,0,0.112131084345361,0.43596006883328,0,1.42198887333556,0,0.845302752556,0.797814349754612,2.08014873822732,0.514414748524284,2.83698264046557,1.3321108950805,0.57191197463259,1.08524321078289,2.46972101034231,1.30294473717494,1.06617584622764,1.58390374586686,0.602878754119172,0,0.599837947092342,0,0,0,0.239624855491583,0,0,1.44781306667579,2.26023954805422,1.43248770591916,0,0.197030760201927,0,0,0,0,0,0.167516265334349,0.637938751653163,1.49801404789436,11.966458368161,0,0.12269149171914,0,0.271265023699736,1.66376689224646,1.42743191037729,0.473107245101804,0.937131319941706,0.300946099727719,0,0,1.32845119707087,1.84369168541703,0.868836144680828,0.391602314925481,1.02943027143257,0,0,0,0,0,0.604780586659361,0.992431231275107,0.306923946576125,1.40330047216537,0.384417447767103,2.55853624533352,2.41280881715411,5.93672265779964,0.462629081407967,1.06537035187876,0.739144404124282,0.519254429183621,0.348631135379878,0,0.40101294060657,0.460404944679482,2.29628896329214,1.82091168006717,2.09799063935079,0.902399225814824,0.385076685522074,0,0,0.316654886678627,0,0.340187410553031,0.863663664408557,0,0.541892875087706,0.501689773854853,0.254876273045038,0,0.895499018888713,0,0,1.02580050046556,0.328014645699706,0.325378394664303,0,0.183138929636687,0.082509499920588,0,0,3.21367859688319,0,0.308097234229289,1.22802939780904,0.827019434907183,0.644521469209642,0.435050081742686,0.511359764496605,0.445160178233687,0.661139661443912,0.192190067365106,0.127612712494584,0.10115778085555,0.929691098594572,1.88887408098384,2.0911118104818,0.924100740528266,1.06461206063404,0.869932992075073,1.29726953372744,0.858749320451947,0.372158369359667,0.949138274156178,0.38126038784765,0.255897791311334,0.855877976067841,0,3.92474320099615,2.33834194858309,1.09814811894422,0.353437207037059,1.819642334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| |||
|short_description=p11@CKAP4 | |||
}} |
Revision as of 15:39, 11 January 2014
Short description: | p11@CKAP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_CKAP4_5end |
Coexpression cluster: | NA |
Association with transcript: | 389bp_to_BC015436_5end |
EntrezGene: | CKAP4 |
HGNC: | 16991 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 1.58e-11 | 43 |
smooth muscle myoblast | 1.58e-11 | 43 |
vascular associated smooth muscle cell | 4.25e-11 | 32 |
muscle precursor cell | 5.46e-11 | 58 |
myoblast | 5.46e-11 | 58 |
multi-potent skeletal muscle stem cell | 5.46e-11 | 58 |
multi fate stem cell | 5.29e-10 | 427 |
somatic stem cell | 1.50e-09 | 433 |
stem cell | 5.67e-09 | 441 |
muscle cell | 1.12e-08 | 55 |
fibroblast | 1.22e-08 | 76 |
electrically responsive cell | 2.85e-07 | 61 |
electrically active cell | 2.85e-07 | 61 |
aortic smooth muscle cell | 4.10e-07 | 10 |