FFCP PHASE1:Hg19::chr13:30510003..30510027,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |||
|TSSclassifier=weak | |||
|UniProt=Q5TAE0 | |||
|association_with_transcript=-14bp_to_ENST00000400540_5end | |||
|coexpression_cluster_id=C103 | |||
|description=CAGE_peak_1_at_ENST00000400540_5end | |||
|id=chr13:30510003..30510027,+ | |||
|ontology_enrichment_celltype=CL:0000791!2.69e-47!18;CL:0000789!2.69e-47!18;CL:0002420!2.69e-47!18;CL:0002419!2.69e-47!18;CL:0000790!2.69e-47!18;CL:0000084!1.21e-36!25;CL:0000827!1.21e-36!25;CL:0000625!1.94e-32!11;CL:0000624!1.81e-19!6;CL:0000838!4.00e-19!52;CL:0000542!1.15e-18!53;CL:0000051!1.15e-18!53;CL:0002087!7.88e-12!119;CL:0000898!4.33e-11!3;CL:0000738!5.65e-10!140;CL:0000842!1.27e-09!3;CL:0002031!3.09e-08!124;CL:0000815!4.48e-08!2;CL:0000792!4.48e-08!2;CL:0002677!4.48e-08!2;CL:0000224!2.56e-07!4;CL:0000037!6.09e-07!172;CL:0000566!6.09e-07!172 | |||
|ontology_enrichment_celltype_v019=CL:0000791;4.10e-25;18!CL:0000789;4.10e-25;18!CL:0002419;4.10e-25;18!CL:0000898;3.32e-23;3!CL:0000624;4.14e-20;6!CL:0000084;8.59e-18;25!CL:0000815;2.17e-16;2!CL:0000792;2.17e-16;2!CL:0002677;2.17e-16;2!CL:0000625;7.32e-11;11!CL:0000895;1.42e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.02e-25,18;CL:0000789,3.02e-25,18;CL:0002420,3.02e-25,18;CL:0002419,3.02e-25,18;CL:0000790,3.02e-25,18;CL:0000898,1.68e-23,3;CL:0000624,2.40e-20,6;CL:0000084,6.92e-18,25;CL:0000827,6.92e-18,25;CL:0000815,1.48e-16,2;CL:0000792,1.48e-16,2;CL:0002677,1.48e-16,2;CL:0000625,7.62e-11,11;CL:0000810,1.05e-08,1;CL:0000895,1.05e-08,1;CL:0002436,1.05e-08,1;CL:0002427,1.05e-08,1;CL:0002428,1.05e-08,1;CL:0002429,1.05e-08,1;CL:0002433,1.05e-08,1;CL:0002431,1.05e-08,1;CL:0002432,1.05e-08,1;CL:0000838,4.88e-08,52;CL:0000542,7.25e-08,53;CL:0000051,7.25e-08,53 | |||
|ontology_enrichment_development_v019=CL:0000790;4.10e-25;18!CL:0002427;1.42e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!2.02e-23!15;UBERON:0000179!2.02e-23!15;UBERON:0000463!2.02e-23!15;UBERON:0002370!2.62e-07!4;UBERON:0005058!2.62e-07!4;UBERON:0009113!2.62e-07!4;UBERON:0003295!2.62e-07!4;UBERON:0005562!2.62e-07!4;UBERON:0004177!7.18e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.45e-12;15!UBERON:0000179;2.45e-12;15!UBERON:0000463;2.45e-12;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.09e-12,15;UBERON:0000179,3.09e-12,15;UBERON:0000463,3.09e-12,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0.971680998056939,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764546456250458,0,0,0,1.37696839079683,0.393010762749165,0.822405995998037,2.34061093546949,2.93330039970231,2.36723902867367,1.94826728407911,2.22820913770347,3.82987679717288,5.53834736459053,5.41607727530031,1.28091319725675,1.95089021339817,0.328875809207352,0.276350017785848,0.289803085735052,1.33457906845854,1.33770414044857,1.04535523804977,2.03956816855619,1.91610246800961,2.74901956386104,2.78321661221453,1.27426165729639,0.651083453856419,0.950452044448374,1.6563263098555,2.43174561193395,1.24930726552346,0.947109008176067,0.821127996921047,0.201606743224732,0.534880391567015,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591092280605782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03384013061444,0.431428401637234,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,3.82318603571188,0.569647187174163,0.952927101831156,2.46817363851717,0.648473311192717,1.08006287447623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0.103432995861895,0,0,0.193766729508018,0.124149428591716,0,0,0,0,0,0.404112318087525,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p1@ENST00000400540 | |||
}} |
Revision as of 17:10, 11 January 2014
Short description: | p1@ENST00000400540 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENST00000400540_5end |
Coexpression cluster: | C103_CD4_CD8_Natural_Peripheral_Whole_Neutrophils_Basophils |
Association with transcript: | -14bp_to_ENST00000400540_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 3.02e-25 | 18 |
alpha-beta T cell | 3.02e-25 | 18 |
immature T cell | 3.02e-25 | 18 |
mature T cell | 3.02e-25 | 18 |
immature alpha-beta T cell | 3.02e-25 | 18 |
naive T cell | 1.68e-23 | 3 |
CD4-positive, alpha-beta T cell | 2.40e-20 | 6 |
T cell | 6.92e-18 | 25 |
pro-T cell | 6.92e-18 | 25 |
regulatory T cell | 1.48e-16 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.48e-16 | 2 |
naive regulatory T cell | 1.48e-16 | 2 |
CD8-positive, alpha-beta T cell | 7.62e-11 | 11 |
CD4-positive, alpha-beta thymocyte | 1.05e-08 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 1.05e-08 | 1 |
mature CD4 single-positive thymocyte | 1.05e-08 | 1 |
resting double-positive thymocyte | 1.05e-08 | 1 |
double-positive blast | 1.05e-08 | 1 |
CD69-positive double-positive thymocyte | 1.05e-08 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 1.05e-08 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 1.05e-08 | 1 |
CD24-positive, CD4 single-positive thymocyte | 1.05e-08 | 1 |
lymphoid lineage restricted progenitor cell | 4.88e-08 | 52 |
lymphocyte | 7.25e-08 | 53 |
common lymphoid progenitor | 7.25e-08 | 53 |
Ontology term | p-value | n |
---|---|---|
blood | 3.09e-12 | 15 |
haemolymphatic fluid | 3.09e-12 | 15 |
organism substance | 3.09e-12 | 15 |