FFCP PHASE1:Hg19::chr12:125399359..125399402,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7316 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12468 | |||
|TSSclassifier=strong | |||
|UniProt=F5H041 | |||
|association_with_transcript=75bp_to_ENST00000541046_5end | |||
|description=CAGE_peak_3_at_UBC_5end | |||
|id=chr12:125399359..125399402,- | |||
|ontology_enrichment_celltype=CL:0000548!1.86e-16!679;CL:0000004!1.86e-16!679;CL:0000255!1.86e-16!679;CL:0000012!8.72e-16!682;CL:0000066!1.33e-13!254;CL:0000063!3.81e-12!578;CL:0000144!3.90e-12!625;CL:0002321!1.31e-11!248;CL:0000076!1.32e-11!62;CL:0000220!1.75e-11!246;CL:0000222!6.07e-11!119;CL:0002057!1.28e-10!42;CL:0002371!3.39e-10!591;CL:0000003!3.68e-10!722;CL:0002139!4.35e-10!24;CL:0000860!2.04e-09!45;CL:0000213!1.51e-08!57;CL:0000215!1.51e-08!57;CL:0000071!1.59e-07!18;CL:0002546!1.59e-07!18;CL:0000359!3.70e-07!32;CL:0002009!5.02e-07!65 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.38e-10;24!CL:0000860;1.76e-10;33!CL:0002057;1.76e-10;33!CL:0000071;8.21e-08;18!CL:0000359;9.35e-08;32!CL:0000473;2.03e-07;39!CL:0000234;2.03e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.79e-12,253;CL:0000076,8.66e-12,63;CL:0000222,1.16e-11,121;CL:0000860,3.36e-11,42;CL:0002057,3.36e-11,42;CL:0002321,5.78e-11,250;CL:0002139,9.69e-11,24;CL:0000213,1.76e-09,58;CL:0000215,1.76e-09,58;CL:0000473,1.91e-09,48;CL:0000234,1.91e-09,48;CL:0002009,3.32e-08,61;CL:0000359,6.09e-08,32;CL:0000071,6.63e-08,18;CL:0002546,6.63e-08,18;CL:0002194,1.60e-07,59;CL:0000576,1.60e-07,59;CL:0000040,1.60e-07,59;CL:0000559,1.60e-07,59;CL:0000766,3.08e-07,72;CL:0000115,4.13e-07,36 | |||
|ontology_enrichment_development_v019=CL:0002057;5.83e-08;42!CL:0002546;8.21e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!4.61e-12!69;UBERON:0001637!1.38e-11!42;UBERON:0003509!1.38e-11!42;UBERON:0004572!1.38e-11!42;UBERON:0002049!1.50e-11!79;UBERON:0007798!1.50e-11!79;UBERON:0000926!2.32e-11!448;UBERON:0004120!2.32e-11!448;UBERON:0006603!2.32e-11!448;UBERON:0003081!1.09e-10!216;UBERON:0004573!1.16e-10!33;UBERON:0004571!1.16e-10!33;UBERON:0001981!1.21e-10!60;UBERON:0007500!1.21e-10!60;UBERON:0004537!1.21e-10!60;UBERON:0006965!1.21e-10!60;UBERON:0004872!1.43e-10!84;UBERON:0000468!7.68e-10!659;UBERON:0000467!7.82e-09!625;UBERON:0000480!9.55e-09!626;UBERON:0003914!1.93e-08!118;UBERON:0000490!3.13e-08!138;UBERON:0004535!1.02e-07!110;UBERON:0001986!1.59e-07!18;UBERON:0004638!1.59e-07!18;UBERON:0004852!1.59e-07!18;UBERON:0001009!2.71e-07!113;UBERON:0002204!6.74e-07!167;UBERON:0000487!9.47e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;7.72e-11;33!UBERON:0004571;7.72e-11;33!UBERON:0001637;8.53e-11;42!UBERON:0003509;8.53e-11;42!UBERON:0004572;8.53e-11;42!UBERON:0000055;1.39e-08;65!UBERON:0007500;1.40e-08;56!UBERON:0001981;1.40e-08;56!UBERON:0004537;1.40e-08;56!UBERON:0000490;4.95e-08;33!UBERON:0004638;8.21e-08;18!UBERON:0001986;8.21e-08;18!UBERON:0004852;8.21e-08;18!UBERON:0000947;1.89e-07;21!UBERON:0010191;1.89e-07;21!UBERON:0000487;4.17e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,2.82e-14,315;UBERON:0004120,2.82e-14,315;UBERON:0006603,2.82e-14,315;UBERON:0000055,4.68e-14,68;UBERON:0002049,6.30e-14,78;UBERON:0007798,6.30e-14,78;UBERON:0007500,3.36e-13,59;UBERON:0001981,3.36e-13,59;UBERON:0004537,3.36e-13,59;UBERON:0006965,3.36e-13,59;UBERON:0003081,4.56e-13,203;UBERON:0004872,5.53e-13,83;UBERON:0001637,6.97e-13,42;UBERON:0003509,6.97e-13,42;UBERON:0004572,6.97e-13,42;UBERON:0004573,1.46e-11,33;UBERON:0004571,1.46e-11,33;UBERON:0003914,3.16e-10,117;UBERON:0004535,1.60e-09,109;UBERON:0000490,5.97e-09,148;UBERON:0001009,1.36e-08,112;UBERON:0004638,6.63e-08,18;UBERON:0001986,6.63e-08,18;UBERON:0004852,6.63e-08,18;UBERON:0002050,9.99e-08,564;UBERON:0005423,3.28e-07,581;UBERON:0002204,3.31e-07,167;UBERON:0000487,3.47e-07,22;UBERON:0000947,3.75e-07,21;UBERON:0010191,3.75e-07,21;UBERON:0000923,5.19e-07,560;UBERON:0010316,5.19e-07,560;UBERON:0005291,5.19e-07,560;UBERON:0006598,5.19e-07,560;UBERON:0010317,5.19e-07,560;UBERON:0002532,5.19e-07,560;UBERON:0000922,5.58e-07,592 | |||
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| |||
|short_description=p3@UBC | |||
}} |
Revision as of 16:39, 11 January 2014
Short description: | p3@UBC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_UBC_5end |
Coexpression cluster: | NA |
Association with transcript: | 75bp_to_ENST00000541046_5end |
EntrezGene: | UBC |
HGNC: | 12468 |
UniProt: | F5H041 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.79e-12 | 253 |
squamous epithelial cell | 8.66e-12 | 63 |
mesodermal cell | 1.16e-11 | 121 |
classical monocyte | 3.36e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.36e-11 | 42 |
embryonic cell | 5.78e-11 | 250 |
endothelial cell of vascular tree | 9.69e-11 | 24 |
lining cell | 1.76e-09 | 58 |
barrier cell | 1.76e-09 | 58 |
defensive cell | 1.91e-09 | 48 |
phagocyte | 1.91e-09 | 48 |
macrophage dendritic cell progenitor | 3.32e-08 | 61 |
vascular associated smooth muscle cell | 6.09e-08 | 32 |
blood vessel endothelial cell | 6.63e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 6.63e-08 | 18 |
monopoietic cell | 1.60e-07 | 59 |
monocyte | 1.60e-07 | 59 |
monoblast | 1.60e-07 | 59 |
promonocyte | 1.60e-07 | 59 |
myeloid leukocyte | 3.08e-07 | 72 |
endothelial cell | 4.13e-07 | 36 |