FFCP PHASE1:Hg19::chr12:106696583..106696651,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=255394 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28627 | |||
|TSSclassifier=strong | |||
|UniProt=G3V1Z2,F8VU20,F8VRQ3 | |||
|association_with_transcript=0bp_to_ENST00000546625,ENST00000549906,ENST00000553098_5end | |||
|coexpression_cluster_id=C3227 | |||
|description=CAGE_peak_1_at_TCP11L2_5end | |||
|id=chr12:106696583..106696651,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.08e-10!140;CL:0000791!2.82e-10!18;CL:0000789!2.82e-10!18;CL:0002420!2.82e-10!18;CL:0002419!2.82e-10!18;CL:0000790!2.82e-10!18;CL:0002031!1.18e-08!124;CL:0002057!1.21e-08!42;CL:0002087!9.64e-08!119;CL:0000625!1.04e-07!11;CL:0000860!1.86e-07!45 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.10e-10;18!CL:0000789;1.10e-10;18!CL:0002419;1.10e-10;18!CL:0000625;6.51e-08;11!CL:0000236;3.22e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.39e-11,136;CL:0000791,1.64e-10,18;CL:0000789,1.64e-10,18;CL:0002420,1.64e-10,18;CL:0002419,1.64e-10,18;CL:0000790,1.64e-10,18;CL:0002031,1.43e-09,120;CL:0000860,8.59e-09,42;CL:0002057,8.59e-09,42;CL:0002087,1.19e-08,115;CL:0000625,7.09e-08,11;CL:0000766,6.57e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000790;1.10e-10;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.57e-28!115;UBERON:0001049!4.79e-11!57;UBERON:0005068!4.79e-11!57;UBERON:0006241!4.79e-11!57;UBERON:0007135!4.79e-11!57;UBERON:0002616!6.75e-09!59;UBERON:0003080!2.82e-08!42;UBERON:0002780!5.16e-08!41;UBERON:0001890!5.16e-08!41;UBERON:0006240!5.16e-08!41;UBERON:0000955!1.95e-07!69;UBERON:0006238!1.95e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;9.19e-08;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.23e-28,114;UBERON:0001049,6.57e-11,56;UBERON:0005068,6.57e-11,56;UBERON:0006241,6.57e-11,56;UBERON:0007135,6.57e-11,56;UBERON:0000073,9.12e-10,53;UBERON:0002616,9.12e-10,53;UBERON:0002780,3.54e-08,41;UBERON:0001890,3.54e-08,41;UBERON:0003080,3.54e-08,41;UBERON:0006240,3.54e-08,41;UBERON:0002193,2.76e-07,108;UBERON:0000955,3.80e-07,68;UBERON:0006238,3.80e-07,68;UBERON:0002390,8.31e-07,98;UBERON:0003061,8.31e-07,98 | |||
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| |||
|short_description=p1@TCP11L2 | |||
}} |
Revision as of 15:41, 11 January 2014
Short description: | p1@TCP11L2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TCP11L2_5end |
Coexpression cluster: | C3227_Neutrophils_Whole_Reticulocytes_blood_Eosinophils_CD4_CD19 |
Association with transcript: | 0bp_to_ENST00000546625, ENST00000549906, ENST00000553098_5end |
EntrezGene: | TCP11L2 |
HGNC: | 28627 |
UniProt: | G3V1Z2F8VU20F8VRQ3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 2.39e-11 | 136 |
mature alpha-beta T cell | 1.64e-10 | 18 |
alpha-beta T cell | 1.64e-10 | 18 |
immature T cell | 1.64e-10 | 18 |
mature T cell | 1.64e-10 | 18 |
immature alpha-beta T cell | 1.64e-10 | 18 |
hematopoietic lineage restricted progenitor cell | 1.43e-09 | 120 |
classical monocyte | 8.59e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.59e-09 | 42 |
nongranular leukocyte | 1.19e-08 | 115 |
CD8-positive, alpha-beta T cell | 7.09e-08 | 11 |
myeloid leukocyte | 6.57e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.23e-28 | 114 |
neural tube | 6.57e-11 | 56 |
neural rod | 6.57e-11 | 56 |
future spinal cord | 6.57e-11 | 56 |
neural keel | 6.57e-11 | 56 |
regional part of nervous system | 9.12e-10 | 53 |
regional part of brain | 9.12e-10 | 53 |
regional part of forebrain | 3.54e-08 | 41 |
forebrain | 3.54e-08 | 41 |
anterior neural tube | 3.54e-08 | 41 |
future forebrain | 3.54e-08 | 41 |
hemolymphoid system | 2.76e-07 | 108 |
brain | 3.80e-07 | 68 |
future brain | 3.80e-07 | 68 |
hematopoietic system | 8.31e-07 | 98 |
blood island | 8.31e-07 | 98 |